RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 NANOGP1Q8N7R0 232 aa11.05□□□□□ -0.64
UPF1-208ENST00000600012 C11orf40Q8WZ69 217 aa11.05□□□□□ -0.64
UPF1-208ENST00000600012 RORBQ92753 470 aa11.05□□□□□ -0.64
UPF1-208ENST00000600012 FBXW5Q969U6 566 aa11.05□□□□□ -0.64
UPF1-208ENST00000600012 APH1AQ96BI3 265 aa11.05□□□□□ -0.64
UPF1-208ENST00000600012 S100PBPQ96BU1 408 aa11.05□□□□□ -0.64
UPF1-208ENST00000600012 TRMT61AQ96FX7 289 aaKnown RBP11.05□□□□□ -0.64
UPF1-208ENST00000600012 MND1Q9BWT6 205 aa11.05□□□□□ -0.64
UPF1-208ENST00000600012 GP6Q9HCN6 339 aa11.05□□□□□ -0.64
UPF1-208ENST00000600012 EMC7Q9NPA0 242 aa11.05□□□□□ -0.64
UPF1-208ENST00000600012 NGBQ9NPG2 151 aa11.05□□□□□ -0.64
UPF1-208ENST00000600012 B3GAT2Q9NPZ5 323 aa11.05□□□□□ -0.64
UPF1-208ENST00000600012 SLC7A10Q9NS82 523 aa11.05□□□□□ -0.64
UPF1-208ENST00000600012 PRSS50Q9UI38 385 aa11.05□□□□□ -0.64
UPF1-208ENST00000600012 KCNG2Q9UJ96 466 aa11.05□□□□□ -0.64
UPF1-208ENST00000600012 ERGIC3Q9Y282 383 aa11.05□□□□□ -0.64
UPF1-208ENST00000600012 LSM2Q9Y333 95 aaKnown RBP11.05□□□□□ -0.64
UPF1-208ENST00000600012 TMEM129A0AVI4 362 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 ZNF99A8MXY4 864 aaPredicted RBP11.04□□□□□ -0.64
UPF1-208ENST00000600012 PRR32B1ATL7 298 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 ZNF670-ZNF695F2Z2N8 137 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 OVOL3O00110 214 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 MAGEB4O15481 346 aaPredicted RBP11.04□□□□□ -0.64
UPF1-208ENST00000600012 OR2T7P0C7T2 308 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 ZNF823P16415 610 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 ZNF84P51523 738 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 ROR2Q01974 943 aaKnown RBP11.04□□□□□ -0.64
UPF1-208ENST00000600012 RAB39AQ14964 217 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 MED22Q15528 200 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 CEACAM16Q2WEN9 425 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 UBE2UQ5VVX9 321 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 TFAP2EQ6VUC0 442 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 ZNF367Q7RTV3 350 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 LINC00346Q8IVM7 164 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 ZNF100Q8IYN0 542 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 GABRG1Q8N1C3 465 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 KLHL36Q8N4N3 616 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 OR10H5Q8NGA6 315 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 OR2T27Q8NH04 317 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 SPRYD4Q8WW59 207 aaPredicted RBP11.04□□□□□ -0.64
UPF1-208ENST00000600012 FCGR1BQ92637 280 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 USB1Q9BQ65 265 aaKnown RBP11.04□□□□□ -0.64
UPF1-208ENST00000600012 REPIN1Q9BWE0 567 aaKnown RBP11.04□□□□□ -0.64
UPF1-208ENST00000600012 LINC00470Q9BZP3 86 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 YIPF3Q9GZM5 350 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 ESRP2Q9H6T0 727 aaKnown RBP11.04□□□□□ -0.64
UPF1-208ENST00000600012 ISG20L2Q9H9L3 353 aaKnown RBP11.04□□□□□ -0.64
UPF1-208ENST00000600012 CRLF2Q9HC73 371 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 GPR35Q9HC97 309 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 INPP5EQ9NRR6 644 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 PARPBPQ9NWS1 579 aa11.04□□□□□ -0.64
UPF1-208ENST00000600012 DPPA5A6NC42 116 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 RNF223E7ERA6 249 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 PSMD9O00233 223 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 ZNF593O00488 134 aaPredicted RBP11.03□□□□□ -0.64
UPF1-208ENST00000600012 KRT33AO76009 404 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 WNT11O96014 354 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 CD3EP07766 207 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 HSMCR30P0CW71 290 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 IL32P24001 234 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 OR3A2P47893 321 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 FOXG1P55316 489 aaPredicted RBP11.03□□□□□ -0.64
UPF1-208ENST00000600012 WNT4P56705 351 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 EIF2B1Q14232 305 aaKnown RBP11.03□□□□□ -0.64
UPF1-208ENST00000600012 GALEQ14376 348 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 SGCAQ16586 387 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 TIGD6Q17RP2 521 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 TP53I3Q53FA7 332 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 NCMAPQ5T1S8 102 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 SFRP5Q5T4F7 317 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 C9orf135Q5VTT2 229 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 ALKBH2Q6NS38 261 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 CORO6Q6QEF8 472 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 ZNF322Q6U7Q0 402 aaPredicted RBP11.03□□□□□ -0.64
UPF1-208ENST00000600012 FOXL2NBQ6ZUU3 175 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 LILRB1Q8NHL6 650 aaPredicted RBP11.03□□□□□ -0.64
UPF1-208ENST00000600012 OTOSQ8NHW6 89 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 GATAD2BQ8WXI9 593 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 NABP1Q96AH0 204 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 AMELYQ99218 206 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 POLE4Q9NR33 117 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 UPB1Q9UBR1 384 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 LAMP5Q9UJQ1 280 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 POLR1DQ9Y2S0 133 aa11.03□□□□□ -0.64
UPF1-208ENST00000600012 ZNF587BE7ETH6 402 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 J3QLW9 94 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 LALBAP00709 142 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 SOD3P08294 240 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 DANCRP0C864 163 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 OR8G3PP0DMU2 310 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 ZNF19P17023 458 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 MSR1P21757 451 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 OR12D2P58182 307 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 FAPQ12884 760 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 P2RY6Q15077 328 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 SPHARQ15513 63 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 TAB1Q15750 504 aa11.02□□□□□ -0.65
UPF1-208ENST00000600012 TSTQ16762 297 aaKnown RBP11.02□□□□□ -0.65
UPF1-208ENST00000600012 SYT6Q5T7P8 510 aaPredicted RBP11.02□□□□□ -0.65
UPF1-208ENST00000600012 SPATC1Q76KD6 591 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms