RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 CCT8L2Q96SF2 557 aa13.18□□□□□ -0.3
PPFIA4-208ENST00000597023 GAL3ST1Q99999 423 aa13.18□□□□□ -0.3
PPFIA4-208ENST00000597023 OCEL1Q9H607 264 aa13.18□□□□□ -0.3
PPFIA4-208ENST00000597023 WDR76Q9H967 626 aa13.18□□□□□ -0.3
PPFIA4-208ENST00000597023 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.18□□□□□ -0.3
PPFIA4-208ENST00000597023 COL6A5A8TX70 2615 aa13.17□□□□□ -0.3
PPFIA4-208ENST00000597023 OR6C68A6NDL8 312 aa13.17□□□□□ -0.3
PPFIA4-208ENST00000597023 FAM107AO95990 144 aa13.17□□□□□ -0.3
PPFIA4-208ENST00000597023 AVPP01185 164 aa13.17□□□□□ -0.3
PPFIA4-208ENST00000597023 ADH4P08319 380 aa13.17□□□□□ -0.3
PPFIA4-208ENST00000597023 SBK2P0C263 348 aa13.17□□□□□ -0.3
PPFIA4-208ENST00000597023 PCMT1P22061 227 aa13.17□□□□□ -0.3
PPFIA4-208ENST00000597023 GSSP48637 474 aa13.17□□□□□ -0.3
PPFIA4-208ENST00000597023 CDK5R2Q13319 367 aa13.17□□□□□ -0.3
PPFIA4-208ENST00000597023 OR2T2Q6IF00 324 aa13.17□□□□□ -0.3
PPFIA4-208ENST00000597023 PGM2L1Q6PCE3 622 aa13.17□□□□□ -0.3
PPFIA4-208ENST00000597023 DNM1P34Q6PK57 102 aa13.17□□□□□ -0.3
PPFIA4-208ENST00000597023 GJC3Q8NFK1 279 aa13.17□□□□□ -0.3
PPFIA4-208ENST00000597023 ITLN1Q8WWA0 313 aa13.17□□□□□ -0.3
PPFIA4-208ENST00000597023 PTP4A1Q93096 173 aa13.17□□□□□ -0.3
PPFIA4-208ENST00000597023 HAVCR1Q96D42 359 aa13.17□□□□□ -0.3
PPFIA4-208ENST00000597023 NSL1Q96IY1 281 aa13.17□□□□□ -0.3
PPFIA4-208ENST00000597023 COG8Q96MW5 612 aa13.17□□□□□ -0.3
PPFIA4-208ENST00000597023 METRNQ9UJH8 293 aa13.17□□□□□ -0.3
PPFIA4-208ENST00000597023 TRAV20A0A0B4J274 112 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 IGHV3-64DA0A0J9YX35 117 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 TNFRSF11BO00300 401 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 ARPC3O15145 178 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 IDH3BO43837 385 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 HLA-DQA2P01906 255 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 CD55P08174 381 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 ANPEPP15144 967 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 KITLGP21583 273 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 CALB2P22676 271 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 PYCR1P32322 319 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 HIST1H3AP68431 136 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 TSPAN31Q12999 210 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 RSPO1Q2MKA7 263 aaPredicted RBP13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 ZMAT1Q5H9K5 638 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 HIST2H3PS2Q5TEC6 136 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 LIPNQ5VXI9 398 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 RPL13AP3Q6NVV1 102 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 SHQ1Q6PI26 577 aaKnown RBP13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 ZNF620Q6ZNG0 422 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 CFAP77Q6ZQR2 320 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 C1orf229Q6ZS94 237 aaPredicted RBP13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 HIST2H3AQ71DI3 136 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 NAA40Q86UY6 237 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 ATG16L2Q8NAA4 619 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 CYB561A3Q8NBI2 242 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 CCDC197Q8NCU1 140 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 SLC26A10Q8NG04 563 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 RAB39BQ96DA2 213 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 DIRC2Q96SL1 478 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 BTBD10Q9BSF8 475 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 PLA2G12AQ9BZM1 189 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 G6PC2Q9NQR9 355 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 CGGBP1Q9UFW8 167 aaPredicted RBP13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 LYVE1Q9Y5Y7 322 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 NPTNQ9Y639 398 aa13.16□□□□□ -0.3
PPFIA4-208ENST00000597023 LOC105371242A0A075B767 164 aa13.15□□□□□ -0.3
PPFIA4-208ENST00000597023 TCRBV5S2A0A599 114 aa13.15□□□□□ -0.3
PPFIA4-208ENST00000597023 F5H5K5 113 aa13.15□□□□□ -0.3
PPFIA4-208ENST00000597023 H0YL77 283 aa13.15□□□□□ -0.3
PPFIA4-208ENST00000597023 TCF21O43680 179 aa13.15□□□□□ -0.3
PPFIA4-208ENST00000597023 PNPP00491 289 aa13.15□□□□□ -0.3
PPFIA4-208ENST00000597023 GASTP01350 101 aa13.15□□□□□ -0.3
PPFIA4-208ENST00000597023 TNFSF4P23510 183 aa13.15□□□□□ -0.3
PPFIA4-208ENST00000597023 RPS27P42677 84 aaKnown RBP13.15□□□□□ -0.3
PPFIA4-208ENST00000597023 LCN2P80188 198 aa13.15□□□□□ -0.3
PPFIA4-208ENST00000597023 MS4A2Q01362 244 aa13.15□□□□□ -0.3
PPFIA4-208ENST00000597023 GK3PQ14409 553 aa13.15□□□□□ -0.3
PPFIA4-208ENST00000597023 PEG10Q86TG7 708 aaKnown RBP13.15□□□□□ -0.3
PPFIA4-208ENST00000597023 RFLNBQ8N5W9 214 aa13.15□□□□□ -0.3
PPFIA4-208ENST00000597023 OR10AD1Q8NGE0 317 aa13.15□□□□□ -0.3
PPFIA4-208ENST00000597023 OR8D4Q8NGM9 314 aa13.15□□□□□ -0.3
PPFIA4-208ENST00000597023 ZNRF4Q8WWF5 429 aa13.15□□□□□ -0.3
PPFIA4-208ENST00000597023 OR2V2Q96R30 315 aa13.15□□□□□ -0.3
PPFIA4-208ENST00000597023 PITX2Q99697 317 aa13.15□□□□□ -0.3
PPFIA4-208ENST00000597023 COQ7Q99807 217 aa13.15□□□□□ -0.3
PPFIA4-208ENST00000597023 CDADC1Q9BWV3 514 aa13.15□□□□□ -0.3
PPFIA4-208ENST00000597023 TMEM106BQ9NUM4 274 aa13.15□□□□□ -0.3
PPFIA4-208ENST00000597023 VNN3Q9NY84 501 aa13.15□□□□□ -0.3
PPFIA4-208ENST00000597023 ACTR3BQ9P1U1 418 aa13.15□□□□□ -0.3
PPFIA4-208ENST00000597023 U3KQV3 271 aa13.15□□□□□ -0.3
PPFIA4-208ENST00000597023 TVP23AA6NH52 213 aa13.14□□□□□ -0.31
PPFIA4-208ENST00000597023 RAC2P15153 192 aa13.14□□□□□ -0.31
PPFIA4-208ENST00000597023 ADRA2CP18825 462 aa13.14□□□□□ -0.31
PPFIA4-208ENST00000597023 HMGA2P52926 109 aa13.14□□□□□ -0.31
PPFIA4-208ENST00000597023 SLC3A1Q07837 685 aa13.14□□□□□ -0.31
PPFIA4-208ENST00000597023 COX10Q12887 443 aa13.14□□□□□ -0.31
PPFIA4-208ENST00000597023 SLC18B1Q6NT16 456 aa13.14□□□□□ -0.31
PPFIA4-208ENST00000597023 LYPD4Q6UWN0 246 aa13.14□□□□□ -0.31
PPFIA4-208ENST00000597023 ZBTB46Q86UZ6 589 aa13.14□□□□□ -0.31
PPFIA4-208ENST00000597023 BHLHE23Q8NDY6 225 aa13.14□□□□□ -0.31
PPFIA4-208ENST00000597023 OR51L1Q8NGJ5 315 aa13.14□□□□□ -0.31
PPFIA4-208ENST00000597023 OR4C15Q8NGM1 316 aa13.14□□□□□ -0.31
PPFIA4-208ENST00000597023 OR2AJ1Q8NGZ0 328 aa13.14□□□□□ -0.31
PPFIA4-208ENST00000597023 ZNF420Q8TAQ5 688 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms