RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 C12orf49Q9H741 205 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 NOX4Q9NPH5 578 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 AKIP1Q9NQ31 210 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 CRNNQ9UBG3 495 aaPredicted RBP10.01□□□□□ -0.81
SMAD4-205ENST00000588745 PLEKHB1Q9UF11 243 aaPredicted RBP10.01□□□□□ -0.81
SMAD4-205ENST00000588745 NUFIP1Q9UHK0 495 aaKnown RBP10.01□□□□□ -0.81
SMAD4-205ENST00000588745 PRSS50Q9UI38 385 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 TUBD1Q9UJT1 453 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 PEX16Q9Y5Y5 336 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 CACNA1AO00555 2505 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 TRBV5-7A0A0A0MS05 114 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 LOC107986453A0A1B0GWG9 222 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 A0A1W2PPK0 400 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 SGCEO43556 437 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 DOK2O60496 412 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 NCR1O76036 304 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 FAM87AP0C7U9 286 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 ZNF32P17041 273 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 CFL1P23528 166 aaKnown RBP10.01□□□□□ -0.81
SMAD4-205ENST00000588745 S100A5P33763 92 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 SOX2P48431 317 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 CX3CR1P49238 355 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 PRKXP51817 358 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 TDGF1P3P51864 188 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 CAV3P56539 151 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 PCBD1P61457 104 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 SF3B4Q15427 424 aaKnown RBP eCLIP10.01□□□□□ -0.811e-6■■■■■ 39.8
SMAD4-205ENST00000588745 NSUN5P2Q63ZY6 315 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 OR2A2Q6IF42 318 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 ZNF585AQ6P3V2 769 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 FAM214BQ7L5A3 538 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 ELMOD2Q8IZ81 293 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 RDH10Q8IZV5 341 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 GCNT2Q8N0V5 402 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 UBE2J2Q8N2K1 259 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 ZNF283Q8N7M2 679 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 C9orf106Q8NAJ2 232 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 OR51A4Q8NGJ6 313 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 PPP1R14AQ96A00 147 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 KCNS3Q9BQ31 491 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 PBOV1Q9GZY1 135 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 PLEK2Q9NYT0 353 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 SLC5A6Q9Y289 635 aa10.01□□□□□ -0.81
SMAD4-205ENST00000588745 NCOA6Q14686 2063 aaPredicted RBP10□□□□□ -0.81
SMAD4-205ENST00000588745 MED12LQ86YW9 2145 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 NCOR2Q9Y618 2525 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 A0A0G2JK05 382 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 VGLL3A8MV65 326 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 WDR1O75083 606 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 TTRP02766 147 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 RAF1P04049 648 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 ISG15P05161 165 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 TPOP07202 933 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 GABRA1P14867 456 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 RAB3BP20337 219 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 CTSSP25774 331 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 OTX1P32242 354 aaPredicted RBP10□□□□□ -0.81
SMAD4-205ENST00000588745 PTGER4P35408 488 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 MAGEB1P43366 347 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 BMXP51813 675 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 FOXG1P55316 489 aaPredicted RBP10□□□□□ -0.81
SMAD4-205ENST00000588745 ZNF121P58317 390 aaPredicted RBP10□□□□□ -0.81
SMAD4-205ENST00000588745 FAPQ12884 760 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 C9orf135Q5VTT2 229 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 TMEM244Q5VVB8 128 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 FBXW9Q5XUX1 488 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 ZNF774Q6NX45 483 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 TFAP2EQ6VUC0 442 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 NR2C2APQ86WQ0 139 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 CROCCP3Q8IVE0 287 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 SKA3Q8IX90 412 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 MFSD4AQ8N468 514 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 OR6K3Q8NGY3 331 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 S100ZQ8WXG8 99 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 TMEM106AQ96A25 262 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 OR2H1Q9GZK4 316 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 SLC25A18Q9H1K4 315 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 BRD7Q9NPI1 651 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 HHLA2Q9UM44 414 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 DHDHQ9UQ10 334 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 TIMM10BQ9Y5J6 103 aa10□□□□□ -0.81
SMAD4-205ENST00000588745 MGAQ8IWI9 3026 aa9.99□□□□□ -0.81
SMAD4-205ENST00000588745 DMXL2Q8TDJ6 3036 aa9.99□□□□□ -0.81
SMAD4-205ENST00000588745 MBD3L4A6NDZ8 208 aaPredicted RBP9.99□□□□□ -0.81
SMAD4-205ENST00000588745 MBD3L3A6NE82 208 aaPredicted RBP9.99□□□□□ -0.81
SMAD4-205ENST00000588745 OR6C6A6NF89 314 aa9.99□□□□□ -0.81
SMAD4-205ENST00000588745 MBD3L5A6NJ08 208 aaPredicted RBP9.99□□□□□ -0.81
SMAD4-205ENST00000588745 FIGNL2A6NMB9 653 aa9.99□□□□□ -0.81
SMAD4-205ENST00000588745 CLDN25C9JDP6 229 aa9.99□□□□□ -0.81
SMAD4-205ENST00000588745 H3BSH0 61 aa9.99□□□□□ -0.81
SMAD4-205ENST00000588745 M0R135 149 aa9.99□□□□□ -0.81
SMAD4-205ENST00000588745 P2RY10O00398 339 aa9.99□□□□□ -0.81
SMAD4-205ENST00000588745 PDCD5O14737 125 aa9.99□□□□□ -0.81
SMAD4-205ENST00000588745 SYNGR3O43761 229 aa9.99□□□□□ -0.81
SMAD4-205ENST00000588745 APOC1P02654 83 aa9.99□□□□□ -0.81
SMAD4-205ENST00000588745 ANXA2P07355 339 aaKnown RBP9.99□□□□□ -0.81
SMAD4-205ENST00000588745 MMP7P09237 267 aaPredicted RBP9.99□□□□□ -0.81
SMAD4-205ENST00000588745 ACSM4P0C7M7 580 aa9.99□□□□□ -0.81
SMAD4-205ENST00000588745 SLC2A1P11166 492 aa9.99□□□□□ -0.81
SMAD4-205ENST00000588745 BMP4P12644 408 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms