RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 WDR31Q8NA23 367 aa12.1□□□□□ -0.47
TSEN54-206ENST00000579449 ASB5Q8WWX0 329 aa12.1□□□□□ -0.47
TSEN54-206ENST00000579449 UFD1Q92890 307 aa12.1□□□□□ -0.47
TSEN54-206ENST00000579449 ATF6BQ99941 703 aa12.1□□□□□ -0.47
TSEN54-206ENST00000579449 HDHD2Q9H0R4 259 aa12.1□□□□□ -0.47
TSEN54-206ENST00000579449 ELOVL5Q9NYP7 299 aa12.1□□□□□ -0.47
TSEN54-206ENST00000579449 COQ3Q9NZJ6 369 aa12.1□□□□□ -0.47
TSEN54-206ENST00000579449 ST6GALNAC2Q9UJ37 374 aa12.1□□□□□ -0.47
TSEN54-206ENST00000579449 PRR14LQ5THK1 2151 aa12.1□□□□□ -0.47
TSEN54-206ENST00000579449 HIVEP3Q5T1R4 2406 aa12.1□□□□□ -0.47
TSEN54-206ENST00000579449 KMT2BQ9UMN6 2715 aaPredicted RBP12.09□□□□□ -0.47
TSEN54-206ENST00000579449 ARPC4-TTLL3A0A0A6YYG9 625 aa12.09□□□□□ -0.47
TSEN54-206ENST00000579449 DPPA5A6NC42 116 aa12.09□□□□□ -0.47
TSEN54-206ENST00000579449 OR6C6A6NF89 314 aa12.09□□□□□ -0.47
TSEN54-206ENST00000579449 OGG1O15527 345 aa12.09□□□□□ -0.47
TSEN54-206ENST00000579449 SRSF10O75494 262 aaKnown RBP12.09□□□□□ -0.47
TSEN54-206ENST00000579449 HSD11B1P28845 292 aa12.09□□□□□ -0.47
TSEN54-206ENST00000579449 HOXC12P31275 282 aa12.09□□□□□ -0.47
TSEN54-206ENST00000579449 TGFBR2P37173 567 aa12.09□□□□□ -0.47
TSEN54-206ENST00000579449 HTR5AP47898 357 aa12.09□□□□□ -0.47
TSEN54-206ENST00000579449 TGM4P49221 684 aa12.09□□□□□ -0.47
TSEN54-206ENST00000579449 MRPL28Q13084 256 aaKnown RBP12.09□□□□□ -0.47
TSEN54-206ENST00000579449 TPBGQ13641 420 aa12.09□□□□□ -0.47
TSEN54-206ENST00000579449 SSX1Q16384 188 aa12.09□□□□□ -0.47
TSEN54-206ENST00000579449 GSG1Q2KHT4 349 aa12.09□□□□□ -0.47
TSEN54-206ENST00000579449 RSPO1Q2MKA7 263 aaPredicted RBP12.09□□□□□ -0.47
TSEN54-206ENST00000579449 SLC25A35Q3KQZ1 300 aa12.09□□□□□ -0.47
TSEN54-206ENST00000579449 LIPKQ5VXJ0 399 aa12.09□□□□□ -0.47
TSEN54-206ENST00000579449 MDP1Q86V88 176 aa12.09□□□□□ -0.47
TSEN54-206ENST00000579449 C17orf78Q8N4C9 275 aa12.09□□□□□ -0.47
TSEN54-206ENST00000579449 CPEB3Q8NE35 698 aaKnown RBP12.09□□□□□ -0.47
TSEN54-206ENST00000579449 OR1F12Q8NHA8 337 aa12.09□□□□□ -0.47
TSEN54-206ENST00000579449 HAVCR2Q8TDQ0 301 aa12.09□□□□□ -0.47
TSEN54-206ENST00000579449 SLC7A6Q92536 515 aa12.09□□□□□ -0.47
TSEN54-206ENST00000579449 YIPF6Q96EC8 236 aa12.09□□□□□ -0.47
TSEN54-206ENST00000579449 KCNJ15Q99712 375 aa12.09□□□□□ -0.47
TSEN54-206ENST00000579449 COQ7Q99807 217 aa12.09□□□□□ -0.47
TSEN54-206ENST00000579449 HDHD5Q9BXW7 423 aa12.09□□□□□ -0.47
TSEN54-206ENST00000579449 NIPAL2Q9H841 368 aa12.09□□□□□ -0.47
TSEN54-206ENST00000579449 ERRFI1Q9UJM3 462 aaPredicted RBP12.09□□□□□ -0.47
TSEN54-206ENST00000579449 R4GMQ9 66 aa12.09□□□□□ -0.47
TSEN54-206ENST00000579449 OR5H1A6NKK0 313 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 FAM90A27PA6NNH2 459 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 CCRL2O00421 344 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 PNPP00491 289 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 DBHP09172 617 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 CELP19835 753 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 CRYGSP22914 178 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 DCTDP32321 178 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 TTKP33981 857 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 CX3CR1P49238 355 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 RGS6P49758 472 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 ASCL1P50553 236 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 PRKXP51817 358 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 NANOS3P60323 173 aaKnown RBP12.08□□□□□ -0.48
TSEN54-206ENST00000579449 GALK2Q01415 458 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 MFGE8Q08431 387 aaPredicted RBP12.08□□□□□ -0.48
TSEN54-206ENST00000579449 ECH1Q13011 328 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 ALKBH1Q13686 389 aaKnown RBP12.08□□□□□ -0.48
TSEN54-206ENST00000579449 CDK5R1Q15078 307 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 ZNF829Q3KNS6 432 aaPredicted RBP12.08□□□□□ -0.48
TSEN54-206ENST00000579449 CCDC58Q4VC31 144 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 DMKNQ6E0U4 476 aaPredicted RBP12.08□□□□□ -0.48
TSEN54-206ENST00000579449 MTFR2Q6P444 385 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 FDX2Q6P4F2 183 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 RPL22L1Q6P5R6 122 aaKnown RBP12.08□□□□□ -0.48
TSEN54-206ENST00000579449 ARL9Q6T311 187 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 PHC2Q8IXK0 858 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 ALDH16A1Q8IZ83 802 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 ZNF283Q8N7M2 679 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 OR2G2Q8NGZ5 317 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 RPS4Y2Q8TD47 263 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 HSD17B8Q92506 261 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 ZNF75AQ96N20 296 aa12.08□□□□□ -0.48
TSEN54-206ENST00000579449 TRBV2A0A0J9YWF9 115 aa12.07□□□□□ -0.48
TSEN54-206ENST00000579449 IQCMA0A1B0GVH7 501 aa12.07□□□□□ -0.48
TSEN54-206ENST00000579449 TMEM269A0A1B0GVZ9 245 aa12.07□□□□□ -0.48
TSEN54-206ENST00000579449 F5H5K5 113 aa12.07□□□□□ -0.48
TSEN54-206ENST00000579449 LOC110117498-PIK3R3F6TDL0 507 aa12.07□□□□□ -0.48
TSEN54-206ENST00000579449 PLPP2O43688 288 aa12.07□□□□□ -0.48
TSEN54-206ENST00000579449 AGFG2O95081 481 aa12.07□□□□□ -0.48
TSEN54-206ENST00000579449 COX5BP10606 129 aa12.07□□□□□ -0.48
TSEN54-206ENST00000579449 CD36P16671 472 aa12.07□□□□□ -0.48
TSEN54-206ENST00000579449 APEX1P27695 318 aaKnown RBP12.07□□□□□ -0.48
TSEN54-206ENST00000579449 CCKARP32238 428 aa12.07□□□□□ -0.48
TSEN54-206ENST00000579449 OTX1P32242 354 aaPredicted RBP12.07□□□□□ -0.48
TSEN54-206ENST00000579449 KIR3DL2P43630 455 aa12.07□□□□□ -0.48
TSEN54-206ENST00000579449 PSMA6P60900 246 aaKnown RBP12.07□□□□□ -0.48
TSEN54-206ENST00000579449 PLP2Q04941 152 aa12.07□□□□□ -0.48
TSEN54-206ENST00000579449 SLC3A1Q07837 685 aa12.07□□□□□ -0.48
TSEN54-206ENST00000579449 GPR50Q13585 617 aa12.07□□□□□ -0.48
TSEN54-206ENST00000579449 KRTAP27-1Q3LI81 207 aa12.07□□□□□ -0.48
TSEN54-206ENST00000579449 WDR38Q5JTN6 314 aa12.07□□□□□ -0.48
TSEN54-206ENST00000579449 TIMM23BQ5SRD1 257 aa12.07□□□□□ -0.48
TSEN54-206ENST00000579449 GPR107Q5VW38 600 aa12.07□□□□□ -0.48
TSEN54-206ENST00000579449 CATSPERDQ86XM0 798 aa12.07□□□□□ -0.48
TSEN54-206ENST00000579449 ZNF584Q8IVC4 421 aa12.07□□□□□ -0.48
TSEN54-206ENST00000579449 PRSS35Q8N3Z0 413 aa12.07□□□□□ -0.48
TSEN54-206ENST00000579449 STEAP2Q8NFT2 490 aa12.07□□□□□ -0.48
TSEN54-206ENST00000579449 LILRB4Q8NHJ6 448 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms