RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 LINC01356Q8N9X3 169 aa16.59■□□□□ 0.25
SREBF1-220ENST00000581707 CYB561A3Q8NBI2 242 aa16.59■□□□□ 0.25
SREBF1-220ENST00000581707 CMBLQ96DG6 245 aa16.59■□□□□ 0.25
SREBF1-220ENST00000581707 DDOQ99489 341 aa16.59■□□□□ 0.25
SREBF1-220ENST00000581707 COQ7Q99807 217 aa16.59■□□□□ 0.25
SREBF1-220ENST00000581707 CDADC1Q9BWV3 514 aa16.59■□□□□ 0.25
SREBF1-220ENST00000581707 TSSK6Q9BXA6 273 aa16.59■□□□□ 0.25
SREBF1-220ENST00000581707 EGLN1Q9GZT9 426 aa16.59■□□□□ 0.25
SREBF1-220ENST00000581707 SHARPINQ9H0F6 387 aa16.59■□□□□ 0.25
SREBF1-220ENST00000581707 NARFLQ9H6Q4 476 aa16.59■□□□□ 0.25
SREBF1-220ENST00000581707 TBC1D23Q9NUY8 699 aa16.59■□□□□ 0.25
SREBF1-220ENST00000581707 ZDHHC8Q9ULC8 765 aa16.59■□□□□ 0.25
SREBF1-220ENST00000581707 CST1P01037 141 aa16.58■□□□□ 0.24
SREBF1-220ENST00000581707 IFNA2P01563 188 aa16.58■□□□□ 0.24
SREBF1-220ENST00000581707 ADH4P08319 380 aa16.58■□□□□ 0.24
SREBF1-220ENST00000581707 IGFBP5P24593 272 aa16.58■□□□□ 0.24
SREBF1-220ENST00000581707 RGS6P49758 472 aa16.58■□□□□ 0.24
SREBF1-220ENST00000581707 GK3PQ14409 553 aa16.58■□□□□ 0.24
SREBF1-220ENST00000581707 ZNF362Q5T0B9 420 aaPredicted RBP16.58■□□□□ 0.24
SREBF1-220ENST00000581707 SLC18B1Q6NT16 456 aa16.58■□□□□ 0.24
SREBF1-220ENST00000581707 LINC00346Q8IVM7 164 aa16.58■□□□□ 0.24
SREBF1-220ENST00000581707 LNX2Q8N448 690 aa16.58■□□□□ 0.24
SREBF1-220ENST00000581707 OR2AJ1Q8NGZ0 328 aa16.58■□□□□ 0.24
SREBF1-220ENST00000581707 CLDND2Q8NHS1 167 aa16.58■□□□□ 0.24
SREBF1-220ENST00000581707 CANT1Q8WVQ1 401 aa16.58■□□□□ 0.24
SREBF1-220ENST00000581707 PTP4A1Q93096 173 aa16.58■□□□□ 0.24
SREBF1-220ENST00000581707 HAVCR1Q96D42 359 aa16.58■□□□□ 0.24
SREBF1-220ENST00000581707 ELMOD3Q96FG2 381 aa16.58■□□□□ 0.24
SREBF1-220ENST00000581707 C1orf159Q96HA4 380 aa16.58■□□□□ 0.24
SREBF1-220ENST00000581707 DIRC2Q96SL1 478 aa16.58■□□□□ 0.24
SREBF1-220ENST00000581707 MSL2Q9HCI7 577 aa16.58■□□□□ 0.24
SREBF1-220ENST00000581707 PURGQ9UJV8 347 aaKnown RBP16.58■□□□□ 0.24
SREBF1-220ENST00000581707 SVEP1Q4LDE5 3571 aa16.57■□□□□ 0.24
SREBF1-220ENST00000581707 DHRS12A0PJE2 317 aa16.57■□□□□ 0.24
SREBF1-220ENST00000581707 J3QW42 95 aa16.57■□□□□ 0.24
SREBF1-220ENST00000581707 WNT9BO14905 357 aa16.57■□□□□ 0.24
SREBF1-220ENST00000581707 SOX14O95416 240 aa16.57■□□□□ 0.24
SREBF1-220ENST00000581707 FAM157CP0CG43 387 aa16.57■□□□□ 0.24
SREBF1-220ENST00000581707 HOXB6P17509 224 aaKnown RBP16.57■□□□□ 0.24
SREBF1-220ENST00000581707 KITLGP21583 273 aa16.57■□□□□ 0.24
SREBF1-220ENST00000581707 PYCR1P32322 319 aa16.57■□□□□ 0.24
SREBF1-220ENST00000581707 GGT2P36268 569 aa16.57■□□□□ 0.24
SREBF1-220ENST00000581707 CDH15P55291 814 aa16.57■□□□□ 0.24
SREBF1-220ENST00000581707 HFEQ30201 348 aa16.57■□□□□ 0.24
SREBF1-220ENST00000581707 CFAP77Q6ZQR2 320 aa16.57■□□□□ 0.24
SREBF1-220ENST00000581707 PROKR2Q8NFJ6 384 aa16.57■□□□□ 0.24
SREBF1-220ENST00000581707 OR10G2Q8NGC3 310 aa16.57■□□□□ 0.24
SREBF1-220ENST00000581707 OR5L1Q8NGL2 311 aa16.57■□□□□ 0.24
SREBF1-220ENST00000581707 OR2T4Q8NH00 348 aa16.57■□□□□ 0.24
SREBF1-220ENST00000581707 GIPC3Q8TF64 312 aa16.57■□□□□ 0.24
SREBF1-220ENST00000581707 SLC7A6OSQ96CW6 309 aaPredicted RBP16.57■□□□□ 0.24
SREBF1-220ENST00000581707 PITX2Q99697 317 aa16.57■□□□□ 0.24
SREBF1-220ENST00000581707 MRPL22Q9NWU5 206 aaKnown RBP16.57■□□□□ 0.24
SREBF1-220ENST00000581707 CYB5R1Q9UHQ9 305 aa16.57■□□□□ 0.24
SREBF1-220ENST00000581707 BAIAP2Q9UQB8 552 aa16.57■□□□□ 0.24
SREBF1-220ENST00000581707 CACNG2Q9Y698 323 aa16.57■□□□□ 0.24
SREBF1-220ENST00000581707 ZNF823P16415 610 aa16.56■□□□□ 0.24
SREBF1-220ENST00000581707 CDK5R2Q13319 367 aa16.56■□□□□ 0.24
SREBF1-220ENST00000581707 FLOT2Q14254 428 aa16.56■□□□□ 0.24
SREBF1-220ENST00000581707 RSPO1Q2MKA7 263 aaPredicted RBP16.56■□□□□ 0.24
SREBF1-220ENST00000581707 FAM120AOSQ5T036 256 aa16.56■□□□□ 0.24
SREBF1-220ENST00000581707 CD300LDQ6UXZ3 194 aa16.56■□□□□ 0.24
SREBF1-220ENST00000581707 SLC37A3Q8NCC5 494 aa16.56■□□□□ 0.24
SREBF1-220ENST00000581707 OR2T33Q8NG76 320 aa16.56■□□□□ 0.24
SREBF1-220ENST00000581707 OR4Q3Q8NH05 313 aa16.56■□□□□ 0.24
SREBF1-220ENST00000581707 APOBEC3DQ96AK3 386 aaPredicted RBP16.56■□□□□ 0.24
SREBF1-220ENST00000581707 FEVQ99581 238 aa16.56■□□□□ 0.24
SREBF1-220ENST00000581707 NIPSNAP1Q9BPW8 284 aa16.56■□□□□ 0.24
SREBF1-220ENST00000581707 ARMC1Q9NVT9 282 aa16.56■□□□□ 0.24
SREBF1-220ENST00000581707 TREM2Q9NZC2 230 aa16.56■□□□□ 0.24
SREBF1-220ENST00000581707 KCNG2Q9UJ96 466 aa16.56■□□□□ 0.24
SREBF1-220ENST00000581707 COL6A5A8TX70 2615 aa16.55■□□□□ 0.24
SREBF1-220ENST00000581707 MXRA5Q9NR99 2828 aa16.55■□□□□ 0.24
SREBF1-220ENST00000581707 B4DSR2 109 aa16.55■□□□□ 0.24
SREBF1-220ENST00000581707 CLDN25C9JDP6 229 aa16.55■□□□□ 0.24
SREBF1-220ENST00000581707 GNGT2O14610 69 aa16.55■□□□□ 0.24
SREBF1-220ENST00000581707 DNAJC8O75937 253 aaPredicted RBP16.55■□□□□ 0.24
SREBF1-220ENST00000581707 CD55P08174 381 aa16.55■□□□□ 0.24
SREBF1-220ENST00000581707 RAC2P15153 192 aa16.55■□□□□ 0.24
SREBF1-220ENST00000581707 MVKQ03426 396 aa16.55■□□□□ 0.24
SREBF1-220ENST00000581707 ECH1Q13011 328 aa16.55■□□□□ 0.24
SREBF1-220ENST00000581707 SPATA24Q86W54 205 aa16.55■□□□□ 0.24
SREBF1-220ENST00000581707 OR51L1Q8NGJ5 315 aa16.55■□□□□ 0.24
SREBF1-220ENST00000581707 ZNRF4Q8WWF5 429 aa16.55■□□□□ 0.24
SREBF1-220ENST00000581707 CCL17Q92583 94 aa16.55■□□□□ 0.24
SREBF1-220ENST00000581707 RBM4Q9BWF3 364 aaKnown RBP16.55■□□□□ 0.24
SREBF1-220ENST00000581707 PTTG3PQ9NZH4 202 aa16.55■□□□□ 0.24
SREBF1-220ENST00000581707 ARRDC5A6NEK1 342 aa16.54■□□□□ 0.24
SREBF1-220ENST00000581707 IFNGP01579 166 aa16.54■□□□□ 0.24
SREBF1-220ENST00000581707 HNF1AP20823 631 aa16.54■□□□□ 0.24
SREBF1-220ENST00000581707 TNFSF4P23510 183 aa16.54■□□□□ 0.24
SREBF1-220ENST00000581707 LMO4P61968 165 aa16.54■□□□□ 0.24
SREBF1-220ENST00000581707 TNFAIP6P98066 277 aaPredicted RBP16.54■□□□□ 0.24
SREBF1-220ENST00000581707 CRMP1Q14194 572 aa16.54■□□□□ 0.24
SREBF1-220ENST00000581707 HLXQ14774 488 aaPredicted RBP16.54■□□□□ 0.24
SREBF1-220ENST00000581707 CR1LQ2VPA4 569 aa16.54■□□□□ 0.24
SREBF1-220ENST00000581707 KRTAP27-1Q3LI81 207 aa16.54■□□□□ 0.24
SREBF1-220ENST00000581707 SPRNQ5BIV9 151 aa16.54■□□□□ 0.24
SREBF1-220ENST00000581707 AVPI1Q5T686 147 aa16.54■□□□□ 0.24
SREBF1-220ENST00000581707 FBXW12Q6X9E4 464 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms