RNA–Protein interactions for RNA: ENST00000578954.5

SS18-211, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 756 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-211ENST00000578954 UBE2NP61088 152 aaKnown RBP14.07□□□□□ -0.16
SS18-211ENST00000578954 TPBGQ13641 420 aa14.07□□□□□ -0.16
SS18-211ENST00000578954 TSC22D1Q15714 1073 aa14.07□□□□□ -0.16
SS18-211ENST00000578954 GSG1Q2KHT4 349 aa14.07□□□□□ -0.16
SS18-211ENST00000578954 CCDC58Q4VC31 144 aa14.07□□□□□ -0.16
SS18-211ENST00000578954 PABPC1L2AQ5JQF8 200 aa14.07□□□□□ -0.16
SS18-211ENST00000578954 TIMM23BQ5SRD1 257 aa14.07□□□□□ -0.16
SS18-211ENST00000578954 ZNF774Q6NX45 483 aa14.07□□□□□ -0.16
SS18-211ENST00000578954 P2RY8Q86VZ1 359 aa14.07□□□□□ -0.16
SS18-211ENST00000578954 KLBQ86Z14 1044 aa14.07□□□□□ -0.16
SS18-211ENST00000578954 FAM169BQ8N8A8 192 aa14.07□□□□□ -0.16
SS18-211ENST00000578954 YIPF7Q8N8F6 280 aa14.07□□□□□ -0.16
SS18-211ENST00000578954 STEAP2Q8NFT2 490 aa14.07□□□□□ -0.16
SS18-211ENST00000578954 OR13F1Q8NGS4 319 aa14.07□□□□□ -0.16
SS18-211ENST00000578954 OR1F12Q8NHA8 337 aa14.07□□□□□ -0.16
SS18-211ENST00000578954 CENPMQ9NSP4 180 aa14.07□□□□□ -0.16
SS18-211ENST00000578954 ST6GALNAC2Q9UJ37 374 aa14.07□□□□□ -0.16
SS18-211ENST00000578954 SLC5A6Q9Y289 635 aa14.07□□□□□ -0.16
SS18-211ENST00000578954 AMDHD2Q9Y303 409 aa14.07□□□□□ -0.16
SS18-211ENST00000578954 E9PI62 339 aa14.06□□□□□ -0.16
SS18-211ENST00000578954 OGG1O15527 345 aa14.06□□□□□ -0.16
SS18-211ENST00000578954 CD1AP06126 327 aa14.06□□□□□ -0.16
SS18-211ENST00000578954 PSMB9P28065 219 aa14.06□□□□□ -0.16
SS18-211ENST00000578954 MMP16P51512 607 aa14.06□□□□□ -0.16
SS18-211ENST00000578954 PSMA6P60900 246 aaKnown RBP14.06□□□□□ -0.16
SS18-211ENST00000578954 RAB1AP62820 205 aa14.06□□□□□ -0.16
SS18-211ENST00000578954 FAM27E3Q08E93 113 aa14.06□□□□□ -0.16
SS18-211ENST00000578954 GPR50Q13585 617 aa14.06□□□□□ -0.16
SS18-211ENST00000578954 RAB39AQ14964 217 aa14.06□□□□□ -0.16
SS18-211ENST00000578954 RSPO1Q2MKA7 263 aaPredicted RBP14.06□□□□□ -0.16
SS18-211ENST00000578954 ARMCX4Q5H9R4 360 aa14.06□□□□□ -0.16
SS18-211ENST00000578954 SPATC1Q76KD6 591 aa14.06□□□□□ -0.16
SS18-211ENST00000578954 MDP1Q86V88 176 aa14.06□□□□□ -0.16
SS18-211ENST00000578954 AKR7LQ8NHP1 331 aa14.06□□□□□ -0.16
SS18-211ENST00000578954 KCNJ15Q99712 375 aa14.06□□□□□ -0.16
SS18-211ENST00000578954 RNF121Q9H920 327 aa14.06□□□□□ -0.16
SS18-211ENST00000578954 MOV10Q9HCE1 1003 aaKnown RBP14.06□□□□□ -0.16
SS18-211ENST00000578954 CRNNQ9UBG3 495 aaPredicted RBP14.06□□□□□ -0.16
SS18-211ENST00000578954 FBXL3Q9UKT7 428 aa14.06□□□□□ -0.16
SS18-211ENST00000578954 SLC25A15Q9Y619 301 aa14.06□□□□□ -0.16
SS18-211ENST00000578954 R4GMQ9 66 aa14.06□□□□□ -0.16
SS18-211ENST00000578954 DIDO1Q9BTC0 2240 aaKnown RBP14.06□□□□□ -0.16
SS18-211ENST00000578954 C16orf97H3BN30 126 aa14.05□□□□□ -0.16
SS18-211ENST00000578954 IGKV3-15P01624 115 aa14.05□□□□□ -0.16
SS18-211ENST00000578954 CD79AP11912 226 aa14.05□□□□□ -0.16
SS18-211ENST00000578954 CBR1P16152 277 aa14.05□□□□□ -0.16
SS18-211ENST00000578954 CPEP16870 476 aa14.05□□□□□ -0.16
SS18-211ENST00000578954 HOXC12P31275 282 aa14.05□□□□□ -0.16
SS18-211ENST00000578954 TTKP33981 857 aa14.05□□□□□ -0.16
SS18-211ENST00000578954 UGT2B10P36537 528 aa14.05□□□□□ -0.16
SS18-211ENST00000578954 TUBA1BP68363 451 aa14.05□□□□□ -0.16
SS18-211ENST00000578954 CDK5R1Q15078 307 aa14.05□□□□□ -0.16
SS18-211ENST00000578954 ZNF829Q3KNS6 432 aaPredicted RBP14.05□□□□□ -0.16
SS18-211ENST00000578954 DMKNQ6E0U4 476 aaPredicted RBP14.05□□□□□ -0.16
SS18-211ENST00000578954 RPL22L1Q6P5R6 122 aaKnown RBP14.05□□□□□ -0.16
SS18-211ENST00000578954 TUBA1AQ71U36 451 aa14.05□□□□□ -0.16
SS18-211ENST00000578954 SSX8Q7RTT4 187 aa14.05□□□□□ -0.16
SS18-211ENST00000578954 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.05□□□□□ -0.16
SS18-211ENST00000578954 ZNF584Q8IVC4 421 aa14.05□□□□□ -0.16
SS18-211ENST00000578954 ALDH16A1Q8IZ83 802 aa14.05□□□□□ -0.16
SS18-211ENST00000578954 CPEB3Q8NE35 698 aaKnown RBP14.05□□□□□ -0.16
SS18-211ENST00000578954 S100PBPQ96BU1 408 aa14.05□□□□□ -0.16
SS18-211ENST00000578954 GRIP1Q9Y3R0 1128 aa14.05□□□□□ -0.16
SS18-211ENST00000578954 SIRT4Q9Y6E7 314 aaPredicted RBP14.05□□□□□ -0.16
SS18-211ENST00000578954 ZNF462Q96JM2 2506 aa14.05□□□□□ -0.16
SS18-211ENST00000578954 ACOD1A6NK06 481 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 PLPP2O43688 288 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 IGLV1-44P01699 117 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 APOC1P02654 83 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 SERPINA5P05154 406 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 ZNF14P17017 642 aaPredicted RBP14.04□□□□□ -0.16
SS18-211ENST00000578954 CD53P19397 219 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 TGFBR2P37173 567 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 LIPAP38571 399 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 HTR5AP47898 357 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 CCR9P51686 369 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 GTF2A1P52655 376 aaPredicted RBP14.04□□□□□ -0.16
SS18-211ENST00000578954 TAF13Q15543 124 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 SSX1Q16384 188 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 C3orf36Q3SXR2 165 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 PRSS45Q7RTY3 260 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 PHC2Q8IXK0 858 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 OR2G2Q8NGZ5 317 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 HSD17B8Q92506 261 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 RNASE6Q93091 150 aaKnown RBP14.04□□□□□ -0.16
SS18-211ENST00000578954 SPTSSAQ969W0 71 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 TMIGD2Q96BF3 282 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 SMIM19Q96E16 107 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 YIPF6Q96EC8 236 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 C4orf45Q96LM5 186 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 ACTR6Q9GZN1 396 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 MOB1AQ9H8S9 216 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 G6PC2Q9NQR9 355 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 FAM206AQ9NX38 181 aa14.04□□□□□ -0.16
SS18-211ENST00000578954 RTTNQ86VV8 2226 aa14.03□□□□□ -0.16
SS18-211ENST00000578954 FAM90A27PA6NNH2 459 aa14.03□□□□□ -0.16
SS18-211ENST00000578954 M0R135 149 aa14.03□□□□□ -0.16
SS18-211ENST00000578954 CCRL2O00421 344 aa14.03□□□□□ -0.16
SS18-211ENST00000578954 PNPP00491 289 aa14.03□□□□□ -0.16
SS18-211ENST00000578954 ACSM4P0C7M7 580 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms