RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 MEGF10Q96KG7 1140 aa11.87□□□□□ -0.51
ERCC1-205ENST00000587888 ZNF582Q96NG8 517 aaPredicted RBP11.87□□□□□ -0.51
ERCC1-205ENST00000587888 SSBP3Q9BWW4 388 aaPredicted RBP11.87□□□□□ -0.51
ERCC1-205ENST00000587888 NDEL1Q9GZM8 345 aa11.87□□□□□ -0.51
ERCC1-205ENST00000587888 SYT4Q9H2B2 425 aa11.87□□□□□ -0.51
ERCC1-205ENST00000587888 ZMAT3Q9HA38 289 aaKnown RBP11.87□□□□□ -0.51
ERCC1-205ENST00000587888 NMNAT1Q9HAN9 279 aaPredicted RBP11.87□□□□□ -0.51
ERCC1-205ENST00000587888 TMEM165Q9HC07 324 aa11.87□□□□□ -0.51
ERCC1-205ENST00000587888 FGFR1OP2Q9NVK5 253 aa11.87□□□□□ -0.51
ERCC1-205ENST00000587888 IER3IP1Q9Y5U9 82 aa11.87□□□□□ -0.51
ERCC1-205ENST00000587888 OR6C6A6NF89 314 aa11.86□□□□□ -0.51
ERCC1-205ENST00000587888 A8MXK9 166 aa11.86□□□□□ -0.51
ERCC1-205ENST00000587888 SOCS2O14508 198 aa11.86□□□□□ -0.51
ERCC1-205ENST00000587888 SERPINA1P01009 418 aa11.86□□□□□ -0.51
ERCC1-205ENST00000587888 RNASE1P07998 156 aaKnown RBP11.86□□□□□ -0.51
ERCC1-205ENST00000587888 RPS2P15880 293 aaKnown RBP11.86□□□□□ -0.51
ERCC1-205ENST00000587888 OMGP23515 440 aa11.86□□□□□ -0.51
ERCC1-205ENST00000587888 MTNR1AP48039 350 aa11.86□□□□□ -0.51
ERCC1-205ENST00000587888 SRP9P49458 86 aaKnown RBP11.86□□□□□ -0.51
ERCC1-205ENST00000587888 LSM6P62312 80 aaKnown RBP11.86□□□□□ -0.51
ERCC1-205ENST00000587888 KRR1Q13601 381 aaKnown RBP11.86□□□□□ -0.51
ERCC1-205ENST00000587888 BTNL3Q6UXE8 466 aa11.86□□□□□ -0.51
ERCC1-205ENST00000587888 LRRN1Q6UXK5 716 aa11.86□□□□□ -0.51
ERCC1-205ENST00000587888 CBLL1Q75N03 491 aa11.86□□□□□ -0.51
ERCC1-205ENST00000587888 MOGAT3Q86VF5 341 aa11.86□□□□□ -0.51
ERCC1-205ENST00000587888 KLBQ86Z14 1044 aa11.86□□□□□ -0.51
ERCC1-205ENST00000587888 SLC15A3Q8IY34 581 aa11.86□□□□□ -0.51
ERCC1-205ENST00000587888 PARP8Q8N3A8 854 aa11.86□□□□□ -0.51
ERCC1-205ENST00000587888 BHLHE23Q8NDY6 225 aa11.86□□□□□ -0.51
ERCC1-205ENST00000587888 OR13G1Q8NGZ3 307 aa11.86□□□□□ -0.51
ERCC1-205ENST00000587888 HSH2DQ96JZ2 352 aa11.86□□□□□ -0.51
ERCC1-205ENST00000587888 NUAK2Q9H093 628 aa11.86□□□□□ -0.51
ERCC1-205ENST00000587888 ARMCX1Q9P291 453 aa11.86□□□□□ -0.51
ERCC1-205ENST00000587888 MIOXQ9UGB7 285 aa11.86□□□□□ -0.51
ERCC1-205ENST00000587888 LRCH1Q9Y2L9 728 aa11.86□□□□□ -0.51
ERCC1-205ENST00000587888 POLR1DQ9Y2S0 133 aa11.86□□□□□ -0.51
ERCC1-205ENST00000587888 F5H5P2 479 aa11.85□□□□□ -0.51
ERCC1-205ENST00000587888 IFNL4K9M1U5 179 aa11.85□□□□□ -0.51
ERCC1-205ENST00000587888 PTP4A3O75365 173 aa11.85□□□□□ -0.51
ERCC1-205ENST00000587888 NDUFB2O95178 105 aa11.85□□□□□ -0.51
ERCC1-205ENST00000587888 HLA-DPB1P04440 258 aa11.85□□□□□ -0.51
ERCC1-205ENST00000587888 RGS6P49758 472 aa11.85□□□□□ -0.51
ERCC1-205ENST00000587888 IL13RA1P78552 427 aa11.85□□□□□ -0.51
ERCC1-205ENST00000587888 MEP1BQ16820 701 aa11.85□□□□□ -0.51
ERCC1-205ENST00000587888 FAM201AQ5SY85 155 aa11.85□□□□□ -0.51
ERCC1-205ENST00000587888 CGB2Q6NT52 195 aa11.85□□□□□ -0.51
ERCC1-205ENST00000587888 LEG1Q6P5S2 330 aa11.85□□□□□ -0.51
ERCC1-205ENST00000587888 FBXW12Q6X9E4 464 aa11.85□□□□□ -0.51
ERCC1-205ENST00000587888 CYP4Z1Q86W10 505 aa11.85□□□□□ -0.51
ERCC1-205ENST00000587888 RAB40AQ8WXH6 277 aa11.85□□□□□ -0.51
ERCC1-205ENST00000587888 TSSK2Q96PF2 358 aa11.85□□□□□ -0.51
ERCC1-205ENST00000587888 TMEM246Q9BRR3 403 aa11.85□□□□□ -0.51
ERCC1-205ENST00000587888 WDR76Q9H967 626 aa11.85□□□□□ -0.51
ERCC1-205ENST00000587888 TNFRSF19Q9NS68 423 aa11.85□□□□□ -0.51
ERCC1-205ENST00000587888 SIGLEC7Q9Y286 467 aa11.85□□□□□ -0.51
ERCC1-205ENST00000587888 TMEM5Q9Y2B1 443 aa11.85□□□□□ -0.51
ERCC1-205ENST00000587888 AP3M1Q9Y2T2 418 aa11.85□□□□□ -0.51
ERCC1-205ENST00000587888 CAPN7Q9Y6W3 813 aa11.85□□□□□ -0.51
ERCC1-205ENST00000587888 IGHV2-70DA0A0C4DH43 119 aa11.84□□□□□ -0.51
ERCC1-205ENST00000587888 MDFIC2A0A1B0GVS7 189 aa11.84□□□□□ -0.51
ERCC1-205ENST00000587888 POM121CA8CG34 1229 aa11.84□□□□□ -0.51
ERCC1-205ENST00000587888 NCK1P16333 377 aa11.84□□□□□ -0.51
ERCC1-205ENST00000587888 SELEP16581 610 aa11.84□□□□□ -0.51
ERCC1-205ENST00000587888 SDHAP31040 664 aa11.84□□□□□ -0.51
ERCC1-205ENST00000587888 PMELP40967 661 aa11.84□□□□□ -0.51
ERCC1-205ENST00000587888 CDKN2AP42771 156 aaKnown RBP11.84□□□□□ -0.51
ERCC1-205ENST00000587888 PRSS12P56730 875 aa11.84□□□□□ -0.51
ERCC1-205ENST00000587888 PAX2Q02962 417 aa11.84□□□□□ -0.51
ERCC1-205ENST00000587888 GPR139Q6DWJ6 353 aa11.84□□□□□ -0.51
ERCC1-205ENST00000587888 CORO6Q6QEF8 472 aa11.84□□□□□ -0.51
ERCC1-205ENST00000587888 TREML4Q6UXN2 200 aa11.84□□□□□ -0.51
ERCC1-205ENST00000587888 PTCHD4Q6ZW05 846 aa11.84□□□□□ -0.51
ERCC1-205ENST00000587888 TSEN54Q7Z6J9 526 aaKnown RBP11.84□□□□□ -0.51
ERCC1-205ENST00000587888 FAM156AQ8NDB6 213 aa11.84□□□□□ -0.51
ERCC1-205ENST00000587888 SLC7A13Q8TCU3 470 aa11.84□□□□□ -0.51
ERCC1-205ENST00000587888 FAM162AQ96A26 154 aa11.84□□□□□ -0.51
ERCC1-205ENST00000587888 APOBEC3DQ96AK3 386 aaPredicted RBP11.84□□□□□ -0.51
ERCC1-205ENST00000587888 NEIL1Q96FI4 390 aaPredicted RBP11.84□□□□□ -0.51
ERCC1-205ENST00000587888 PLEKHA8Q96JA3 519 aa11.84□□□□□ -0.51
ERCC1-205ENST00000587888 VIPAS39Q9H9C1 493 aa11.84□□□□□ -0.51
ERCC1-205ENST00000587888 SRA1Q9HD15 236 aaKnown RBP11.84□□□□□ -0.51
ERCC1-205ENST00000587888 NRIP3Q9NQ35 241 aa11.84□□□□□ -0.51
ERCC1-205ENST00000587888 TMEM100Q9NV29 134 aa11.84□□□□□ -0.51
ERCC1-205ENST00000587888 VSX1Q9NZR4 365 aaPredicted RBP11.84□□□□□ -0.51
ERCC1-205ENST00000587888 RPS6KA6Q9UK32 745 aa11.84□□□□□ -0.51
ERCC1-205ENST00000587888 TRAV40A0A0B4J280 105 aa11.83□□□□□ -0.52
ERCC1-205ENST00000587888 UNC119BA6NIH7 251 aa11.83□□□□□ -0.52
ERCC1-205ENST00000587888 LRRC30A6NM36 301 aa11.83□□□□□ -0.52
ERCC1-205ENST00000587888 NME4O00746 187 aa11.83□□□□□ -0.52
ERCC1-205ENST00000587888 MLNRO43193 412 aa11.83□□□□□ -0.52
ERCC1-205ENST00000587888 H1F0P07305 194 aaKnown RBP11.83□□□□□ -0.52
ERCC1-205ENST00000587888 MDKP21741 143 aaPredicted RBP11.83□□□□□ -0.52
ERCC1-205ENST00000587888 FPR3P25089 353 aa11.83□□□□□ -0.52
ERCC1-205ENST00000587888 SLC7A2P52569 658 aa11.83□□□□□ -0.52
ERCC1-205ENST00000587888 DBPQ10586 325 aaPredicted RBP11.83□□□□□ -0.52
ERCC1-205ENST00000587888 KCNMB1Q16558 191 aa11.83□□□□□ -0.52
ERCC1-205ENST00000587888 FGD3Q5JSP0 725 aa11.83□□□□□ -0.52
ERCC1-205ENST00000587888 C16orf87Q6PH81 154 aa11.83□□□□□ -0.52
ERCC1-205ENST00000587888 LYPD2Q6UXB3 125 aa11.83□□□□□ -0.52
ERCC1-205ENST00000587888 BRD3OSQ6XYD6 125 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms