RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 OR2M5A3KFT3 312 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 PRSS37A4D1T9 235 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 TRIM64BA6NI03 449 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 FAM171A2A8MVW0 826 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 ZNF561-AS1K7EIQ3 104 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 PHYHO14832 338 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 DNPH1O43598 174 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 AKR7A3O95154 331 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 VAMP5O95183 116 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 PMS2P2O95744 297 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 KNG1P01042 644 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 HLA-DQA2P01906 255 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 TACSTD2P09758 323 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 CLUP10909 449 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 CPEP16870 476 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 GBX2P52951 348 aaPredicted RBP9.01□□□□□ -0.97
SS18-221ENST00000582448 VBP1P61758 197 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 ACSM1Q08AH1 577 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 DYNC1I2Q13409 638 aaKnown RBP9.01□□□□□ -0.97
SS18-221ENST00000582448 GPR50Q13585 617 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 TPBGQ13641 420 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 TRAM1Q15629 374 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 OR2G6Q5TZ20 316 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 LIPKQ5VXJ0 399 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 SHEQ5VZ18 495 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 PAQR6Q6TCH4 344 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 ZNF322Q6U7Q0 402 aaPredicted RBP9.01□□□□□ -0.97
SS18-221ENST00000582448 B3GLCTQ6Y288 498 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 PLEKHG7Q6ZR37 379 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 TMPPEQ6ZT21 453 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 SLC35D2Q76EJ3 337 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 SLC16A9Q7RTY1 509 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 FAM220AQ7Z4H9 259 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 EGFL6Q8IUX8 553 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 SYS1Q8N2H4 156 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 CIARTQ8N365 385 aaPredicted RBP9.01□□□□□ -0.97
SS18-221ENST00000582448 STPG3Q8N7X2 389 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 TMEM99Q8N816 258 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 OR51L1Q8NGJ5 315 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 OR5M1Q8NGP8 315 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 FNDC8Q8TC99 324 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 SPRYD4Q8WW59 207 aaPredicted RBP9.01□□□□□ -0.97
SS18-221ENST00000582448 SFXN2Q96NB2 322 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 RBP7Q96R05 134 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 COQ7Q99807 217 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 SSBP3Q9BWW4 388 aaPredicted RBP9.01□□□□□ -0.97
SS18-221ENST00000582448 SYT4Q9H2B2 425 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 PLEKHF2Q9H8W4 249 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 SMURF1Q9HCE7 757 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 RASD1Q9Y272 281 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 GSTK1Q9Y2Q3 226 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 FKBP7Q9Y680 259 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 MPDZO75970 2070 aa9.01□□□□□ -0.97
SS18-221ENST00000582448 ZNF726A6NNF4 738 aa9□□□□□ -0.97
SS18-221ENST00000582448 AHRRA9YTQ3 701 aa9□□□□□ -0.97
SS18-221ENST00000582448 H7C1C5 153 aa9□□□□□ -0.97
SS18-221ENST00000582448 H7C1Q1 480 aa9□□□□□ -0.97
SS18-221ENST00000582448 J3QLW9 94 aa9□□□□□ -0.97
SS18-221ENST00000582448 J3QRE1 110 aa9□□□□□ -0.97
SS18-221ENST00000582448 SLC16A7O60669 478 aa9□□□□□ -0.97
SS18-221ENST00000582448 HLA-DPB1P04440 258 aa9□□□□□ -0.97
SS18-221ENST00000582448 ZNF19P17023 458 aa9□□□□□ -0.97
SS18-221ENST00000582448 ZNF182P17025 639 aaPredicted RBP9□□□□□ -0.97
SS18-221ENST00000582448 ZNF43P17038 809 aa9□□□□□ -0.97
SS18-221ENST00000582448 CD53P19397 219 aa9□□□□□ -0.97
SS18-221ENST00000582448 IL11P20809 199 aa9□□□□□ -0.97
SS18-221ENST00000582448 PAX7P23759 505 aa9□□□□□ -0.97
SS18-221ENST00000582448 GABRA5P31644 462 aa9□□□□□ -0.97
SS18-221ENST00000582448 UGT2B10P36537 528 aa9□□□□□ -0.97
SS18-221ENST00000582448 NAA10P41227 235 aaPredicted RBP9□□□□□ -0.97
SS18-221ENST00000582448 CLRN1P58418 232 aa9□□□□□ -0.97
SS18-221ENST00000582448 LCN6P62502 163 aa9□□□□□ -0.97
SS18-221ENST00000582448 GLO1Q04760 184 aa9□□□□□ -0.97
SS18-221ENST00000582448 MRPL28Q13084 256 aaKnown RBP9□□□□□ -0.97
SS18-221ENST00000582448 SPCS2Q15005 226 aa9□□□□□ -0.97
SS18-221ENST00000582448 HYAL4Q2M3T9 481 aa9□□□□□ -0.97
SS18-221ENST00000582448 EEF1A1P5Q5VTE0 462 aa9□□□□□ -0.97
SS18-221ENST00000582448 KCTD20Q7Z5Y7 419 aa9□□□□□ -0.97
SS18-221ENST00000582448 GPAT4Q86UL3 456 aa9□□□□□ -0.97
SS18-221ENST00000582448 KLBQ86Z14 1044 aa9□□□□□ -0.97
SS18-221ENST00000582448 PHC2Q8IXK0 858 aa9□□□□□ -0.97
SS18-221ENST00000582448 PM20D2Q8IYS1 436 aa9□□□□□ -0.97
SS18-221ENST00000582448 NEIL3Q8TAT5 605 aa9□□□□□ -0.97
SS18-221ENST00000582448 ZNF519Q8TB69 540 aa9□□□□□ -0.97
SS18-221ENST00000582448 NTNG2Q96CW9 530 aa9□□□□□ -0.97
SS18-221ENST00000582448 ADAD1Q96M93 576 aaKnown RBP9□□□□□ -0.97
SS18-221ENST00000582448 KLHL15Q96M94 604 aa9□□□□□ -0.97
SS18-221ENST00000582448 OXGR1Q96P68 337 aa9□□□□□ -0.97
SS18-221ENST00000582448 TRIB1Q96RU8 372 aa9□□□□□ -0.97
SS18-221ENST00000582448 INTS14Q96SY0 518 aa9□□□□□ -0.97
SS18-221ENST00000582448 DDOQ99489 341 aa9□□□□□ -0.97
SS18-221ENST00000582448 NPAS1Q99742 590 aa9□□□□□ -0.97
SS18-221ENST00000582448 KRTAP4-11Q9BYQ6 195 aa9□□□□□ -0.97
SS18-221ENST00000582448 DCSTAMPQ9H295 470 aa9□□□□□ -0.97
SS18-221ENST00000582448 PROK2Q9HC23 129 aa9□□□□□ -0.97
SS18-221ENST00000582448 FANCFQ9NPI8 374 aa9□□□□□ -0.97
SS18-221ENST00000582448 BEX4Q9NWD9 120 aaPredicted RBP9□□□□□ -0.97
SS18-221ENST00000582448 VSX1Q9NZR4 365 aaPredicted RBP9□□□□□ -0.97
SS18-221ENST00000582448 ZNF629Q9UEG4 869 aaPredicted RBP9□□□□□ -0.97
SS18-221ENST00000582448 LAMP5Q9UJQ1 280 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms