RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 ZNF823P16415 610 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 ZNF3P17036 446 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 SPI1P17947 270 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 USF1P22415 310 aaPredicted RBP7.85□□□□□ -1.15
DNMT1-223ENST00000591239 TUBG1P23258 451 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 GIFP27352 417 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 GRK5P34947 590 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 SLC25A1P53007 311 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 CCL8P80075 99 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 CCNIQ14094 377 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 GGTLC2Q14390 218 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 GINS1Q14691 196 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 RSPO1Q2MKA7 263 aaPredicted RBP7.85□□□□□ -1.15
DNMT1-223ENST00000591239 TMEM249Q2WGJ8 235 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 PCGF3Q3KNV8 242 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 TMEM255AQ5JRV8 349 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 ACSM5Q6NUN0 579 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 SLC27A4Q6P1M0 643 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 LYPD4Q6UWN0 246 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 CFAP77Q6ZQR2 320 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 CCDC121Q6ZUS5 278 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 ASRGL1Q7L266 308 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 OR2AJ1Q8NGZ0 328 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 GTF3AQ92664 365 aaKnown RBP7.85□□□□□ -1.15
DNMT1-223ENST00000591239 NRBF2Q96F24 287 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 DCLRE1CQ96SD1 692 aaKnown RBP7.85□□□□□ -1.15
DNMT1-223ENST00000591239 COQ7Q99807 217 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 BPESC1Q9GZL8 116 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 POFUT1Q9H488 388 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 TUBG2Q9NRH3 451 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 KCNG2Q9UJ96 466 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 STARD10Q9Y365 291 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 AP4S1Q9Y587 144 aa7.85□□□□□ -1.15
DNMT1-223ENST00000591239 PLSCR5A0PG75 271 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 FAM183AA6NL82 134 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 J3QW42 95 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 CIB2O75838 187 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 NCR1O76036 304 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 COL8A2P25067 703 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 FASP25445 335 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 FMO3P31513 532 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 RPS27P42677 84 aaKnown RBP7.84□□□□□ -1.15
DNMT1-223ENST00000591239 MAGEB1P43366 347 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 RGS6P49758 472 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 DAPP51397 102 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 ZNF81P51508 661 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 MMP15P51511 669 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 CDK5Q00535 292 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 ECH1Q13011 328 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 PSG7Q13046 419 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 RIN1Q13671 783 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 ATP6AP1Q15904 470 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 ZNF511Q8NB15 262 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 OR6K6Q8NGW6 343 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 OR5K1Q8NHB7 308 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 DNAJC9Q8WXX5 260 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 RDH5Q92781 318 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 PTP4A1Q93096 173 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 OTULINQ96BN8 352 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 DUS3LQ96G46 650 aaKnown RBP7.84□□□□□ -1.15
DNMT1-223ENST00000591239 MAP6Q96JE9 813 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 COG8Q96MW5 612 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 ATF6BQ99941 703 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 HCAR1Q9BXC0 346 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 MED20Q9H944 212 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 WDR76Q9H967 626 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 PNRC2Q9NPJ4 139 aaKnown RBP7.84□□□□□ -1.15
DNMT1-223ENST00000591239 NKIRAS2Q9NYR9 191 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 KIF17Q9P2E2 1029 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 COMMD3-BMI1R4GMX3 469 aa7.84□□□□□ -1.15
DNMT1-223ENST00000591239 FN1P02751 2386 aaKnown RBP7.84□□□□□ -1.15
DNMT1-223ENST00000591239 IGHV4-61A0A0C4DH41 118 aa7.83□□□□□ -1.16
DNMT1-223ENST00000591239 INAFM1C9JVW0 142 aa7.83□□□□□ -1.16
DNMT1-223ENST00000591239 F5H5K5 113 aa7.83□□□□□ -1.16
DNMT1-223ENST00000591239 G3V2T6 193 aa7.83□□□□□ -1.16
DNMT1-223ENST00000591239 ZNF593O00488 134 aaPredicted RBP7.83□□□□□ -1.16
DNMT1-223ENST00000591239 SURF4O15260 269 aa7.83□□□□□ -1.16
DNMT1-223ENST00000591239 TPD52L2O43399 206 aaKnown RBP7.83□□□□□ -1.16
DNMT1-223ENST00000591239 SPRY3O43610 288 aa7.83□□□□□ -1.16
DNMT1-223ENST00000591239 CD5LO43866 347 aa7.83□□□□□ -1.16
DNMT1-223ENST00000591239 TIMM8AO60220 97 aaPredicted RBP7.83□□□□□ -1.16
DNMT1-223ENST00000591239 HMGN1P05114 100 aa7.83□□□□□ -1.16
DNMT1-223ENST00000591239 ACSM4P0C7M7 580 aa7.83□□□□□ -1.16
DNMT1-223ENST00000591239 PSKH1P11801 424 aa7.83□□□□□ -1.16
DNMT1-223ENST00000591239 FCGR1AP12314 374 aa7.83□□□□□ -1.16
DNMT1-223ENST00000591239 HOXB4P17483 251 aaPredicted RBP7.83□□□□□ -1.16
DNMT1-223ENST00000591239 PAICSP22234 425 aaKnown RBP7.83□□□□□ -1.16
DNMT1-223ENST00000591239 ACHEP22303 614 aa7.83□□□□□ -1.16
DNMT1-223ENST00000591239 LIPAP38571 399 aa7.83□□□□□ -1.16
DNMT1-223ENST00000591239 ENTPD1P49961 510 aa7.83□□□□□ -1.16
DNMT1-223ENST00000591239 BLVRAP53004 296 aa7.83□□□□□ -1.16
DNMT1-223ENST00000591239 MRPS11P82912 194 aaKnown RBP7.83□□□□□ -1.16
DNMT1-223ENST00000591239 TSTQ16762 297 aaKnown RBP7.83□□□□□ -1.16
DNMT1-223ENST00000591239 PCK2Q16822 640 aa7.83□□□□□ -1.16
DNMT1-223ENST00000591239 KRTAP27-1Q3LI81 207 aa7.83□□□□□ -1.16
DNMT1-223ENST00000591239 TEX30Q5JUR7 227 aa7.83□□□□□ -1.16
DNMT1-223ENST00000591239 FAM209AQ5JX71 171 aa7.83□□□□□ -1.16
DNMT1-223ENST00000591239 LINC01590Q5TEZ4 76 aa7.83□□□□□ -1.16
DNMT1-223ENST00000591239 TMEM236Q5W0B7 351 aa7.83□□□□□ -1.16
DNMT1-223ENST00000591239 FAHD1Q6P587 224 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms