RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-223	ENST00000600523	HSD11B1	P28845	292 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	ATP6V1E1	P36543	226 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	LIPA	P38571	399 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	SLC6A9	P48067	706 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	GRB2	P62993	217 aa	Known RBP	11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	MALL	Q13021	153 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	TRIP10	Q15642	601 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	SWI5	Q1ZZU3	235 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	ZMAT1	Q5H9K5	638 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523		Q5PR19	223 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	NXNL2	Q5VZ03	156 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	C11orf71	Q6IPW1	123 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	CFAP77	Q6ZQR2	320 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	DPY19L4	Q7Z388	723 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	ZNF555	Q8NEP9	628 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	IGFBPL1	Q8WX77	278 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	RDH12	Q96NR8	316 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	IL4I1	Q96RQ9	567 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	SYT3	Q9BQG1	590 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	HCAR1	Q9BXC0	346 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	TOR3A	Q9H497	397 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	CYSLTR2	Q9NS75	346 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	CGGBP1	Q9UFW8	167 aa	Predicted RBP	11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	LAMP5	Q9UJQ1	280 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	TMEM14A	Q9Y6G1	99 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	ROS1	P08922	2347 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	AKAP6	Q13023	2319 aa		11.2	□□□□□ -0.62
SRRM1-223	ENST00000600523	MPZL2	O60487	215 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	LYN	P07948	512 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	CSF3	P09919	207 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	ZNF250	P15622	560 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	EPHA2	P29317	976 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	WNT5A	P41221	380 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	RPS27	P42677	84 aa	Known RBP	11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	EFNA4	P52798	201 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	DSCR9	P59020	149 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	POU4F2	Q12837	409 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	PCK2	Q16822	640 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	ZIK1	Q3SY52	487 aa	Predicted RBP	11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	LINC01590	Q5TEZ4	76 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	KCTD18	Q6PI47	426 aa	Predicted RBP	11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	SPNS3	Q6ZMD2	512 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	RHOU	Q7L0Q8	258 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	MEPCE	Q7L2J0	689 aa	Known RBP	11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	SLC16A9	Q7RTY1	509 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	PACRGL	Q8N7B6	248 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	FAM81A	Q8TBF8	368 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	ZNRF4	Q8WWF5	429 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	SLAMF6	Q96DU3	332 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	MAP6	Q96JE9	813 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	HRASLS5	Q96KN8	279 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	CNN2	Q99439	309 aa	Known RBP	11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	TEAD3	Q99594	435 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	DOK1	Q99704	481 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	MRPL37	Q9BZE1	423 aa	Known RBP	11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	YIPF3	Q9GZM5	350 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	MYOZ1	Q9NP98	299 aa	Predicted RBP	11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	DDX28	Q9NUL7	540 aa	Known RBP	11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	TAAR3P	Q9P1P4	343 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	FZR1	Q9UM11	496 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	GMPPB	Q9Y5P6	360 aa		11.19	□□□□□ -0.62
SRRM1-223	ENST00000600523	TACC2	O95359	2948 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523		M0R135	149 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	PHYH	O14832	338 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	TIMM8A	O60220	97 aa	Predicted RBP	11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	LCAT	P04180	440 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	ADRA2A	P08913	450 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	H2BFM	P0C1H6	154 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	POLR2I	P36954	125 aa	Known RBP	11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	NAA10	P41227	235 aa	Predicted RBP	11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	DBP	Q10586	325 aa	Predicted RBP	11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	TMED1	Q13445	227 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	LRRC36	Q1X8D7	754 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	MST1L	Q2TV78	715 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	PCGF3	Q3KNV8	242 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	SPATA46	Q5T0L3	261 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	MEDAG	Q5VYS4	303 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	MBNL2	Q5VZF2	373 aa	Known RBP	11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	CLEC2A	Q6UVW9	174 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	LYPD4	Q6UWN0	246 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	DRAM2	Q6UX65	266 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	RFPL4B	Q6ZWI9	263 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	TIGD4	Q8IY51	512 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	ZNF101	Q8IZC7	436 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	BBS1	Q8NFJ9	593 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	OTOS	Q8NHW6	89 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	SLC25A40	Q8TBP6	338 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	KLF14	Q8TD94	323 aa	Predicted RBP	11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	THEM6	Q8WUY1	208 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	NEU4	Q8WWR8	484 aa	Predicted RBP	11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	SLC7A6	Q92536	515 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	ZNF799	Q96GE5	643 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523		Q96MT0	163 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	MNT	Q99583	582 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	KCNJ15	Q99712	375 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	APOL4	Q9BPW4	351 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	OR2J1	Q9GZK6	312 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	MARCH7	Q9H992	704 aa		11.18	□□□□□ -0.62
SRRM1-223	ENST00000600523	SMPD3	Q9NY59	655 aa	Predicted RBP	11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms