RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 STARD10Q9Y365 291 aa24.1■■□□□ 1.45
SSBP4-206ENST00000599699 C17orf100A8MU93 164 aa24.09■■□□□ 1.45
SSBP4-206ENST00000599699 LYNX1G3V0Z9 82 aa24.09■■□□□ 1.45
SSBP4-206ENST00000599699 HMGN1P05114 100 aa24.09■■□□□ 1.45
SSBP4-206ENST00000599699 LYNX1P0DP58 116 aa24.09■■□□□ 1.45
SSBP4-206ENST00000599699 ZNF23P17027 643 aa24.09■■□□□ 1.45
SSBP4-206ENST00000599699 RPS27P42677 84 aaKnown RBP24.09■■□□□ 1.45
SSBP4-206ENST00000599699 RGS6P49758 472 aa24.09■■□□□ 1.45
SSBP4-206ENST00000599699 ECH1Q13011 328 aa24.09■■□□□ 1.45
SSBP4-206ENST00000599699 GGTLC2Q14390 218 aa24.09■■□□□ 1.45
SSBP4-206ENST00000599699 ZNF786Q8N393 782 aa24.09■■□□□ 1.45
SSBP4-206ENST00000599699 ZNF540Q8NDQ6 660 aa24.09■■□□□ 1.45
SSBP4-206ENST00000599699 LRTOMTQ8WZ04 291 aa24.09■■□□□ 1.45
SSBP4-206ENST00000599699 GTF3AQ92664 365 aaKnown RBP24.09■■□□□ 1.45
SSBP4-206ENST00000599699 PLEKHA8Q96JA3 519 aa24.09■■□□□ 1.45
SSBP4-206ENST00000599699 COG8Q96MW5 612 aa24.09■■□□□ 1.45
SSBP4-206ENST00000599699 ATF6BQ99941 703 aa24.09■■□□□ 1.45
SSBP4-206ENST00000599699 POFUT1Q9H488 388 aa24.09■■□□□ 1.45
SSBP4-206ENST00000599699 WDR76Q9H967 626 aa24.09■■□□□ 1.45
SSBP4-206ENST00000599699 COMMD3-BMI1R4GMX3 469 aa24.09■■□□□ 1.45
SSBP4-206ENST00000599699 CSPG4Q6UVK1 2322 aa24.09■■□□□ 1.45
SSBP4-206ENST00000599699 TPD52L2O43399 206 aaKnown RBP24.08■■□□□ 1.45
SSBP4-206ENST00000599699 TIMM8AO60220 97 aaPredicted RBP24.08■■□□□ 1.45
SSBP4-206ENST00000599699 HPXP02790 462 aa24.08■■□□□ 1.45
SSBP4-206ENST00000599699 SPARCP09486 303 aa24.08■■□□□ 1.45
SSBP4-206ENST00000599699 USF1P22415 310 aaPredicted RBP24.08■■□□□ 1.45
SSBP4-206ENST00000599699 TUBG1P23258 451 aa24.08■■□□□ 1.45
SSBP4-206ENST00000599699 NR4A2P43354 598 aa24.08■■□□□ 1.45
SSBP4-206ENST00000599699 MAGEB1P43366 347 aa24.08■■□□□ 1.45
SSBP4-206ENST00000599699 DAPP51397 102 aa24.08■■□□□ 1.45
SSBP4-206ENST00000599699 ZNF81P51508 661 aa24.08■■□□□ 1.45
SSBP4-206ENST00000599699 BLVRAP53004 296 aa24.08■■□□□ 1.45
SSBP4-206ENST00000599699 PCGF3Q3KNV8 242 aa24.08■■□□□ 1.45
SSBP4-206ENST00000599699 FAHD1Q6P587 224 aa24.08■■□□□ 1.45
SSBP4-206ENST00000599699 ZDHHC13Q8IUH4 622 aa24.08■■□□□ 1.45
SSBP4-206ENST00000599699 OR51V1Q9H2C8 321 aa24.08■■□□□ 1.45
SSBP4-206ENST00000599699 TUBG2Q9NRH3 451 aa24.08■■□□□ 1.45
SSBP4-206ENST00000599699 PRR23D1E9PI22 279 aaPredicted RBP24.07■■□□□ 1.44
SSBP4-206ENST00000599699 F5H5K5 113 aa24.07■■□□□ 1.44
SSBP4-206ENST00000599699 PRR23D2P0DMB1 279 aaPredicted RBP24.07■■□□□ 1.44
SSBP4-206ENST00000599699 ENTPD1P49961 510 aa24.07■■□□□ 1.44
SSBP4-206ENST00000599699 CCL8P80075 99 aa24.07■■□□□ 1.44
SSBP4-206ENST00000599699 CDK5Q00535 292 aa24.07■■□□□ 1.44
SSBP4-206ENST00000599699 LOXL1Q08397 574 aaPredicted RBP24.07■■□□□ 1.44
SSBP4-206ENST00000599699 TMEM236Q5W0B7 351 aa24.07■■□□□ 1.44
SSBP4-206ENST00000599699 OR5L1Q8NGL2 311 aa24.07■■□□□ 1.44
SSBP4-206ENST00000599699 MAP6Q96JE9 813 aa24.07■■□□□ 1.44
SSBP4-206ENST00000599699 HCAR1Q9BXC0 346 aa24.07■■□□□ 1.44
SSBP4-206ENST00000599699 KRT84Q9NSB2 600 aa24.07■■□□□ 1.44
SSBP4-206ENST00000599699 TLN2Q9Y4G6 2542 aa24.06■■□□□ 1.44
SSBP4-206ENST00000599699 A0A096LNT2 108 aa24.06■■□□□ 1.44
SSBP4-206ENST00000599699 VWC2LB2RUY7 222 aa24.06■■□□□ 1.44
SSBP4-206ENST00000599699 ZNF593O00488 134 aaPredicted RBP24.06■■□□□ 1.44
SSBP4-206ENST00000599699 SURF4O15260 269 aa24.06■■□□□ 1.44
SSBP4-206ENST00000599699 CRISP1P54107 249 aa24.06■■□□□ 1.44
SSBP4-206ENST00000599699 PSG7Q13046 419 aa24.06■■□□□ 1.44
SSBP4-206ENST00000599699 TSTQ16762 297 aaKnown RBP24.06■■□□□ 1.44
SSBP4-206ENST00000599699 TMEM255AQ5JRV8 349 aa24.06■■□□□ 1.44
SSBP4-206ENST00000599699 PLBD1Q6P4A8 553 aa24.06■■□□□ 1.44
SSBP4-206ENST00000599699 DCXRQ7Z4W1 244 aa24.06■■□□□ 1.44
SSBP4-206ENST00000599699 PYDC1Q8WXC3 89 aa24.06■■□□□ 1.44
SSBP4-206ENST00000599699 RDH5Q92781 318 aa24.06■■□□□ 1.44
SSBP4-206ENST00000599699 APOBEC3DQ96AK3 386 aaPredicted RBP24.06■■□□□ 1.44
SSBP4-206ENST00000599699 CMBLQ96DG6 245 aa24.06■■□□□ 1.44
SSBP4-206ENST00000599699 BPESC1Q9GZL8 116 aa24.06■■□□□ 1.44
SSBP4-206ENST00000599699 SEMA6AQ9H2E6 1030 aa24.06■■□□□ 1.44
SSBP4-206ENST00000599699 CYSLTR2Q9NS75 346 aa24.06■■□□□ 1.44
SSBP4-206ENST00000599699 DECR2Q9NUI1 292 aa24.06■■□□□ 1.44
SSBP4-206ENST00000599699 PTTG3PQ9NZH4 202 aa24.06■■□□□ 1.44
SSBP4-206ENST00000599699 SPRY3O43610 288 aa24.05■■□□□ 1.44
SSBP4-206ENST00000599699 NCR1O76036 304 aa24.05■■□□□ 1.44
SSBP4-206ENST00000599699 RIPPLY3P57055 190 aa24.05■■□□□ 1.44
SSBP4-206ENST00000599699 KPNB1Q14974 876 aaKnown RBP24.05■■□□□ 1.44
SSBP4-206ENST00000599699 PTP4A1Q93096 173 aa24.05■■□□□ 1.44
SSBP4-206ENST00000599699 SLC25A19Q9HC21 320 aa24.05■■□□□ 1.44
SSBP4-206ENST00000599699 PNRC2Q9NPJ4 139 aaKnown RBP24.05■■□□□ 1.44
SSBP4-206ENST00000599699 J3QW42 95 aa24.04■■□□□ 1.44
SSBP4-206ENST00000599699 COL8A2P25067 703 aa24.04■■□□□ 1.44
SSBP4-206ENST00000599699 GIFP27352 417 aa24.04■■□□□ 1.44
SSBP4-206ENST00000599699 GSTT1P30711 240 aa24.04■■□□□ 1.44
SSBP4-206ENST00000599699 LIPAP38571 399 aa24.04■■□□□ 1.44
SSBP4-206ENST00000599699 MMP15P51511 669 aa24.04■■□□□ 1.44
SSBP4-206ENST00000599699 ACTR3P61158 418 aa24.04■■□□□ 1.44
SSBP4-206ENST00000599699 RSPO1Q2MKA7 263 aaPredicted RBP24.04■■□□□ 1.44
SSBP4-206ENST00000599699 ZMAT1Q5H9K5 638 aa24.04■■□□□ 1.44
SSBP4-206ENST00000599699 ERI1Q8IV48 349 aaKnown RBP24.04■■□□□ 1.44
SSBP4-206ENST00000599699 PARP8Q8N3A8 854 aa24.04■■□□□ 1.44
SSBP4-206ENST00000599699 SPTSSAQ969W0 71 aa24.04■■□□□ 1.44
SSBP4-206ENST00000599699 NKIRAS2Q9NYR9 191 aa24.04■■□□□ 1.44
SSBP4-206ENST00000599699 TVP23BQ9NYZ1 205 aa24.04■■□□□ 1.44
SSBP4-206ENST00000599699 CGGBP1Q9UFW8 167 aaPredicted RBP24.04■■□□□ 1.44
SSBP4-206ENST00000599699 PURGQ9UJV8 347 aaKnown RBP24.04■■□□□ 1.44
SSBP4-206ENST00000599699 MITFO75030 526 aaPredicted RBP24.03■■□□□ 1.44
SSBP4-206ENST00000599699 GLCEO94923 617 aa24.03■■□□□ 1.44
SSBP4-206ENST00000599699 ACSM4P0C7M7 580 aa24.03■■□□□ 1.44
SSBP4-206ENST00000599699 PSKH1P11801 424 aa24.03■■□□□ 1.44
SSBP4-206ENST00000599699 TPTEP56180 551 aa24.03■■□□□ 1.44
SSBP4-206ENST00000599699 TAF13Q15543 124 aa24.03■■□□□ 1.44
SSBP4-206ENST00000599699 SNAPC1Q16533 368 aa24.03■■□□□ 1.44
SSBP4-206ENST00000599699 TMEM249Q2WGJ8 235 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms