RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 ZNF181Q2M3W8 571 aa15.37■□□□□ 0.05
CCDC43-204ENST00000588687 MIDNQ504T8 468 aa15.37■□□□□ 0.05
CCDC43-204ENST00000588687 C16orf87Q6PH81 154 aa15.37■□□□□ 0.05
CCDC43-204ENST00000588687 SPATC1Q76KD6 591 aa15.37■□□□□ 0.05
CCDC43-204ENST00000588687 PCYOX1LQ8NBM8 494 aa15.37■□□□□ 0.05
CCDC43-204ENST00000588687 OR8G5Q8NG78 346 aa15.37■□□□□ 0.05
CCDC43-204ENST00000588687 OR1F12Q8NHA8 337 aa15.37■□□□□ 0.05
CCDC43-204ENST00000588687 RAB40AQ8WXH6 277 aa15.37■□□□□ 0.05
CCDC43-204ENST00000588687 ACOT11Q8WXI4 607 aaPredicted RBP15.37■□□□□ 0.05
CCDC43-204ENST00000588687 TPD52L3Q96J77 140 aa15.37■□□□□ 0.05
CCDC43-204ENST00000588687 SLC30A2Q9BRI3 323 aa15.37■□□□□ 0.05
CCDC43-204ENST00000588687 GMPR2Q9P2T1 348 aaKnown RBP15.37■□□□□ 0.05
CCDC43-204ENST00000588687 KIR2DS1A0A191URI9 304 aa15.36■□□□□ 0.05
CCDC43-204ENST00000588687 SELEP16581 610 aa15.36■□□□□ 0.05
CCDC43-204ENST00000588687 LSM6P62312 80 aaKnown RBP15.36■□□□□ 0.05
CCDC43-204ENST00000588687 GNB2P62879 340 aa15.36■□□□□ 0.05
CCDC43-204ENST00000588687 TRAM2Q15035 370 aa15.36■□□□□ 0.05
CCDC43-204ENST00000588687 DEFB112Q30KQ8 113 aa15.36■□□□□ 0.05
CCDC43-204ENST00000588687 FAM201AQ5SY85 155 aa15.36■□□□□ 0.05
CCDC43-204ENST00000588687 OR2T2Q6IF00 324 aa15.36■□□□□ 0.05
CCDC43-204ENST00000588687 C1orf94Q6P1W5 598 aa15.36■□□□□ 0.05
CCDC43-204ENST00000588687 TBPL2Q6SJ96 375 aa15.36■□□□□ 0.05
CCDC43-204ENST00000588687 BTNL3Q6UXE8 466 aa15.36■□□□□ 0.05
CCDC43-204ENST00000588687 TMPRSS11FQ6ZWK6 438 aa15.36■□□□□ 0.05
CCDC43-204ENST00000588687 MBOAT2Q6ZWT7 520 aa15.36■□□□□ 0.05
CCDC43-204ENST00000588687 TSEN54Q7Z6J9 526 aaKnown RBP15.36■□□□□ 0.05
CCDC43-204ENST00000588687 FITM2Q8N6M3 262 aa15.36■□□□□ 0.05
CCDC43-204ENST00000588687 OR2T12Q8NG77 320 aa15.36■□□□□ 0.05
CCDC43-204ENST00000588687 RASD2Q96D21 266 aa15.36■□□□□ 0.05
CCDC43-204ENST00000588687 NEIL1Q96FI4 390 aaPredicted RBP15.36■□□□□ 0.05
CCDC43-204ENST00000588687 ZNF570Q96NI8 536 aa15.36■□□□□ 0.05
CCDC43-204ENST00000588687 CDADC1Q9BWV3 514 aa15.36■□□□□ 0.05
CCDC43-204ENST00000588687 SYT4Q9H2B2 425 aa15.36■□□□□ 0.05
CCDC43-204ENST00000588687 PTTG3PQ9NZH4 202 aa15.36■□□□□ 0.05
CCDC43-204ENST00000588687 VSX1Q9NZR4 365 aaPredicted RBP15.36■□□□□ 0.05
CCDC43-204ENST00000588687 GRHPRQ9UBQ7 328 aa15.36■□□□□ 0.05
CCDC43-204ENST00000588687 MIOXQ9UGB7 285 aa15.36■□□□□ 0.05
CCDC43-204ENST00000588687 IGHV3-64DA0A0J9YX35 117 aa15.35■□□□□ 0.05
CCDC43-204ENST00000588687 BBIP1A8MTZ0 92 aa15.35■□□□□ 0.05
CCDC43-204ENST00000588687 IQCF6A8MYZ5 107 aa15.35■□□□□ 0.05
CCDC43-204ENST00000588687 SRRM5B3KS81 715 aa15.35■□□□□ 0.05
CCDC43-204ENST00000588687 RER1O15258 196 aa15.35■□□□□ 0.05
CCDC43-204ENST00000588687 RGS6P49758 472 aa15.35■□□□□ 0.05
CCDC43-204ENST00000588687 FXYD6P3P58550 94 aa15.35■□□□□ 0.05
CCDC43-204ENST00000588687 HIST1H3AP68431 136 aa15.35■□□□□ 0.05
CCDC43-204ENST00000588687 KLF10Q13118 480 aa15.35■□□□□ 0.05
CCDC43-204ENST00000588687 KRR1Q13601 381 aaKnown RBP15.35■□□□□ 0.05
CCDC43-204ENST00000588687 HIST2H3PS2Q5TEC6 136 aa15.35■□□□□ 0.05
CCDC43-204ENST00000588687 SLC27A4Q6P1M0 643 aa15.35■□□□□ 0.05
CCDC43-204ENST00000588687 BRD3OSQ6XYD6 125 aa15.35■□□□□ 0.05
CCDC43-204ENST00000588687 ZNF841Q6ZN19 808 aa15.35■□□□□ 0.05
CCDC43-204ENST00000588687 HIST2H3AQ71DI3 136 aa15.35■□□□□ 0.05
CCDC43-204ENST00000588687 MOGAT3Q86VF5 341 aa15.35■□□□□ 0.05
CCDC43-204ENST00000588687 RNF113BQ8IZP6 322 aaKnown RBP15.35■□□□□ 0.05
CCDC43-204ENST00000588687 ATG16L2Q8NAA4 619 aa15.35■□□□□ 0.05
CCDC43-204ENST00000588687 OR10S1Q8NGN2 331 aa15.35■□□□□ 0.05
CCDC43-204ENST00000588687 GPX7Q96SL4 187 aaPredicted RBP15.35■□□□□ 0.05
CCDC43-204ENST00000588687 TMEM120AQ9BXJ8 343 aa15.35■□□□□ 0.05
CCDC43-204ENST00000588687 PDP1Q9P0J1 537 aaPredicted RBP15.35■□□□□ 0.05
CCDC43-204ENST00000588687 COA3Q9Y2R0 106 aaPredicted RBP15.35■□□□□ 0.05
CCDC43-204ENST00000588687 FAM181BA6NEQ2 426 aa15.34■□□□□ 0.05
CCDC43-204ENST00000588687 C22orf46C9J442 243 aa15.34■□□□□ 0.05
CCDC43-204ENST00000588687 F5H5P2 479 aa15.34■□□□□ 0.05
CCDC43-204ENST00000588687 IFNW1P05000 195 aa15.34■□□□□ 0.05
CCDC43-204ENST00000588687 RPL4P36578 427 aaKnown RBP15.34■□□□□ 0.05
CCDC43-204ENST00000588687 GATA4P43694 442 aa15.34■□□□□ 0.05
CCDC43-204ENST00000588687 PITPNBP48739 271 aa15.34■□□□□ 0.05
CCDC43-204ENST00000588687 KCNMB1Q16558 191 aa15.34■□□□□ 0.05
CCDC43-204ENST00000588687 RSPO1Q2MKA7 263 aaPredicted RBP15.34■□□□□ 0.05
CCDC43-204ENST00000588687 KRTAP27-1Q3LI81 207 aa15.34■□□□□ 0.05
CCDC43-204ENST00000588687 ZBED5Q49AG3 693 aa15.34■□□□□ 0.05
CCDC43-204ENST00000588687 COLCA1Q6ZS62 124 aa15.34■□□□□ 0.05
CCDC43-204ENST00000588687 PTCHD4Q6ZW05 846 aa15.34■□□□□ 0.05
CCDC43-204ENST00000588687 GLB1L2Q8IW92 636 aa15.34■□□□□ 0.05
CCDC43-204ENST00000588687 OR13G1Q8NGZ3 307 aa15.34■□□□□ 0.05
CCDC43-204ENST00000588687 CITED1Q99966 193 aa15.34■□□□□ 0.05
CCDC43-204ENST00000588687 FNDC11Q9BVV2 318 aa15.34■□□□□ 0.05
CCDC43-204ENST00000588687 NMNAT1Q9HAN9 279 aaPredicted RBP15.34■□□□□ 0.05
CCDC43-204ENST00000588687 NRIP3Q9NQ35 241 aa15.34■□□□□ 0.05
CCDC43-204ENST00000588687 SIGLEC7Q9Y286 467 aa15.34■□□□□ 0.05
CCDC43-204ENST00000588687 LHFPL6Q9Y693 200 aa15.34■□□□□ 0.05
CCDC43-204ENST00000588687 ELOVL7A1L3X0 281 aa15.33■□□□□ 0.04
CCDC43-204ENST00000588687 XKRYO14609 159 aa15.33■□□□□ 0.04
CCDC43-204ENST00000588687 PHYHO14832 338 aa15.33■□□□□ 0.04
CCDC43-204ENST00000588687 SLC16A7O60669 478 aa15.33■□□□□ 0.04
CCDC43-204ENST00000588687 SDHAP31040 664 aa15.33■□□□□ 0.04
CCDC43-204ENST00000588687 SRP9P49458 86 aaKnown RBP15.33■□□□□ 0.04
CCDC43-204ENST00000588687 RAD23AP54725 363 aa15.33■□□□□ 0.04
CCDC43-204ENST00000588687 HOXA4Q00056 320 aaPredicted RBP15.33■□□□□ 0.04
CCDC43-204ENST00000588687 WDR25Q64LD2 544 aaPredicted RBP15.33■□□□□ 0.04
CCDC43-204ENST00000588687 LYPD2Q6UXB3 125 aa15.33■□□□□ 0.04
CCDC43-204ENST00000588687 ZNF730Q6ZMV8 503 aa15.33■□□□□ 0.04
CCDC43-204ENST00000588687 RHOUQ7L0Q8 258 aa15.33■□□□□ 0.04
CCDC43-204ENST00000588687 BHLHE23Q8NDY6 225 aa15.33■□□□□ 0.04
CCDC43-204ENST00000588687 SLC7A13Q8TCU3 470 aa15.33■□□□□ 0.04
CCDC43-204ENST00000588687 APOBEC3DQ96AK3 386 aaPredicted RBP15.33■□□□□ 0.04
CCDC43-204ENST00000588687 NUDT16L1Q9BRJ7 211 aaKnown RBP15.33■□□□□ 0.04
CCDC43-204ENST00000588687 SAR1AQ9NR31 198 aa15.33■□□□□ 0.04
CCDC43-204ENST00000588687 CMTM6Q9NX76 183 aa15.33■□□□□ 0.04
CCDC43-204ENST00000588687 C1RLQ9NZP8 487 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms