RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 TEX15Q9BXT5 2789 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 CCDC182A6NF36 153 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 OR6C6A6NF89 314 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 HTR5AP47898 357 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 NKX6-1P78426 367 aaPredicted RBP16.69■□□□□ 0.26
PNKP-207ENST00000596014 GALK2Q01415 458 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 CDK5R2Q13319 367 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 RAB35Q15286 201 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 ELFN2Q5R3F8 820 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 C20orf204Q6ZNR8 217 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 MEPCEQ7L2J0 689 aaKnown RBP16.69■□□□□ 0.26
PNKP-207ENST00000596014 NUP37Q8NFH4 326 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 OR1F12Q8NHA8 337 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 SMAP2Q8WU79 429 aaPredicted RBP16.69■□□□□ 0.26
PNKP-207ENST00000596014 MAP6Q96JE9 813 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 DHRS9Q9BPW9 319 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 CA10Q9NS85 328 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 SPEF1Q9Y4P9 236 aa16.69■□□□□ 0.26
PNKP-207ENST00000596014 CCDC159P0C7I6 412 aa16.68■□□□□ 0.26
PNKP-207ENST00000596014 MAD2L1BPQ15013 274 aaPredicted RBP16.68■□□□□ 0.26
PNKP-207ENST00000596014 PAMR1Q6UXH9 720 aa16.68■□□□□ 0.26
PNKP-207ENST00000596014 DPY19L4Q7Z388 723 aa16.68■□□□□ 0.26
PNKP-207ENST00000596014 OR6N2Q8NGY6 317 aa16.68■□□□□ 0.26
PNKP-207ENST00000596014 HDHD2Q9H0R4 259 aa16.68■□□□□ 0.26
PNKP-207ENST00000596014 VCX3AQ9NNX9 186 aa16.68■□□□□ 0.26
PNKP-207ENST00000596014 RSL24D1Q9UHA3 163 aaKnown RBP16.68■□□□□ 0.26
PNKP-207ENST00000596014 ST6GALNAC2Q9UJ37 374 aa16.68■□□□□ 0.26
PNKP-207ENST00000596014 H3BSA7 217 aa16.67■□□□□ 0.26
PNKP-207ENST00000596014 DANCRP0C864 163 aa16.67■□□□□ 0.26
PNKP-207ENST00000596014 SNTB2Q13425 540 aaKnown RBP16.67■□□□□ 0.26
PNKP-207ENST00000596014 NEDD8Q15843 81 aa16.67■□□□□ 0.26
PNKP-207ENST00000596014 LCN1P1Q5VSP4 162 aa16.67■□□□□ 0.26
PNKP-207ENST00000596014 ZNF544Q6NX49 715 aa16.67■□□□□ 0.26
PNKP-207ENST00000596014 DCXRQ7Z4W1 244 aa16.67■□□□□ 0.26
PNKP-207ENST00000596014 SLC7A6Q92536 515 aa16.67■□□□□ 0.26
PNKP-207ENST00000596014 PNRC2Q9NPJ4 139 aaKnown RBP16.67■□□□□ 0.26
PNKP-207ENST00000596014 ATPIF1Q9UII2 106 aa16.67■□□□□ 0.26
PNKP-207ENST00000596014 EDARQ9UNE0 448 aa16.67■□□□□ 0.26
PNKP-207ENST00000596014 CCDC168Q8NDH2 2452 aa16.67■□□□□ 0.26
PNKP-207ENST00000596014 SLC22A31A6NKX4 558 aa16.66■□□□□ 0.26
PNKP-207ENST00000596014 SELENOFO60613 162 aa16.66■□□□□ 0.26
PNKP-207ENST00000596014 HTR1AP08908 422 aa16.66■□□□□ 0.26
PNKP-207ENST00000596014 JUNBP17275 347 aaPredicted RBP16.66■□□□□ 0.26
PNKP-207ENST00000596014 PCSK6P29122 969 aa16.66■□□□□ 0.26
PNKP-207ENST00000596014 APOBEC3AP31941 199 aaPredicted RBP16.66■□□□□ 0.26
PNKP-207ENST00000596014 TTKP33981 857 aa16.66■□□□□ 0.26
PNKP-207ENST00000596014 THBS4P35443 961 aa16.66■□□□□ 0.26
PNKP-207ENST00000596014 GLRXP35754 106 aa16.66■□□□□ 0.26
PNKP-207ENST00000596014 FABP6P51161 128 aa16.66■□□□□ 0.26
PNKP-207ENST00000596014 SNRPGP62308 76 aaKnown RBP16.66■□□□□ 0.26
PNKP-207ENST00000596014 VHLLQ6RSH7 139 aa16.66■□□□□ 0.26
PNKP-207ENST00000596014 GID4Q8IVV7 300 aa16.66■□□□□ 0.26
PNKP-207ENST00000596014 SGCDQ92629 289 aa16.66■□□□□ 0.26
PNKP-207ENST00000596014 COQ7Q99807 217 aa16.66■□□□□ 0.26
PNKP-207ENST00000596014 FAIMQ9NVQ4 179 aa16.66■□□□□ 0.26
PNKP-207ENST00000596014 PAK1IP1Q9NWT1 392 aaPredicted RBP16.66■□□□□ 0.26
PNKP-207ENST00000596014 PLEKHA6Q9Y2H5 1048 aa16.66■□□□□ 0.26
PNKP-207ENST00000596014 SOD3P08294 240 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 FAM157BP0CG42 384 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 WNT5AP41221 380 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 NAA10P41227 235 aaPredicted RBP16.65■□□□□ 0.26
PNKP-207ENST00000596014 UCP2P55851 309 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 SHFQ7M4L6 423 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 BPIFB6Q8NFQ5 453 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 OR10S1Q8NGN2 331 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 ST7LQ8TDW4 575 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 ZNF582Q96NG8 517 aaPredicted RBP16.65■□□□□ 0.26
PNKP-207ENST00000596014 ATF6BQ99941 703 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 OR51B6Q9H340 312 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 ZNF442Q9H7R0 627 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 DNAJC27Q9NZQ0 273 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 EIF3KQ9UBQ5 218 aaKnown RBP16.65■□□□□ 0.26
PNKP-207ENST00000596014 LAMP3Q9UQV4 416 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 GPRIN2O60269 458 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 ICMTO60725 284 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 ATE1O95260 518 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 RAF1P04049 648 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 DBHP09172 617 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 RAD52P43351 418 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 CXCR4P61073 352 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 ECH1Q13011 328 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 EIF2B1Q14232 305 aaKnown RBP16.65■□□□□ 0.26
PNKP-207ENST00000596014 GGTLC2Q14390 218 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 ADIPOQQ15848 244 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 RSPO1Q2MKA7 263 aaPredicted RBP16.65■□□□□ 0.26
PNKP-207ENST00000596014 SLC25A30Q5SVS4 291 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 SLC16A9Q7RTY1 509 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 CDH24Q86UP0 819 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 CLVS1Q8IUQ0 354 aaPredicted RBP16.65■□□□□ 0.26
PNKP-207ENST00000596014 ZNF101Q8IZC7 436 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 MUC15Q8N387 334 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 OTOSQ8NHW6 89 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 TMEM171Q8WVE6 324 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 C4orf45Q96LM5 186 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 ABHD6Q9BV23 337 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 HAO2Q9NYQ3 351 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 SNX5Q9Y5X3 404 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 USF3Q68DE3 2245 aa16.65■□□□□ 0.26
PNKP-207ENST00000596014 MAP1AP78559 2803 aaPredicted RBP16.64■□□□□ 0.26
PNKP-207ENST00000596014 VSTM5A8MXK1 200 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms