RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 SLC22A20A6NK97 555 aa11.66□□□□□ -0.54
VRK3-205ENST00000593919 PHYHO14832 338 aa11.66□□□□□ -0.54
VRK3-205ENST00000593919 UPK3AO75631 287 aa11.66□□□□□ -0.54
VRK3-205ENST00000593919 CRYABP02511 175 aaKnown RBP11.66□□□□□ -0.54
VRK3-205ENST00000593919 OR8G3PP0DMU2 310 aa11.66□□□□□ -0.54
VRK3-205ENST00000593919 PTBP1P26599 531 aaKnown RBP eCLIP11.66□□□□□ -0.54
VRK3-205ENST00000593919 INPP1P49441 399 aa11.66□□□□□ -0.54
VRK3-205ENST00000593919 RPS11P62280 158 aaKnown RBP eCLIP11.66□□□□□ -0.54
VRK3-205ENST00000593919 PCK2Q16822 640 aa11.66□□□□□ -0.54
VRK3-205ENST00000593919 LINC00303Q3SY05 128 aa11.66□□□□□ -0.54
VRK3-205ENST00000593919 SLC18B1Q6NT16 456 aa11.66□□□□□ -0.54
VRK3-205ENST00000593919 PAMR1Q6UXH9 720 aa11.66□□□□□ -0.54
VRK3-205ENST00000593919 ADGRE4PQ86SQ3 457 aa11.66□□□□□ -0.54
VRK3-205ENST00000593919 LRRC28Q86X40 367 aaPredicted RBP11.66□□□□□ -0.54
VRK3-205ENST00000593919 LINC00346Q8IVM7 164 aa11.66□□□□□ -0.54
VRK3-205ENST00000593919 TEX19Q8NA77 164 aa11.66□□□□□ -0.54
VRK3-205ENST00000593919 ENKURQ8TC29 256 aa11.66□□□□□ -0.54
VRK3-205ENST00000593919 INTS12Q96CB8 462 aaKnown RBP11.66□□□□□ -0.54
VRK3-205ENST00000593919 KCTD12Q96CX2 325 aaKnown RBP11.66□□□□□ -0.54
VRK3-205ENST00000593919 ZNF837Q96EG3 531 aaPredicted RBP11.66□□□□□ -0.54
VRK3-205ENST00000593919 TTYH2Q9BSA4 534 aa11.66□□□□□ -0.54
VRK3-205ENST00000593919 MRM2Q9UI43 246 aaKnown RBP11.66□□□□□ -0.54
VRK3-205ENST00000593919 DHHO43323 396 aa11.65□□□□□ -0.54
VRK3-205ENST00000593919 MRPL33O75394 65 aaKnown RBP11.65□□□□□ -0.54
VRK3-205ENST00000593919 CCNKO75909 580 aa11.65□□□□□ -0.54
VRK3-205ENST00000593919 RPP14O95059 124 aaKnown RBP11.65□□□□□ -0.54
VRK3-205ENST00000593919 WNT11O96014 354 aa11.65□□□□□ -0.54
VRK3-205ENST00000593919 HLA-DQB1P01920 261 aa11.65□□□□□ -0.54
VRK3-205ENST00000593919 TALDO1P37837 337 aa11.65□□□□□ -0.54
VRK3-205ENST00000593919 MAP2K3P46734 347 aa11.65□□□□□ -0.54
VRK3-205ENST00000593919 EGR3Q06889 387 aa11.65□□□□□ -0.54
VRK3-205ENST00000593919 EIF2B1Q14232 305 aaKnown RBP11.65□□□□□ -0.54
VRK3-205ENST00000593919 CCDC58Q4VC31 144 aa11.65□□□□□ -0.54
VRK3-205ENST00000593919 TEX30Q5JUR7 227 aa11.65□□□□□ -0.54
VRK3-205ENST00000593919 ZNF544Q6NX49 715 aa11.65□□□□□ -0.54
VRK3-205ENST00000593919 NCCRP1Q6ZVX7 275 aaPredicted RBP11.65□□□□□ -0.54
VRK3-205ENST00000593919 MCEMP1Q8IX19 187 aa11.65□□□□□ -0.54
VRK3-205ENST00000593919 Q8NA96 180 aa11.65□□□□□ -0.54
VRK3-205ENST00000593919 OR10H5Q8NGA6 315 aa11.65□□□□□ -0.54
VRK3-205ENST00000593919 OR5M9Q8NGP3 310 aa11.65□□□□□ -0.54
VRK3-205ENST00000593919 CHAC2Q8WUX2 184 aa11.65□□□□□ -0.54
VRK3-205ENST00000593919 ABHD6Q9BV23 337 aa11.65□□□□□ -0.54
VRK3-205ENST00000593919 CALHM2Q9HA72 323 aa11.65□□□□□ -0.54
VRK3-205ENST00000593919 CRLF2Q9HC73 371 aa11.65□□□□□ -0.54
VRK3-205ENST00000593919 EMC7Q9NPA0 242 aa11.65□□□□□ -0.54
VRK3-205ENST00000593919 CYSLTR2Q9NS75 346 aa11.65□□□□□ -0.54
VRK3-205ENST00000593919 CLCF1Q9UBD9 225 aa11.65□□□□□ -0.54
VRK3-205ENST00000593919 IKZF2Q9UKS7 526 aa11.65□□□□□ -0.54
VRK3-205ENST00000593919 PAIP2BQ9ULR5 123 aaKnown RBP11.65□□□□□ -0.54
VRK3-205ENST00000593919 ZNF175Q9Y473 711 aa11.65□□□□□ -0.54
VRK3-205ENST00000593919 ACACBO00763 2458 aa11.65□□□□□ -0.55
VRK3-205ENST00000593919 A0A0B4J203 849 aa11.65□□□□□ -0.55
VRK3-205ENST00000593919 TRAV1-2A0A0B4J238 106 aa11.65□□□□□ -0.55
VRK3-205ENST00000593919 ZNF724A8MTY0 619 aa11.65□□□□□ -0.55
VRK3-205ENST00000593919 ARL6IP5O75915 188 aa11.65□□□□□ -0.55
VRK3-205ENST00000593919 ABHD16AO95870 558 aa11.65□□□□□ -0.55
VRK3-205ENST00000593919 UCHL1P09936 223 aa11.65□□□□□ -0.55
VRK3-205ENST00000593919 KIR2DL3P43628 341 aa11.65□□□□□ -0.55
VRK3-205ENST00000593919 NANOS3P60323 173 aaKnown RBP11.65□□□□□ -0.55
VRK3-205ENST00000593919 RIN1Q13671 783 aa11.65□□□□□ -0.55
VRK3-205ENST00000593919 ZNF57Q68EA5 555 aaPredicted RBP11.65□□□□□ -0.55
VRK3-205ENST00000593919 CORO6Q6QEF8 472 aa11.65□□□□□ -0.55
VRK3-205ENST00000593919 FAM180AQ6UWF9 173 aa11.65□□□□□ -0.55
VRK3-205ENST00000593919 LRRN1Q6UXK5 716 aa11.65□□□□□ -0.55
VRK3-205ENST00000593919 LINGO2Q7L985 606 aa11.65□□□□□ -0.55
VRK3-205ENST00000593919 FAM220AQ7Z4H9 259 aa11.65□□□□□ -0.55
VRK3-205ENST00000593919 DCXRQ7Z4W1 244 aa11.65□□□□□ -0.55
VRK3-205ENST00000593919 GLCCI1Q86VQ1 547 aa11.65□□□□□ -0.55
VRK3-205ENST00000593919 GPR137CQ8N3F9 429 aa11.65□□□□□ -0.55
VRK3-205ENST00000593919 YIPF7Q8N8F6 280 aa11.65□□□□□ -0.55
VRK3-205ENST00000593919 ZNF454Q8N9F8 522 aa11.65□□□□□ -0.55
VRK3-205ENST00000593919 ASB17Q8WXJ9 295 aa11.65□□□□□ -0.55
VRK3-205ENST00000593919 ORAI1Q96D31 301 aa11.65□□□□□ -0.55
VRK3-205ENST00000593919 ARPC5LQ9BPX5 153 aa11.65□□□□□ -0.55
VRK3-205ENST00000593919 RBM24Q9BX46 236 aaKnown RBP11.65□□□□□ -0.55
VRK3-205ENST00000593919 HDHD2Q9H0R4 259 aa11.65□□□□□ -0.55
VRK3-205ENST00000593919 RNF122Q9H9V4 155 aa11.65□□□□□ -0.55
VRK3-205ENST00000593919 CYB5R1Q9UHQ9 305 aa11.65□□□□□ -0.55
VRK3-205ENST00000593919 PKD1L2Q7Z442 2459 aa11.64□□□□□ -0.55
VRK3-205ENST00000593919 MEIOCA2RUB1 952 aa11.64□□□□□ -0.55
VRK3-205ENST00000593919 OR14I1A6ND48 311 aa11.64□□□□□ -0.55
VRK3-205ENST00000593919 GATBO75879 557 aaKnown RBP11.64□□□□□ -0.55
VRK3-205ENST00000593919 IGHV3-9P01782 118 aa11.64□□□□□ -0.55
VRK3-205ENST00000593919 KRT8P05787 483 aa11.64□□□□□ -0.55
VRK3-205ENST00000593919 YES1P07947 543 aa11.64□□□□□ -0.55
VRK3-205ENST00000593919 FCGR2AP12318 317 aa11.64□□□□□ -0.55
VRK3-205ENST00000593919 SNRPBP14678 240 aaKnown RBP11.64□□□□□ -0.55
VRK3-205ENST00000593919 MAGEB1P43366 347 aa11.64□□□□□ -0.55
VRK3-205ENST00000593919 HSD17B12Q53GQ0 312 aa11.64□□□□□ -0.55
VRK3-205ENST00000593919 RSBN1Q5VWQ0 802 aaPredicted RBP11.64□□□□□ -0.55
VRK3-205ENST00000593919 LIPNQ5VXI9 398 aa11.64□□□□□ -0.55
VRK3-205ENST00000593919 KCTD20Q7Z5Y7 419 aa11.64□□□□□ -0.55
VRK3-205ENST00000593919 FGD2Q7Z6J4 655 aa11.64□□□□□ -0.55
VRK3-205ENST00000593919 OR5H6Q8NGV6 325 aa11.64□□□□□ -0.55
VRK3-205ENST00000593919 OR52N5Q8NH56 324 aa11.64□□□□□ -0.55
VRK3-205ENST00000593919 ST7LQ8TDW4 575 aa11.64□□□□□ -0.55
VRK3-205ENST00000593919 HSD17B8Q92506 261 aa11.64□□□□□ -0.55
VRK3-205ENST00000593919 RNF166Q96A37 237 aaPredicted RBP11.64□□□□□ -0.55
VRK3-205ENST00000593919 GPR137Q96N19 417 aa11.64□□□□□ -0.55
VRK3-205ENST00000593919 OR8B4Q96RC9 309 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms