RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	MOG	Q16653	247 aa		11.33	□□□□□ -0.6
SREBF1-223	ENST00000584760	SLC18B1	Q6NT16	456 aa		11.33	□□□□□ -0.6
SREBF1-223	ENST00000584760	CORO6	Q6QEF8	472 aa		11.33	□□□□□ -0.6
SREBF1-223	ENST00000584760	ARL9	Q6T311	187 aa		11.33	□□□□□ -0.6
SREBF1-223	ENST00000584760	CFAP77	Q6ZQR2	320 aa		11.33	□□□□□ -0.6
SREBF1-223	ENST00000584760	CYB561A3	Q8NBI2	242 aa		11.33	□□□□□ -0.6
SREBF1-223	ENST00000584760	GJC3	Q8NFK1	279 aa		11.33	□□□□□ -0.6
SREBF1-223	ENST00000584760	OR4Q3	Q8NH05	313 aa		11.33	□□□□□ -0.6
SREBF1-223	ENST00000584760	MSI2	Q96DH6	328 aa	Known RBP	11.33	□□□□□ -0.6
SREBF1-223	ENST00000584760	COQ7	Q99807	217 aa		11.33	□□□□□ -0.6
SREBF1-223	ENST00000584760	NIPSNAP1	Q9BPW8	284 aa		11.33	□□□□□ -0.6
SREBF1-223	ENST00000584760	ZNF275	Q9NSD4	429 aa	Predicted RBP	11.33	□□□□□ -0.6
SREBF1-223	ENST00000584760	MRPL22	Q9NWU5	206 aa	Known RBP	11.33	□□□□□ -0.6
SREBF1-223	ENST00000584760	CGGBP1	Q9UFW8	167 aa	Predicted RBP	11.33	□□□□□ -0.6
SREBF1-223	ENST00000584760	POMP	Q9Y244	141 aa		11.33	□□□□□ -0.6
SREBF1-223	ENST00000584760	TCRBV3S1	A0A5B6	114 aa		11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	IGHV1-46	P01743	117 aa		11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	ADH4	P08319	380 aa		11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	TUBG1	P23258	451 aa		11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	IGFBP5	P24593	272 aa		11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	ZNF81	P51508	661 aa		11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	TEK	Q02763	1124 aa		11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	BNIP1	Q12981	228 aa		11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	PSG7	Q13046	419 aa		11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	KRTAP27-1	Q3LI81	207 aa		11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	FAM209A	Q5JX71	171 aa		11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	CD300LD	Q6UXZ3	194 aa		11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	TMEM179B	Q7Z7N9	219 aa		11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	LINC00346	Q8IVM7	164 aa		11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	SLC37A3	Q8NCC5	494 aa		11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	HPS1	Q92902	700 aa		11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	DCLRE1C	Q96SD1	692 aa	Known RBP	11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	FEV	Q99581	238 aa		11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	RBM4	Q9BWF3	364 aa	Known RBP	11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	TSSK6	Q9BXA6	273 aa		11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	PNRC2	Q9NPJ4	139 aa	Known RBP	11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	TUBG2	Q9NRH3	451 aa		11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	ARMC1	Q9NVT9	282 aa		11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	CYB5R1	Q9UHQ9	305 aa		11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	KLHL21	Q9UJP4	597 aa		11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	BAIAP2	Q9UQB8	552 aa		11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	GRIP1	Q9Y3R0	1128 aa		11.32	□□□□□ -0.6
SREBF1-223	ENST00000584760	DYSF	O75923	2080 aa		11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	PLSCR5	A0PG75	271 aa		11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760		J3QW42	95 aa		11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	WIPF1	O43516	503 aa		11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	PSKH1	P11801	424 aa		11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	PYCR1	P32322	319 aa		11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	LIPA	P38571	399 aa		11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	GPR6	P46095	362 aa	Predicted RBP	11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	CRMP1	Q14194	572 aa		11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	TST	Q16762	297 aa	Known RBP	11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	RSPO1	Q2MKA7	263 aa	Predicted RBP	11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	SLC36A3	Q495N2	470 aa		11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	ZMAT1	Q5H9K5	638 aa		11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	FAM120AOS	Q5T036	256 aa		11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	SPATA24	Q86W54	205 aa		11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	PAPD5	Q8NDF8	572 aa	Known RBP	11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	PROKR2	Q8NFJ6	384 aa		11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	OR2T33	Q8NG76	320 aa		11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	OR2T4	Q8NH00	348 aa		11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	GIPC3	Q8TF64	312 aa		11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	ZNRF4	Q8WWF5	429 aa		11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	CADM1	Q9BY67	442 aa	Known RBP	11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	NMNAT2	Q9BZQ4	307 aa		11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	SAP30L	Q9HAJ7	183 aa		11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	CYSLTR2	Q9NS75	346 aa		11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	KCNG2	Q9UJ96	466 aa		11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	KCNS2	Q9ULS6	477 aa		11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	STARD10	Q9Y365	291 aa		11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	COMMD3-BMI1	R4GMX3	469 aa		11.31	□□□□□ -0.6
SREBF1-223	ENST00000584760	IGHV1-69-2	A0A0G2JMI3	117 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	LOC100289279	A0A1B0GTE1	492 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	WNT9B	O14905	357 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	GSC2	O15499	205 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	SPRY3	O43610	288 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	TIMM8A	O60220	97 aa	Predicted RBP	11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	CDC14B	O60729	498 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	FKBP6	O75344	327 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	HLA-DQA2	P01906	255 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	KITLG	P21583	273 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	CRYBB2	P43320	205 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	RGS6	P49758	472 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	ERF	P50548	548 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	SLC25A1	P53007	311 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	TMEM33	P57088	247 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	CCNI	Q14094	377 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	LIPN	Q5VXI9	398 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	FAM166A	Q6J272	317 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	LYPD4	Q6UWN0	246 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	USP51	Q70EK9	711 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	HS3ST5	Q8IZT8	346 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	OR9Q1	Q8NGQ5	310 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	APOBEC3D	Q96AK3	386 aa	Predicted RBP	11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	SLCO4A1	Q96BD0	722 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	C1orf159	Q96HA4	380 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	MAP6	Q96JE9	813 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	COG8	Q96MW5	612 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	ATF6B	Q99941	703 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	MSL2	Q9HCI7	577 aa		11.3	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms