RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 A3GALT2U3KPV4 340 aa5.46□□□□□ -1.54
LIG3-206ENST00000586058 CEP250Q9BV73 2442 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 SPEGQ15772 3267 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 NCOA6Q14686 2063 aaPredicted RBP5.45□□□□□ -1.54
LIG3-206ENST00000586058 IGKV1D-43A0A0B4J1Z2 117 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 ACOD1A6NK06 481 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 C1QTNF9BB2RNN3 333 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 RPL36A-HNRNPH2H7BZ11 118 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 M0R135 149 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 MAGEB3O15480 346 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 SYT7O43581 403 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 TMEM127O75204 238 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 MTRF1O75570 445 aaKnown RBP5.45□□□□□ -1.54
LIG3-206ENST00000586058 GPX5O75715 221 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 MPZL1O95297 269 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 IGHV3-9P01782 118 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 RAF1P04049 648 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 ERCC1P07992 297 aaPredicted RBP5.45□□□□□ -1.54
LIG3-206ENST00000586058 ADRA2AP08913 450 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 FAM87AP0C7U9 286 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 C1QTNF9P0C862 333 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 TMIGD3P0DMS9 266 aaPredicted RBP5.45□□□□□ -1.54
LIG3-206ENST00000586058 CD79AP11912 226 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 RAB3BP20337 219 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 MPGP29372 298 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 SDC2P34741 201 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 APLNRP35414 380 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 TALDO1P37837 337 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 GNALP38405 381 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 OPRL1P41146 370 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 CRYBB2P43320 205 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 CAPZA1P52907 286 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 GALK2Q01415 458 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 HNRNPA0Q13151 305 aaKnown RBP5.45□□□□□ -1.54
LIG3-206ENST00000586058 ZNF846Q147U1 533 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 ODF4Q2M2E3 257 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 GFOD2Q3B7J2 385 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 PLEKHN1Q494U1 663 aaPredicted RBP5.45□□□□□ -1.54
LIG3-206ENST00000586058 ZMAT1Q5H9K5 638 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 WDR38Q5JTN6 314 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 TSPO2Q5TGU0 170 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 FBXW9Q5XUX1 488 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 FDX2Q6P4F2 183 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 ANKRD16Q6P6B7 361 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 CD200R1LQ6Q8B3 271 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 C19orf48Q6RUI8 117 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 CFAP77Q6ZQR2 320 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 BEND4Q6ZU67 534 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 CATSPERDQ86XM0 798 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 SIAH3Q8IW03 269 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 CCDC36Q8IYA8 594 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 GCNT2Q8N0V5 402 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 NKAIN3Q8N8D7 197 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 ZIC4Q8N9L1 334 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 ZNF485Q8NCK3 441 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 OR52H1Q8NGJ2 320 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 OR2G2Q8NGZ5 317 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 ABHD4Q8TB40 342 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 DYNC2LI1Q8TCX1 351 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 ST7LQ8TDW4 575 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 ACOT12Q8WYK0 555 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 PHF21AQ96BD5 680 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 ITPKCQ96DU7 683 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 LRRC46Q96FV0 321 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 ZNF799Q96GE5 643 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 PGLYRP3Q96LB9 341 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 OR14A2Q96R54 314 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 TAAR6Q96RI8 345 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 PDCD1LG2Q9BQ51 273 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 ZNF649Q9BS31 505 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 OR10A2Q9H208 303 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 TPK1Q9H3S4 243 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 SMURF1Q9HCE7 757 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 BRD7Q9NPI1 651 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 SLC7A10Q9NS82 523 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 DDX28Q9NUL7 540 aaKnown RBP5.45□□□□□ -1.54
LIG3-206ENST00000586058 NUFIP1Q9UHK0 495 aaKnown RBP5.45□□□□□ -1.54
LIG3-206ENST00000586058 OR52A1Q9UKL2 312 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 N6AMT1Q9Y5N5 214 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 CNTRLQ7Z7A1 2325 aa5.45□□□□□ -1.54
LIG3-206ENST00000586058 CUL9Q8IWT3 2517 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 TRAV1-2A0A0B4J238 106 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 LOC107986453A0A1B0GWG9 222 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 MBD3L4A6NDZ8 208 aaPredicted RBP5.44□□□□□ -1.54
LIG3-206ENST00000586058 MBD3L3A6NE82 208 aaPredicted RBP5.44□□□□□ -1.54
LIG3-206ENST00000586058 MBD3L5A6NJ08 208 aaPredicted RBP5.44□□□□□ -1.54
LIG3-206ENST00000586058 TTLL8A6PVC2 850 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 E9PI62 339 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 F5H5K5 113 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 RER1O15258 196 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 MAGEB4O15481 346 aaPredicted RBP5.44□□□□□ -1.54
LIG3-206ENST00000586058 XRCC2O43543 280 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 SLC19A2O60779 497 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 ZFPL1O95159 310 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 ABHD16AO95870 558 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 TGM6O95932 706 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 WNT11O96014 354 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 PDGFAP04085 211 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 ISG15P05161 165 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 EDN3P14138 238 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms