RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 ZNF181Q2M3W8 571 aa9.88□□□□□ -0.83
BRCA1-225ENST00000586385 RSPO1Q2MKA7 263 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-225ENST00000586385 CYBRD1Q53TN4 286 aa9.88□□□□□ -0.83
BRCA1-225ENST00000586385 WDR25Q64LD2 544 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-225ENST00000586385 ATG16L2Q8NAA4 619 aa9.88□□□□□ -0.83
BRCA1-225ENST00000586385 C19orf18Q8NEA5 215 aa9.88□□□□□ -0.83
BRCA1-225ENST00000586385 OR8G5Q8NG78 346 aa9.88□□□□□ -0.83
BRCA1-225ENST00000586385 OR4F5Q8NH21 305 aa9.88□□□□□ -0.83
BRCA1-225ENST00000586385 PRRC1Q96M27 445 aa9.88□□□□□ -0.83
BRCA1-225ENST00000586385 Q96M85 177 aa9.88□□□□□ -0.83
BRCA1-225ENST00000586385 ZNF583Q96ND8 569 aa9.88□□□□□ -0.83
BRCA1-225ENST00000586385 TBX15Q96SF7 602 aa9.88□□□□□ -0.83
BRCA1-225ENST00000586385 RBM4BQ9BQ04 359 aaKnown RBP9.88□□□□□ -0.83
BRCA1-225ENST00000586385 SLC30A2Q9BRI3 323 aa9.88□□□□□ -0.83
BRCA1-225ENST00000586385 WACQ9BTA9 647 aa9.88□□□□□ -0.83
BRCA1-225ENST00000586385 MMP27Q9H306 513 aa9.88□□□□□ -0.83
BRCA1-225ENST00000586385 BEX1Q9HBH7 125 aa9.88□□□□□ -0.83
BRCA1-225ENST00000586385 PTTG3PQ9NZH4 202 aa9.88□□□□□ -0.83
BRCA1-225ENST00000586385 RHCGQ9UBD6 479 aa9.88□□□□□ -0.83
BRCA1-225ENST00000586385 CTSZQ9UBR2 303 aa9.88□□□□□ -0.83
BRCA1-225ENST00000586385 TEX13CA0A0J9YWL9 993 aa9.87□□□□□ -0.83
BRCA1-225ENST00000586385 PRSS37A4D1T9 235 aa9.87□□□□□ -0.83
BRCA1-225ENST00000586385 J3KTA2 159 aa9.87□□□□□ -0.83
BRCA1-225ENST00000586385 IFNL4K9M1U5 179 aa9.87□□□□□ -0.83
BRCA1-225ENST00000586385 RER1O15258 196 aa9.87□□□□□ -0.83
BRCA1-225ENST00000586385 CFHR2P36980 270 aa9.87□□□□□ -0.83
BRCA1-225ENST00000586385 PSMB10P40306 273 aa9.87□□□□□ -0.83
BRCA1-225ENST00000586385 YAP1P46937 504 aaKnown RBP9.87□□□□□ -0.83
BRCA1-225ENST00000586385 RAD23AP54725 363 aa9.87□□□□□ -0.83
BRCA1-225ENST00000586385 PRKCDQ05655 676 aa9.87□□□□□ -0.83
BRCA1-225ENST00000586385 DBPQ10586 325 aaPredicted RBP9.87□□□□□ -0.83
BRCA1-225ENST00000586385 MAB21L1Q13394 359 aa9.87□□□□□ -0.83
BRCA1-225ENST00000586385 AQP6Q13520 282 aa9.87□□□□□ -0.83
BRCA1-225ENST00000586385 CLEC12AQ5QGZ9 265 aa9.87□□□□□ -0.83
BRCA1-225ENST00000586385 BEND6Q5SZJ8 279 aaPredicted RBP9.87□□□□□ -0.83
BRCA1-225ENST00000586385 ZNF362Q5T0B9 420 aaPredicted RBP9.87□□□□□ -0.83
BRCA1-225ENST00000586385 BRICD5Q6PL45 260 aa9.87□□□□□ -0.83
BRCA1-225ENST00000586385 C17orf107Q6ZR85 190 aa9.87□□□□□ -0.83
BRCA1-225ENST00000586385 C1QL4Q86Z23 238 aa9.87□□□□□ -0.83
BRCA1-225ENST00000586385 PCYOX1LQ8NBM8 494 aa9.87□□□□□ -0.83
BRCA1-225ENST00000586385 FAM156AQ8NDB6 213 aa9.87□□□□□ -0.83
BRCA1-225ENST00000586385 OR8B3Q8NGG8 313 aa9.87□□□□□ -0.83
BRCA1-225ENST00000586385 OR1F12Q8NHA8 337 aa9.87□□□□□ -0.83
BRCA1-225ENST00000586385 ZDHHC16Q969W1 377 aa9.87□□□□□ -0.83
BRCA1-225ENST00000586385 OR8B2Q96RD0 313 aa9.87□□□□□ -0.83
BRCA1-225ENST00000586385 CCT8L2Q96SF2 557 aa9.87□□□□□ -0.83
BRCA1-225ENST00000586385 NOX4Q9NPH5 578 aa9.87□□□□□ -0.83
BRCA1-225ENST00000586385 GMPR2Q9P2T1 348 aaKnown RBP9.87□□□□□ -0.83
BRCA1-225ENST00000586385 ASH2LQ9UBL3 628 aa9.87□□□□□ -0.83
BRCA1-225ENST00000586385 A0A087WUU8 490 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 CENPVL3A0A0U1RRI6 287 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 HTR3EA5X5Y0 456 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 IQCF6A8MYZ5 107 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 EFCAB9A8MZ26 197 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 PHYHO14832 338 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 TNFRSF13BO14836 293 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-225ENST00000586385 TSPAN15O95858 294 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 HLA-DPB1P04440 258 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 CD14P08571 375 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 KDELR2P33947 212 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 GUCA1AP43080 201 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-225ENST00000586385 GATA4P43694 442 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 PROK1P58294 105 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 HIST1H3AP68431 136 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 ST3GAL3Q11203 375 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 KRTAP27-1Q3LI81 207 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 HIST2H3PS2Q5TEC6 136 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 AGBL2Q5U5Z8 902 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 TBPL2Q6SJ96 375 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 COLCA1Q6ZS62 124 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 HIST2H3AQ71DI3 136 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 TSEN54Q7Z6J9 526 aaKnown RBP9.86□□□□□ -0.83
BRCA1-225ENST00000586385 OAFQ86UD1 273 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 OFCC1Q8IZS5 231 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 TMEM86BQ8N661 226 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 BHLHE23Q8NDY6 225 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 OR8J3Q8NGG0 315 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 OR13G1Q8NGZ3 307 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 LINC01006Q8NI28 216 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 RASD2Q96D21 266 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 PLEKHA8Q96JA3 519 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 WDR76Q9H967 626 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 CLN8Q9UBY8 286 aa9.86□□□□□ -0.83
BRCA1-225ENST00000586385 COA3Q9Y2R0 106 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-225ENST00000586385 J3QW42 95 aa9.85□□□□□ -0.83
BRCA1-225ENST00000586385 M0QZ24 198 aa9.85□□□□□ -0.83
BRCA1-225ENST00000586385 FAM20BO75063 409 aa9.85□□□□□ -0.83
BRCA1-225ENST00000586385 CLPXO76031 633 aa9.85□□□□□ -0.83
BRCA1-225ENST00000586385 VIMP08670 466 aaKnown RBP9.85□□□□□ -0.83
BRCA1-225ENST00000586385 ANOS1P23352 680 aa9.85□□□□□ -0.83
BRCA1-225ENST00000586385 GPR4P46093 362 aa9.85□□□□□ -0.83
BRCA1-225ENST00000586385 SLC9A3P48764 834 aa9.85□□□□□ -0.83
BRCA1-225ENST00000586385 SRP9P49458 86 aaKnown RBP9.85□□□□□ -0.83
BRCA1-225ENST00000586385 FXYD6P3P58550 94 aa9.85□□□□□ -0.83
BRCA1-225ENST00000586385 LSM6P62312 80 aaKnown RBP9.85□□□□□ -0.83
BRCA1-225ENST00000586385 MPPED2Q15777 294 aa9.85□□□□□ -0.83
BRCA1-225ENST00000586385 KCNMB1Q16558 191 aa9.85□□□□□ -0.83
BRCA1-225ENST00000586385 LRRC23Q53EV4 343 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-225ENST00000586385 TTMPQ5BVD1 217 aa9.85□□□□□ -0.83
BRCA1-225ENST00000586385 DCDC5Q6ZRR9 648 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms