RNA–Protein interactions for RNA: ENST00000598717.5

LTBP4-223, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 811 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-223ENST00000598717 IGKV3-15P01624 115 aa16.78■□□□□ 0.28
LTBP4-223ENST00000598717 MT-ND5P03915 603 aa16.78■□□□□ 0.28
LTBP4-223ENST00000598717 HTR1AP08908 422 aa16.78■□□□□ 0.28
LTBP4-223ENST00000598717 STOMP27105 288 aa16.78■□□□□ 0.28
LTBP4-223ENST00000598717 APEX1P27695 318 aaKnown RBP16.78■□□□□ 0.28
LTBP4-223ENST00000598717 GDI2P50395 445 aaKnown RBP16.78■□□□□ 0.28
LTBP4-223ENST00000598717 ZNF83P51522 516 aa16.78■□□□□ 0.28
LTBP4-223ENST00000598717 OR12D2P58182 307 aa16.78■□□□□ 0.28
LTBP4-223ENST00000598717 GALK2Q01415 458 aa16.78■□□□□ 0.28
LTBP4-223ENST00000598717 SRSF1Q07955 248 aaKnown RBP eCLIP16.78■□□□□ 0.28
LTBP4-223ENST00000598717 SNTB1Q13884 538 aaKnown RBP16.78■□□□□ 0.28
LTBP4-223ENST00000598717 EGFL6Q8IUX8 553 aa16.78■□□□□ 0.28
LTBP4-223ENST00000598717 SYS1Q8N2H4 156 aa16.78■□□□□ 0.28
LTBP4-223ENST00000598717 NANOGP1Q8N7R0 232 aa16.78■□□□□ 0.28
LTBP4-223ENST00000598717 OR1J2Q8NGS2 313 aa16.78■□□□□ 0.28
LTBP4-223ENST00000598717 LINC01560Q8TB33 94 aa16.78■□□□□ 0.28
LTBP4-223ENST00000598717 C4orf36Q96KX1 117 aa16.78■□□□□ 0.28
LTBP4-223ENST00000598717 NIPAL2Q9H841 368 aa16.78■□□□□ 0.28
LTBP4-223ENST00000598717 NPDC1Q9NQX5 325 aaPredicted RBP16.78■□□□□ 0.28
LTBP4-223ENST00000598717 MRM2Q9UI43 246 aaKnown RBP16.78■□□□□ 0.28
LTBP4-223ENST00000598717 ATPIF1Q9UII2 106 aa16.78■□□□□ 0.28
LTBP4-223ENST00000598717 LRP12Q9Y561 859 aa16.78■□□□□ 0.28
LTBP4-223ENST00000598717 F5H5K5 113 aa16.77■□□□□ 0.28
LTBP4-223ENST00000598717 M0R1B8 84 aa16.77■□□□□ 0.28
LTBP4-223ENST00000598717 APOC1P02654 83 aa16.77■□□□□ 0.28
LTBP4-223ENST00000598717 ZNF14P17017 642 aaPredicted RBP16.77■□□□□ 0.28
LTBP4-223ENST00000598717 TPTEP56180 551 aa16.77■□□□□ 0.28
LTBP4-223ENST00000598717 IRF3Q14653 427 aa16.77■□□□□ 0.28
LTBP4-223ENST00000598717 TBC1D28Q2M2D7 210 aa16.77■□□□□ 0.28
LTBP4-223ENST00000598717 ZNF684Q5T5D7 378 aa16.77■□□□□ 0.28
LTBP4-223ENST00000598717 OR2G6Q5TZ20 316 aa16.77■□□□□ 0.28
LTBP4-223ENST00000598717 C22orf34Q6ZV56 151 aa16.77■□□□□ 0.28
LTBP4-223ENST00000598717 ZNF584Q8IVC4 421 aa16.77■□□□□ 0.28
LTBP4-223ENST00000598717 SPARTQ8N0X7 666 aa16.77■□□□□ 0.28
LTBP4-223ENST00000598717 SLC30A7Q8NEW0 376 aa16.77■□□□□ 0.28
LTBP4-223ENST00000598717 OR52N1Q8NH53 320 aa16.77■□□□□ 0.28
LTBP4-223ENST00000598717 SPRYD4Q8WW59 207 aaPredicted RBP16.77■□□□□ 0.28
LTBP4-223ENST00000598717 MS4A3Q96HJ5 214 aa16.77■□□□□ 0.28
LTBP4-223ENST00000598717 ZNF75AQ96N20 296 aa16.77■□□□□ 0.28
LTBP4-223ENST00000598717 KCNJ15Q99712 375 aa16.77■□□□□ 0.28
LTBP4-223ENST00000598717 ISG20L2Q9H9L3 353 aaKnown RBP16.77■□□□□ 0.28
LTBP4-223ENST00000598717 CRNNQ9UBG3 495 aaPredicted RBP16.77■□□□□ 0.28
LTBP4-223ENST00000598717 RPP14O95059 124 aaKnown RBP16.76■□□□□ 0.27
LTBP4-223ENST00000598717 THBDP07204 575 aa16.76■□□□□ 0.27
LTBP4-223ENST00000598717 CELA3BP08861 270 aa16.76■□□□□ 0.27
LTBP4-223ENST00000598717 RNF224P0DH78 156 aa16.76■□□□□ 0.27
LTBP4-223ENST00000598717 CCNOP22674 350 aa16.76■□□□□ 0.27
LTBP4-223ENST00000598717 MAP2K4P45985 399 aa16.76■□□□□ 0.27
LTBP4-223ENST00000598717 PRKXP51817 358 aa16.76■□□□□ 0.27
LTBP4-223ENST00000598717 WNT4P56705 351 aa16.76■□□□□ 0.27
LTBP4-223ENST00000598717 C3orf36Q3SXR2 165 aa16.76■□□□□ 0.27
LTBP4-223ENST00000598717 LIPNQ5VXI9 398 aa16.76■□□□□ 0.27
LTBP4-223ENST00000598717 ZNF283Q8N7M2 679 aa16.76■□□□□ 0.27
LTBP4-223ENST00000598717 GATAD2BQ8WXI9 593 aa16.76■□□□□ 0.27
LTBP4-223ENST00000598717 SLC7A6Q92536 515 aa16.76■□□□□ 0.27
LTBP4-223ENST00000598717 CDH20Q9HBT6 801 aa16.76■□□□□ 0.27
LTBP4-223ENST00000598717 KLF2Q9Y5W3 355 aaPredicted RBP16.76■□□□□ 0.27
LTBP4-223ENST00000598717 IGHV1-18A0A0C4DH31 117 aa16.75■□□□□ 0.27
LTBP4-223ENST00000598717 C5orf49A4QMS7 147 aa16.75■□□□□ 0.27
LTBP4-223ENST00000598717 CASKO14936 926 aa16.75■□□□□ 0.27
LTBP4-223ENST00000598717 IGLV1-44P01699 117 aa16.75■□□□□ 0.27
LTBP4-223ENST00000598717 ATP6V1B1P15313 513 aa16.75■□□□□ 0.27
LTBP4-223ENST00000598717 DCTDP32321 178 aa16.75■□□□□ 0.27
LTBP4-223ENST00000598717 GBX2P52951 348 aaPredicted RBP16.75■□□□□ 0.27
LTBP4-223ENST00000598717 EMX1Q04741 257 aaPredicted RBP16.75■□□□□ 0.27
LTBP4-223ENST00000598717 MRPL28Q13084 256 aaKnown RBP16.75■□□□□ 0.27
LTBP4-223ENST00000598717 MED22Q15528 200 aa16.75■□□□□ 0.27
LTBP4-223ENST00000598717 TBCEQ15813 527 aaPredicted RBP16.75■□□□□ 0.27
LTBP4-223ENST00000598717 ZNF829Q3KNS6 432 aaPredicted RBP16.75■□□□□ 0.27
LTBP4-223ENST00000598717 IL17RDQ8NFM7 739 aa16.75■□□□□ 0.27
LTBP4-223ENST00000598717 HAVCR2Q8TDQ0 301 aa16.75■□□□□ 0.27
LTBP4-223ENST00000598717 POM121L2Q96KW2 1035 aa16.75■□□□□ 0.27
LTBP4-223ENST00000598717 DACH2Q96NX9 599 aa16.75■□□□□ 0.27
LTBP4-223ENST00000598717 DCLRE1CQ96SD1 692 aaKnown RBP16.75■□□□□ 0.27
LTBP4-223ENST00000598717 VCX3AQ9NNX9 186 aa16.75■□□□□ 0.27
LTBP4-223ENST00000598717 ACOXLQ9NUZ1 547 aa16.75■□□□□ 0.27
LTBP4-223ENST00000598717 BABAM2Q9NXR7 383 aa16.75■□□□□ 0.27
LTBP4-223ENST00000598717 NPAP1Q9NZP6 1156 aa16.75■□□□□ 0.27
LTBP4-223ENST00000598717 LOC100509620A0A075B734 347 aa16.74■□□□□ 0.27
LTBP4-223ENST00000598717 TMEM269A0A1B0GVZ9 245 aa16.74■□□□□ 0.27
LTBP4-223ENST00000598717 M0R135 149 aa16.74■□□□□ 0.27
LTBP4-223ENST00000598717 ABHD16AO95870 558 aa16.74■□□□□ 0.27
LTBP4-223ENST00000598717 DBHP09172 617 aa16.74■□□□□ 0.27
LTBP4-223ENST00000598717 CECR9P0C854 216 aa16.74■□□□□ 0.27
LTBP4-223ENST00000598717 CCL2P13500 99 aa16.74■□□□□ 0.27
LTBP4-223ENST00000598717 CRYGSP22914 178 aa16.74■□□□□ 0.27
LTBP4-223ENST00000598717 KIR2DL3P43628 341 aa16.74■□□□□ 0.27
LTBP4-223ENST00000598717 SLC6A9P48067 706 aa16.74■□□□□ 0.27
LTBP4-223ENST00000598717 CX3CR1P49238 355 aa16.74■□□□□ 0.27
LTBP4-223ENST00000598717 SPHARQ15513 63 aa16.74■□□□□ 0.27
LTBP4-223ENST00000598717 ZNF544Q6NX49 715 aa16.74■□□□□ 0.27
LTBP4-223ENST00000598717 ARL9Q6T311 187 aa16.74■□□□□ 0.27
LTBP4-223ENST00000598717 TMEM108Q6UXF1 575 aa16.74■□□□□ 0.27
LTBP4-223ENST00000598717 KLBQ86Z14 1044 aa16.74■□□□□ 0.27
LTBP4-223ENST00000598717 ZNF799Q96GE5 643 aa16.74■□□□□ 0.27
LTBP4-223ENST00000598717 KCNS3Q9BQ31 491 aa16.74■□□□□ 0.27
LTBP4-223ENST00000598717 ACOT13Q9NPJ3 140 aa16.74■□□□□ 0.27
LTBP4-223ENST00000598717 GRIP1Q9Y3R0 1128 aa16.74■□□□□ 0.27
LTBP4-223ENST00000598717 CLEC18AA5D8T8 446 aa16.73■□□□□ 0.27
LTBP4-223ENST00000598717 C19orf84I3L1E1 186 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms