RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 H7C2Y5 167 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 CCSO14618 274 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 EFSO43281 561 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 OR2T1O43869 369 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 SEMA4FO95754 770 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 CRHP06850 196 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 CA3P07451 260 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 DCNP07585 359 aaKnown RBP11.85□□□□□ -0.51
VRK3-209ENST00000594948 ZNF823P16415 610 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 PSMB6P28072 239 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 IL12BP29460 328 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 BDKRB2P30411 391 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 HOXA1P49639 335 aaPredicted RBP11.85□□□□□ -0.51
VRK3-209ENST00000594948 SLC26A5P58743 744 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 SPOCK1Q08629 439 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 TDGQ13569 410 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 C1orf140Q5VVS0 124 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 C1QL3Q5VWW1 255 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 PGAP1Q75T13 922 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 GRINAQ7Z429 371 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 ZNF321PQ8N8H1 164 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 SLC26A10Q8NG04 563 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 OR5AP2Q8NGF4 316 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 OR4D6Q8NGJ1 314 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 ZNF721Q8TF20 911 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 SLC25A36Q96CQ1 311 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 SEC22AQ96IW7 307 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 RTN4RQ9BZR6 473 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 SLC39A1Q9NY26 324 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 SHPKQ9UHJ6 478 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 ANAPC10Q9UM13 185 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 EMC9Q9Y3B6 208 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 TMEM184BQ9Y519 407 aaPredicted RBP11.85□□□□□ -0.51
VRK3-209ENST00000594948 FREM3P0C091 2139 aa11.85□□□□□ -0.51
VRK3-209ENST00000594948 IGKV3D-11A0A0A0MRZ8 115 aa11.84□□□□□ -0.51
VRK3-209ENST00000594948 WIPF3A6NGB9 483 aa11.84□□□□□ -0.51
VRK3-209ENST00000594948 ZNF208O43345 1280 aa11.84□□□□□ -0.51
VRK3-209ENST00000594948 AHSA1O95433 338 aa11.84□□□□□ -0.51
VRK3-209ENST00000594948 DDAH2O95865 285 aa11.84□□□□□ -0.51
VRK3-209ENST00000594948 PLGP00747 810 aaPredicted RBP11.84□□□□□ -0.51
VRK3-209ENST00000594948 DRD1P21728 446 aa11.84□□□□□ -0.51
VRK3-209ENST00000594948 MAOBP27338 520 aa11.84□□□□□ -0.51
VRK3-209ENST00000594948 CAPZBP47756 277 aa11.84□□□□□ -0.51
VRK3-209ENST00000594948 BLKP51451 505 aa11.84□□□□□ -0.51
VRK3-209ENST00000594948 MMP16P51512 607 aa11.84□□□□□ -0.51
VRK3-209ENST00000594948 PNLIPRP2P54317 469 aa11.84□□□□□ -0.51
VRK3-209ENST00000594948 QRFPP83859 136 aa11.84□□□□□ -0.51
VRK3-209ENST00000594948 FZD2Q14332 565 aa11.84□□□□□ -0.51
VRK3-209ENST00000594948 MICBQ29980 383 aa11.84□□□□□ -0.51
VRK3-209ENST00000594948 HFEQ30201 348 aa11.84□□□□□ -0.51
VRK3-209ENST00000594948 DHRS7BQ6IAN0 325 aaPredicted RBP11.84□□□□□ -0.51
VRK3-209ENST00000594948 OR4K17Q8NGC6 315 aa11.84□□□□□ -0.51
VRK3-209ENST00000594948 ST7LQ8TDW4 575 aa11.84□□□□□ -0.51
VRK3-209ENST00000594948 ARL11Q969Q4 196 aa11.84□□□□□ -0.51
VRK3-209ENST00000594948 MAP3K3Q99759 626 aa11.84□□□□□ -0.51
VRK3-209ENST00000594948 PNO1Q9NRX1 252 aaKnown RBP11.84□□□□□ -0.51
VRK3-209ENST00000594948 MBD2Q9UBB5 411 aa11.84□□□□□ -0.51
VRK3-209ENST00000594948 COA3Q9Y2R0 106 aaPredicted RBP11.84□□□□□ -0.51
VRK3-209ENST00000594948 TDRD6O60522 2096 aaKnown RBP11.84□□□□□ -0.51
VRK3-209ENST00000594948 LILRA5A6NI73 299 aa11.83□□□□□ -0.51
VRK3-209ENST00000594948 CEACAM18A8MTB9 384 aa11.83□□□□□ -0.51
VRK3-209ENST00000594948 PRKNO60260 465 aaPredicted RBP11.83□□□□□ -0.51
VRK3-209ENST00000594948 IGHV4-34P06331 123 aa11.83□□□□□ -0.51
VRK3-209ENST00000594948 LYL1P12980 280 aa11.83□□□□□ -0.51
VRK3-209ENST00000594948 FASLGP48023 281 aa11.83□□□□□ -0.51
VRK3-209ENST00000594948 DCDP81605 110 aaKnown RBP11.83□□□□□ -0.51
VRK3-209ENST00000594948 SCRN3Q0VDG4 424 aa11.83□□□□□ -0.51
VRK3-209ENST00000594948 EBPQ15125 230 aaKnown RBP11.83□□□□□ -0.51
VRK3-209ENST00000594948 ELAVL1Q15717 326 aaKnown RBP11.83□□□□□ -0.51
VRK3-209ENST00000594948 STK11Q15831 433 aa11.83□□□□□ -0.51
VRK3-209ENST00000594948 LRRC37A5PQ49AS3 106 aa11.83□□□□□ -0.51
VRK3-209ENST00000594948 ACTBL2Q562R1 376 aa11.83□□□□□ -0.51
VRK3-209ENST00000594948 SHEQ5VZ18 495 aa11.83□□□□□ -0.51
VRK3-209ENST00000594948 DRAM2Q6UX65 266 aa11.83□□□□□ -0.51
VRK3-209ENST00000594948 IL34Q6ZMJ4 242 aa11.83□□□□□ -0.51
VRK3-209ENST00000594948 MDGA2Q7Z553 956 aa11.83□□□□□ -0.51
VRK3-209ENST00000594948 CD163Q86VB7 1156 aa11.83□□□□□ -0.51
VRK3-209ENST00000594948 PARGQ86W56 976 aa11.83□□□□□ -0.51
VRK3-209ENST00000594948 HOGA1Q86XE5 327 aa11.83□□□□□ -0.51
VRK3-209ENST00000594948 PUSL1Q8N0Z8 303 aaKnown RBP11.83□□□□□ -0.51
VRK3-209ENST00000594948 GTPBP8Q8N3Z3 284 aaPredicted RBP11.83□□□□□ -0.51
VRK3-209ENST00000594948 SLC22A24Q8N4F4 322 aa11.83□□□□□ -0.51
VRK3-209ENST00000594948 PAQR4Q8N4S7 273 aaPredicted RBP11.83□□□□□ -0.51
VRK3-209ENST00000594948 ACBD4Q8NC06 268 aa11.83□□□□□ -0.51
VRK3-209ENST00000594948 OR4S1Q8NGB4 309 aa11.83□□□□□ -0.51
VRK3-209ENST00000594948 RNF141Q8WVD5 230 aa11.83□□□□□ -0.51
VRK3-209ENST00000594948 NARS2Q96I59 477 aaKnown RBP11.83□□□□□ -0.51
VRK3-209ENST00000594948 GAS2L1Q99501 681 aaPredicted RBP11.83□□□□□ -0.51
VRK3-209ENST00000594948 CHMP1AQ9HD42 196 aaPredicted RBP11.83□□□□□ -0.51
VRK3-209ENST00000594948 ASF1BQ9NVP2 202 aa11.83□□□□□ -0.51
VRK3-209ENST00000594948 ZNF629Q9UEG4 869 aaPredicted RBP11.83□□□□□ -0.51
VRK3-209ENST00000594948 PCNX3Q9H6A9 2034 aa11.83□□□□□ -0.52
VRK3-209ENST00000594948 EXPH5Q8NEV8 1989 aa11.83□□□□□ -0.52
VRK3-209ENST00000594948 CHRM2P08172 466 aa11.83□□□□□ -0.52
VRK3-209ENST00000594948 GPR85P60893 370 aa11.83□□□□□ -0.52
VRK3-209ENST00000594948 NKPD1Q17RQ9 610 aa11.83□□□□□ -0.52
VRK3-209ENST00000594948 KIAA0895LQ68EN5 471 aa11.83□□□□□ -0.52
VRK3-209ENST00000594948 AWAT2Q6E213 333 aa11.83□□□□□ -0.52
VRK3-209ENST00000594948 OR10K2Q6IF99 312 aa11.83□□□□□ -0.52
VRK3-209ENST00000594948 ZNF529Q6P280 563 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms