RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-211ENST00000588200 TRAPPC2LH3BP13 241 aa11.22□□□□□ -0.61
PKN1-211ENST00000588200 TMEM178BH3BS89 294 aa11.22□□□□□ -0.61
PKN1-211ENST00000588200 SLC16A7O60669 478 aa11.22□□□□□ -0.61
PKN1-211ENST00000588200 SBK2P0C263 348 aa11.22□□□□□ -0.61
PKN1-211ENST00000588200 MDH2P40926 338 aaKnown RBP11.22□□□□□ -0.61
PKN1-211ENST00000588200 RPS6KA3P51812 740 aa11.22□□□□□ -0.61
PKN1-211ENST00000588200 ACTG1P63261 375 aa11.22□□□□□ -0.61
PKN1-211ENST00000588200 PAX2Q02962 417 aa11.22□□□□□ -0.61
PKN1-211ENST00000588200 PAX8Q06710 450 aa11.22□□□□□ -0.61
PKN1-211ENST00000588200 COX10Q12887 443 aa11.22□□□□□ -0.61
PKN1-211ENST00000588200 ZNF154Q13106 437 aa11.22□□□□□ -0.61
PKN1-211ENST00000588200 KRTAP27-1Q3LI81 207 aa11.22□□□□□ -0.61
PKN1-211ENST00000588200 PTCHD4Q6ZW05 846 aa11.22□□□□□ -0.61
PKN1-211ENST00000588200 OR8G5Q8NG78 346 aa11.22□□□□□ -0.61
PKN1-211ENST00000588200 OR2Z1Q8NG97 314 aa11.22□□□□□ -0.61
PKN1-211ENST00000588200 OR13G1Q8NGZ3 307 aa11.22□□□□□ -0.61
PKN1-211ENST00000588200 APOBEC3DQ96AK3 386 aaPredicted RBP11.22□□□□□ -0.61
PKN1-211ENST00000588200 DACT3Q96B18 629 aaPredicted RBP11.22□□□□□ -0.61
PKN1-211ENST00000588200 CMTM5Q96DZ9 223 aa11.22□□□□□ -0.61
PKN1-211ENST00000588200 FAM46AQ96IP4 442 aaKnown RBP11.22□□□□□ -0.61
PKN1-211ENST00000588200 OR2V2Q96R30 315 aa11.22□□□□□ -0.61
PKN1-211ENST00000588200 GPA33Q99795 319 aa11.22□□□□□ -0.61
PKN1-211ENST00000588200 SLC6A7Q99884 636 aa11.22□□□□□ -0.61
PKN1-211ENST00000588200 HDHD2Q9H0R4 259 aa11.22□□□□□ -0.61
PKN1-211ENST00000588200 KRCC1Q9NPI7 259 aaPredicted RBP11.22□□□□□ -0.61
PKN1-211ENST00000588200 DCAF16Q9NXF7 216 aa11.22□□□□□ -0.61
PKN1-211ENST00000588200 IL20RAQ9UHF4 553 aa11.22□□□□□ -0.61
PKN1-211ENST00000588200 NUP50Q9UKX7 468 aa11.22□□□□□ -0.61
PKN1-211ENST00000588200 SAMD4AQ9UPU9 718 aaKnown RBP11.22□□□□□ -0.61
PKN1-211ENST00000588200 LRCH1Q9Y2L9 728 aa11.22□□□□□ -0.61
PKN1-211ENST00000588200 COA3Q9Y2R0 106 aaPredicted RBP11.22□□□□□ -0.61
PKN1-211ENST00000588200 FAM32AQ9Y421 112 aaKnown RBP11.22□□□□□ -0.61
PKN1-211ENST00000588200 IGLV1-36A0A0B4J1U3 117 aa11.21□□□□□ -0.61
PKN1-211ENST00000588200 IQCF6A8MYZ5 107 aa11.21□□□□□ -0.61
PKN1-211ENST00000588200 WNT2P09544 360 aa11.21□□□□□ -0.61
PKN1-211ENST00000588200 PRDX6P30041 224 aa11.21□□□□□ -0.61
PKN1-211ENST00000588200 CDKN2AP42771 156 aaKnown RBP11.21□□□□□ -0.61
PKN1-211ENST00000588200 GATA4P43694 442 aa11.21□□□□□ -0.61
PKN1-211ENST00000588200 UBA52P62987 128 aaKnown RBP11.21□□□□□ -0.61
PKN1-211ENST00000588200 FOXL1Q12952 345 aa11.21□□□□□ -0.61
PKN1-211ENST00000588200 ZMYND11Q15326 602 aa11.21□□□□□ -0.61
PKN1-211ENST00000588200 RSPO1Q2MKA7 263 aaPredicted RBP11.21□□□□□ -0.61
PKN1-211ENST00000588200 GLYATQ6IB77 296 aa11.21□□□□□ -0.61
PKN1-211ENST00000588200 DNM1P34Q6PK57 102 aa11.21□□□□□ -0.61
PKN1-211ENST00000588200 SMARCD3Q6STE5 483 aa11.21□□□□□ -0.61
PKN1-211ENST00000588200 C9orf139Q6ZV77 190 aa11.21□□□□□ -0.61
PKN1-211ENST00000588200 ZBTB46Q86UZ6 589 aa11.21□□□□□ -0.61
PKN1-211ENST00000588200 CELF2-AS1Q8N7Q2 184 aa11.21□□□□□ -0.61
PKN1-211ENST00000588200 C3orf56Q8N813 242 aa11.21□□□□□ -0.61
PKN1-211ENST00000588200 ITLN1Q8WWA0 313 aa11.21□□□□□ -0.61
PKN1-211ENST00000588200 FAM162AQ96A26 154 aa11.21□□□□□ -0.61
PKN1-211ENST00000588200 RSRC1Q96IZ7 334 aaKnown RBP11.21□□□□□ -0.61
PKN1-211ENST00000588200 KCTD14Q9BQ13 255 aaPredicted RBP11.21□□□□□ -0.61
PKN1-211ENST00000588200 SLC30A2Q9BRI3 323 aa11.21□□□□□ -0.61
PKN1-211ENST00000588200 C1QTNF5Q9BXJ0 243 aa11.21□□□□□ -0.61
PKN1-211ENST00000588200 MYLK2Q9H1R3 596 aa11.21□□□□□ -0.61
PKN1-211ENST00000588200 TMEM165Q9HC07 324 aa11.21□□□□□ -0.61
PKN1-211ENST00000588200 MMP26Q9NRE1 261 aa11.21□□□□□ -0.61
PKN1-211ENST00000588200 UBAP1Q9NZ09 502 aa11.21□□□□□ -0.61
PKN1-211ENST00000588200 IER3IP1Q9Y5U9 82 aa11.21□□□□□ -0.61
PKN1-211ENST00000588200 AUP1Q9Y679 476 aa11.21□□□□□ -0.61
PKN1-211ENST00000588200 LHFPL6Q9Y693 200 aa11.21□□□□□ -0.61
PKN1-211ENST00000588200 CLDN34H7C241 214 aa11.2□□□□□ -0.62
PKN1-211ENST00000588200 RER1O15258 196 aa11.2□□□□□ -0.62
PKN1-211ENST00000588200 IDH3BO43837 385 aa11.2□□□□□ -0.62
PKN1-211ENST00000588200 PPP1R3DO95685 299 aa11.2□□□□□ -0.62
PKN1-211ENST00000588200 SEMG1P04279 462 aa11.2□□□□□ -0.62
PKN1-211ENST00000588200 HKR1P10072 659 aa11.2□□□□□ -0.62
PKN1-211ENST00000588200 EGR1P18146 543 aa11.2□□□□□ -0.62
PKN1-211ENST00000588200 PRTN3P24158 256 aa11.2□□□□□ -0.62
PKN1-211ENST00000588200 SRP9P49458 86 aaKnown RBP11.2□□□□□ -0.62
PKN1-211ENST00000588200 MMP16P51512 607 aa11.2□□□□□ -0.62
PKN1-211ENST00000588200 SMIM11AP58511 58 aa11.2□□□□□ -0.62
PKN1-211ENST00000588200 PSME3P61289 254 aa11.2□□□□□ -0.62
PKN1-211ENST00000588200 ECH1Q13011 328 aa11.2□□□□□ -0.62
PKN1-211ENST00000588200 SEC23BQ15437 767 aa11.2□□□□□ -0.62
PKN1-211ENST00000588200 RFX4Q33E94 735 aa11.2□□□□□ -0.62
PKN1-211ENST00000588200 KLF17Q5JT82 389 aaPredicted RBP11.2□□□□□ -0.62
PKN1-211ENST00000588200 SLC7A6Q92536 515 aa11.2□□□□□ -0.62
PKN1-211ENST00000588200 ERGIC1Q969X5 290 aa11.2□□□□□ -0.62
PKN1-211ENST00000588200 MEGF10Q96KG7 1140 aa11.2□□□□□ -0.62
PKN1-211ENST00000588200 ZNF582Q96NG8 517 aaPredicted RBP11.2□□□□□ -0.62
PKN1-211ENST00000588200 SPAG4Q9NPE6 437 aa11.2□□□□□ -0.62
PKN1-211ENST00000588200 DDX28Q9NUL7 540 aaKnown RBP11.2□□□□□ -0.62
PKN1-211ENST00000588200 B9D1Q9UPM9 204 aa11.2□□□□□ -0.62
PKN1-211ENST00000588200 TRBV4-1A0A0J9YWV2 114 aa11.19□□□□□ -0.62
PKN1-211ENST00000588200 UNC119BA6NIH7 251 aa11.19□□□□□ -0.62
PKN1-211ENST00000588200 CEACAM18A8MTB9 384 aa11.19□□□□□ -0.62
PKN1-211ENST00000588200 DCTN6O00399 190 aa11.19□□□□□ -0.62
PKN1-211ENST00000588200 ATP8B1O43520 1251 aa11.19□□□□□ -0.62
PKN1-211ENST00000588200 DBHP09172 617 aa11.19□□□□□ -0.62
PKN1-211ENST00000588200 SELEP16581 610 aa11.19□□□□□ -0.62
PKN1-211ENST00000588200 FPR3P25089 353 aa11.19□□□□□ -0.62
PKN1-211ENST00000588200 ERFP50548 548 aa11.19□□□□□ -0.62
PKN1-211ENST00000588200 NUDT2P50583 147 aa11.19□□□□□ -0.62
PKN1-211ENST00000588200 ESCO2Q56NI9 601 aa11.19□□□□□ -0.62
PKN1-211ENST00000588200 AWAT1Q58HT5 328 aa11.19□□□□□ -0.62
PKN1-211ENST00000588200 OR6V1Q8N148 313 aa11.19□□□□□ -0.62
PKN1-211ENST00000588200 SLC26A10Q8NG04 563 aa11.19□□□□□ -0.62
PKN1-211ENST00000588200 Q8TCH9 128 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms