RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 OR7E24Q6IFN5 339 aa11.23□□□□□ -0.61
ZNF548-210ENST00000600442 TMEM53Q6P2H8 277 aa11.23□□□□□ -0.61
ZNF548-210ENST00000600442 CORO6Q6QEF8 472 aa11.23□□□□□ -0.61
ZNF548-210ENST00000600442 SPATC1Q76KD6 591 aa11.23□□□□□ -0.61
ZNF548-210ENST00000600442 ADGRE4PQ86SQ3 457 aa11.23□□□□□ -0.61
ZNF548-210ENST00000600442 RFLNBQ8N5W9 214 aa11.23□□□□□ -0.61
ZNF548-210ENST00000600442 NDNFQ8TB73 568 aa11.23□□□□□ -0.61
ZNF548-210ENST00000600442 FAM57AQ8TBR7 257 aa11.23□□□□□ -0.61
ZNF548-210ENST00000600442 RPL3LQ92901 407 aaKnown RBP11.23□□□□□ -0.61
ZNF548-210ENST00000600442 ATF6BQ99941 703 aa11.23□□□□□ -0.61
ZNF548-210ENST00000600442 TP63Q9H3D4 680 aaPredicted RBP11.23□□□□□ -0.61
ZNF548-210ENST00000600442 RNF121Q9H920 327 aa11.23□□□□□ -0.61
ZNF548-210ENST00000600442 SLC7A10Q9NS82 523 aa11.23□□□□□ -0.61
ZNF548-210ENST00000600442 CCDC59Q9P031 241 aaKnown RBP11.23□□□□□ -0.61
ZNF548-210ENST00000600442 ING1Q9UK53 422 aaPredicted RBP11.23□□□□□ -0.61
ZNF548-210ENST00000600442 LHFPL6Q9Y693 200 aa11.23□□□□□ -0.61
ZNF548-210ENST00000600442 A3GALT2U3KPV4 340 aa11.23□□□□□ -0.61
ZNF548-210ENST00000600442 LRBAP50851 2863 aa11.23□□□□□ -0.61
ZNF548-210ENST00000600442 CNTRLQ7Z7A1 2325 aa11.23□□□□□ -0.61
ZNF548-210ENST00000600442 MAGEB4O15481 346 aaPredicted RBP11.22□□□□□ -0.61
ZNF548-210ENST00000600442 CLPXO76031 633 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 AGFG2O95081 481 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 ABHD16AO95870 558 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 CD8BP10966 210 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 ZNF182P17025 639 aaPredicted RBP11.22□□□□□ -0.61
ZNF548-210ENST00000600442 HOXC12P31275 282 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 S100A5P33763 92 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 MTNR1BP49286 362 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 FAPQ12884 760 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 RAB35Q15286 201 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 ELFN2Q5R3F8 820 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 PHYHD1Q5SRE7 291 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 C1orf185Q5T7R7 199 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 ANKRD16Q6P6B7 361 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 GFRALQ6UXV0 394 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 RPTNQ6XPR3 784 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 WDFY1Q8IWB7 410 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 LRRC18Q8N456 261 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 CISD2Q8N5K1 135 aaKnown RBP11.22□□□□□ -0.61
ZNF548-210ENST00000600442 CNEP1R1Q8N9A8 125 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 CCDC54Q8NEL0 328 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 C4orf45Q96LM5 186 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 KCNJ15Q99712 375 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 MMP27Q9H306 513 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 C12orf49Q9H741 205 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 MOV10Q9HCE1 1003 aaKnown RBP11.22□□□□□ -0.61
ZNF548-210ENST00000600442 DDX28Q9NUL7 540 aaKnown RBP11.22□□□□□ -0.61
ZNF548-210ENST00000600442 PLEK2Q9NYT0 353 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 FRRS1LQ9P0K9 344 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 MALT1Q9UDY8 824 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 OR52A1Q9UKL2 312 aa11.22□□□□□ -0.61
ZNF548-210ENST00000600442 SF3B6Q9Y3B4 125 aaKnown RBP11.22□□□□□ -0.61
ZNF548-210ENST00000600442 OR6C6A6NF89 314 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 SGCEO43556 437 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 TMEM127O75204 238 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 ZFPL1O95159 310 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 UBL3O95164 117 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 CDRT1O95170 752 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 OCM2P0CE71 109 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 HOXB1P14653 301 aaPredicted RBP11.21□□□□□ -0.61
ZNF548-210ENST00000600442 B4GALT1P15291 398 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 GNLYP22749 145 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 CTSSP25774 331 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 CALRP27797 417 aaKnown RBP11.21□□□□□ -0.61
ZNF548-210ENST00000600442 TPTEP56180 551 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 PSMA6P60900 246 aaKnown RBP11.21□□□□□ -0.61
ZNF548-210ENST00000600442 ARF1P84077 181 aaKnown RBP11.21□□□□□ -0.61
ZNF548-210ENST00000600442 LSAMPQ13449 338 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 ZNF404Q494X3 552 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 Q499Y3 187 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 HSD17B12Q53GQ0 312 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 ZMAT1Q5H9K5 638 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 ZNF627Q7L945 461 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.21□□□□□ -0.61
ZNF548-210ENST00000600442 ZNF283Q8N7M2 679 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 MCFD2Q8NI22 146 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 DYNC2LI1Q8TCX1 351 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 RPS4Y2Q8TD47 263 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 TSEN15Q8WW01 171 aaKnown RBP11.21□□□□□ -0.61
ZNF548-210ENST00000600442 NABP1Q96AH0 204 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 MAP6Q96JE9 813 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 SNTG1Q9NSN8 517 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 LUZP4Q9P127 313 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 ATPIF1Q9UII2 106 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 FBXL3Q9UKT7 428 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 HHLA2Q9UM44 414 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 PROCRQ9UNN8 238 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 DHDHQ9UQ10 334 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 GRIP1Q9Y3R0 1128 aa11.21□□□□□ -0.61
ZNF548-210ENST00000600442 TRAV1-2A0A0B4J238 106 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 A0A1B0GVI7 797 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 MBD3L4A6NDZ8 208 aaPredicted RBP11.2□□□□□ -0.62
ZNF548-210ENST00000600442 MBD3L3A6NE82 208 aaPredicted RBP11.2□□□□□ -0.62
ZNF548-210ENST00000600442 MBD3L5A6NJ08 208 aaPredicted RBP11.2□□□□□ -0.62
ZNF548-210ENST00000600442 TTLL8A6PVC2 850 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 RER1O15258 196 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 IGHV3-9P01782 118 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 ISG15P05161 165 aa11.2□□□□□ -0.62
ZNF548-210ENST00000600442 TMIGD3P0DMS9 266 aaPredicted RBP11.2□□□□□ -0.62
ZNF548-210ENST00000600442 PAX7P23759 505 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms