RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 OR8G5Q8NG78 346 aa13.68□□□□□ -0.22
LIG1-205ENST00000593425 LZICQ8WZA0 190 aa13.68□□□□□ -0.22
LIG1-205ENST00000593425 COG8Q96MW5 612 aa13.68□□□□□ -0.22
LIG1-205ENST00000593425 TMEM246Q9BRR3 403 aa13.68□□□□□ -0.22
LIG1-205ENST00000593425 SYT4Q9H2B2 425 aa13.68□□□□□ -0.22
LIG1-205ENST00000593425 RERGLQ9H628 205 aa13.68□□□□□ -0.22
LIG1-205ENST00000593425 SAR1AQ9NR31 198 aa13.68□□□□□ -0.22
LIG1-205ENST00000593425 CMTM6Q9NX76 183 aa13.68□□□□□ -0.22
LIG1-205ENST00000593425 IL20RAQ9UHF4 553 aa13.68□□□□□ -0.22
LIG1-205ENST00000593425 POM121CA8CG34 1229 aa13.67□□□□□ -0.22
LIG1-205ENST00000593425 RER1O15258 196 aa13.67□□□□□ -0.22
LIG1-205ENST00000593425 AHCYL1O43865 530 aa13.67□□□□□ -0.22
LIG1-205ENST00000593425 SLC16A7O60669 478 aa13.67□□□□□ -0.22
LIG1-205ENST00000593425 SELEP16581 610 aa13.67□□□□□ -0.22
LIG1-205ENST00000593425 OMGP23515 440 aa13.67□□□□□ -0.22
LIG1-205ENST00000593425 MTNR1AP48039 350 aa13.67□□□□□ -0.22
LIG1-205ENST00000593425 GNB2P62879 340 aa13.67□□□□□ -0.22
LIG1-205ENST00000593425 DEFA6Q01524 100 aa13.67□□□□□ -0.22
LIG1-205ENST00000593425 MAPRE2Q15555 327 aa13.67□□□□□ -0.22
LIG1-205ENST00000593425 PDLIM3Q53GG5 364 aaPredicted RBP13.67□□□□□ -0.22
LIG1-205ENST00000593425 BTNL3Q6UXE8 466 aa13.67□□□□□ -0.22
LIG1-205ENST00000593425 LRRN1Q6UXK5 716 aa13.67□□□□□ -0.22
LIG1-205ENST00000593425 FBXW12Q6X9E4 464 aa13.67□□□□□ -0.22
LIG1-205ENST00000593425 PCYOX1LQ8NBM8 494 aa13.67□□□□□ -0.22
LIG1-205ENST00000593425 RAB40AQ8WXH6 277 aa13.67□□□□□ -0.22
LIG1-205ENST00000593425 GID8Q9NWU2 228 aa13.67□□□□□ -0.22
LIG1-205ENST00000593425 PKD1L1Q8TDX9 2849 aa13.66□□□□□ -0.22
LIG1-205ENST00000593425 F5H5P2 479 aa13.66□□□□□ -0.22
LIG1-205ENST00000593425 J3QW42 95 aa13.66□□□□□ -0.22
LIG1-205ENST00000593425 IFNL4K9M1U5 179 aa13.66□□□□□ -0.22
LIG1-205ENST00000593425 KHDRBS3O75525 346 aaKnown RBP13.66□□□□□ -0.22
LIG1-205ENST00000593425 ZNF682O95780 498 aa13.66□□□□□ -0.22
LIG1-205ENST00000593425 PMELP40967 661 aa13.66□□□□□ -0.22
LIG1-205ENST00000593425 PRSS12P56730 875 aa13.66□□□□□ -0.22
LIG1-205ENST00000593425 LSM6P62312 80 aaKnown RBP13.66□□□□□ -0.22
LIG1-205ENST00000593425 ZNF404Q494X3 552 aa13.66□□□□□ -0.22
LIG1-205ENST00000593425 IFI44LQ53G44 452 aa13.66□□□□□ -0.22
LIG1-205ENST00000593425 CGB2Q6NT52 195 aa13.66□□□□□ -0.22
LIG1-205ENST00000593425 SLC27A4Q6P1M0 643 aa13.66□□□□□ -0.22
LIG1-205ENST00000593425 PTCHD4Q6ZW05 846 aa13.66□□□□□ -0.22
LIG1-205ENST00000593425 SPATC1Q76KD6 591 aa13.66□□□□□ -0.22
LIG1-205ENST00000593425 TSEN54Q7Z6J9 526 aaKnown RBP13.66□□□□□ -0.22
LIG1-205ENST00000593425 MOGAT3Q86VF5 341 aa13.66□□□□□ -0.22
LIG1-205ENST00000593425 GLB1L2Q8IW92 636 aa13.66□□□□□ -0.22
LIG1-205ENST00000593425 BHLHE23Q8NDY6 225 aa13.66□□□□□ -0.22
LIG1-205ENST00000593425 OR13G1Q8NGZ3 307 aa13.66□□□□□ -0.22
LIG1-205ENST00000593425 TMIGD2Q96BF3 282 aa13.66□□□□□ -0.22
LIG1-205ENST00000593425 NEIL1Q96FI4 390 aaPredicted RBP13.66□□□□□ -0.22
LIG1-205ENST00000593425 FAM46AQ96IP4 442 aaKnown RBP13.66□□□□□ -0.22
LIG1-205ENST00000593425 HSH2DQ96JZ2 352 aa13.66□□□□□ -0.22
LIG1-205ENST00000593425 SLITRK2Q9H156 845 aa13.66□□□□□ -0.22
LIG1-205ENST00000593425 WDR76Q9H967 626 aa13.66□□□□□ -0.22
LIG1-205ENST00000593425 NMNAT1Q9HAN9 279 aaPredicted RBP13.66□□□□□ -0.22
LIG1-205ENST00000593425 MIOXQ9UGB7 285 aa13.66□□□□□ -0.22
LIG1-205ENST00000593425 SOCS2O14508 198 aa13.65□□□□□ -0.22
LIG1-205ENST00000593425 HOXA3O43365 443 aaPredicted RBP13.65□□□□□ -0.22
LIG1-205ENST00000593425 SDHAP31040 664 aa13.65□□□□□ -0.22
LIG1-205ENST00000593425 SRP9P49458 86 aaKnown RBP13.65□□□□□ -0.22
LIG1-205ENST00000593425 RGS6P49758 472 aa13.65□□□□□ -0.22
LIG1-205ENST00000593425 FXYD6P3P58550 94 aa13.65□□□□□ -0.22
LIG1-205ENST00000593425 MEP1BQ16820 701 aa13.65□□□□□ -0.22
LIG1-205ENST00000593425 ZNF181Q2M3W8 571 aa13.65□□□□□ -0.22
LIG1-205ENST00000593425 DEFB112Q30KQ8 113 aa13.65□□□□□ -0.22
LIG1-205ENST00000593425 C16orf87Q6PH81 154 aa13.65□□□□□ -0.22
LIG1-205ENST00000593425 BRD3OSQ6XYD6 125 aa13.65□□□□□ -0.22
LIG1-205ENST00000593425 CBLL1Q75N03 491 aa13.65□□□□□ -0.22
LIG1-205ENST00000593425 SLC7A13Q8TCU3 470 aa13.65□□□□□ -0.22
LIG1-205ENST00000593425 APOBEC3DQ96AK3 386 aaPredicted RBP13.65□□□□□ -0.22
LIG1-205ENST00000593425 RCN3Q96D15 328 aa13.65□□□□□ -0.22
LIG1-205ENST00000593425 ZNF582Q96NG8 517 aaPredicted RBP13.65□□□□□ -0.22
LIG1-205ENST00000593425 GPX7Q96SL4 187 aaPredicted RBP13.65□□□□□ -0.22
LIG1-205ENST00000593425 SLC30A2Q9BRI3 323 aa13.65□□□□□ -0.22
LIG1-205ENST00000593425 NUAK2Q9H093 628 aa13.65□□□□□ -0.22
LIG1-205ENST00000593425 NRIP3Q9NQ35 241 aa13.65□□□□□ -0.22
LIG1-205ENST00000593425 VSX1Q9NZR4 365 aaPredicted RBP13.65□□□□□ -0.22
LIG1-205ENST00000593425 ATPIF1Q9UII2 106 aa13.65□□□□□ -0.22
LIG1-205ENST00000593425 SIGLEC7Q9Y286 467 aa13.65□□□□□ -0.22
LIG1-205ENST00000593425 DOCK11Q5JSL3 2073 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 KIR2DS1A0A191URI9 304 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 IQCF6A8MYZ5 107 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 CXCR6O00574 342 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 PTP4A3O75365 173 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 NDUFB2O95178 105 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 HLA-DPB1P04440 258 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 CPT2P23786 658 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 PITPNBP48739 271 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 HIST1H3AP68431 136 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 LIPEQ05469 1076 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 SRSF4Q08170 494 aaKnown RBP13.64□□□□□ -0.23
LIG1-205ENST00000593425 KCNMB1Q16558 191 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 HIST2H3PS2Q5TEC6 136 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 LYPD2Q6UXB3 125 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 HIST2H3AQ71DI3 136 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.64□□□□□ -0.23
LIG1-205ENST00000593425 SLC15A3Q8IY34 581 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 FITM2Q8N6M3 262 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 C19orf18Q8NEA5 215 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 OR8B3Q8NGG8 313 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 OR5L1Q8NGL2 311 aa13.64□□□□□ -0.23
LIG1-205ENST00000593425 OR10S1Q8NGN2 331 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms