RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 SGCDQ92629 289 aa7□□□□□ -1.29
COPS3-215ENST00000578317 MRPL48Q96GC5 212 aaKnown RBP7□□□□□ -1.29
COPS3-215ENST00000578317 RHNO1Q9BSD3 238 aa7□□□□□ -1.29
COPS3-215ENST00000578317 ZNF416Q9BWM5 594 aa7□□□□□ -1.29
COPS3-215ENST00000578317 OPN3Q9H1Y3 402 aaPredicted RBP7□□□□□ -1.29
COPS3-215ENST00000578317 C1orf198Q9H425 327 aa7□□□□□ -1.29
COPS3-215ENST00000578317 ZMAT4Q9H898 229 aa7□□□□□ -1.29
COPS3-215ENST00000578317 OBP2BQ9NPH6 170 aa7□□□□□ -1.29
COPS3-215ENST00000578317 ERVK-18Q9QC07 812 aa7□□□□□ -1.29
COPS3-215ENST00000578317 ERRFI1Q9UJM3 462 aaPredicted RBP7□□□□□ -1.29
COPS3-215ENST00000578317 ERGIC3Q9Y282 383 aa7□□□□□ -1.29
COPS3-215ENST00000578317 CAB39Q9Y376 341 aaPredicted RBP7□□□□□ -1.29
COPS3-215ENST00000578317 TIMM10BQ9Y5J6 103 aa7□□□□□ -1.29
COPS3-215ENST00000578317 LHFPL6Q9Y693 200 aa7□□□□□ -1.29
COPS3-215ENST00000578317 ATP23Q9Y6H3 246 aa7□□□□□ -1.29
COPS3-215ENST00000578317 ARPC4-TTLL3A0A0A6YYG9 625 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 DAPL1A0PJW8 107 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 EIF4E1BA6NMX2 242 aaKnown RBP6.99□□□□□ -1.29
COPS3-215ENST00000578317 ZNF670-ZNF695F2Z2N8 137 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 ZNF254O75437 659 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 APOL3O95236 402 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 RPSAP08865 295 aaKnown RBP6.99□□□□□ -1.29
COPS3-215ENST00000578317 ADRA2AP08913 450 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 MMP7P09237 267 aaPredicted RBP6.99□□□□□ -1.29
COPS3-215ENST00000578317 MYL12AP19105 171 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 DCTDP32321 178 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 NAA10P41227 235 aaPredicted RBP6.99□□□□□ -1.29
COPS3-215ENST00000578317 ADORA2A-AS1P86434 159 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 ZNF85Q03923 595 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 EMX1Q04741 257 aaPredicted RBP6.99□□□□□ -1.29
COPS3-215ENST00000578317 AQP6Q13520 282 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 ODF1Q14990 250 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 MEP1BQ16820 701 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 KCTD18Q6PI47 426 aaPredicted RBP6.99□□□□□ -1.29
COPS3-215ENST00000578317 XKRXQ6PP77 449 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 STAC2Q6ZMT1 411 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 FJX1Q86VR8 437 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 SYS1Q8N2H4 156 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 NANOGP1Q8N7R0 232 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 RELL2Q8NC24 303 aaPredicted RBP6.99□□□□□ -1.29
COPS3-215ENST00000578317 ZNF485Q8NCK3 441 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 OR10H4Q8NGA5 316 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 OR6N2Q8NGY6 317 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 OR2AJ1Q8NGZ0 328 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 OR52N1Q8NH53 320 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 HAVCR2Q8TDQ0 301 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 ST7LQ8TDW4 575 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 RNF133Q8WVZ7 376 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 FBXO17Q96EF6 278 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 CCDC120Q96HB5 630 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 FOXN4Q96NZ1 517 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 ABHD6Q9BV23 337 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 KCNN2Q9H2S1 579 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 MS4A5Q9H3V2 200 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 MOV10Q9HCE1 1003 aaKnown RBP6.99□□□□□ -1.29
COPS3-215ENST00000578317 B3GNT2Q9NY97 397 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 ASH2LQ9UBL3 628 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 CLEC2DQ9UHP7 191 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 LAMP5Q9UJQ1 280 aa6.99□□□□□ -1.29
COPS3-215ENST00000578317 CIB4A0PJX0 185 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 OR5H1A6NKK0 313 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 MRPL3P09001 348 aaKnown RBP6.98□□□□□ -1.29
COPS3-215ENST00000578317 SPARCP09486 303 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 TACSTD2P09758 323 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 B4GALT1P15291 398 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 PCMT1P22061 227 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 ARR3P36575 388 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 CD79BP40259 229 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 ETV1P50549 477 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 HCCSP53701 268 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 CDH15P55291 814 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 ACTA2P62736 377 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 ACTG2P63267 376 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 PIGFQ07326 219 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 ACSM1Q08AH1 577 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 SCRN3Q0VDG4 424 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 ECH1Q13011 328 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 MRPL28Q13084 256 aaKnown RBP6.98□□□□□ -1.29
COPS3-215ENST00000578317 TBCEQ15813 527 aaPredicted RBP6.98□□□□□ -1.29
COPS3-215ENST00000578317 TBRG1Q3YBR2 411 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 SLC36A2Q495M3 483 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 CDONQ4KMG0 1287 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 TIMM23BQ5SRD1 257 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 ZNF322Q6U7Q0 402 aaPredicted RBP6.98□□□□□ -1.29
COPS3-215ENST00000578317 TMPRSS11AQ6ZMR5 421 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 PLEKHG7Q6ZR37 379 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 SLC16A14Q7RTX9 510 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 DCXRQ7Z4W1 244 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 LHFPL3Q86UP9 236 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 CXorf67Q86X51 503 aaPredicted RBP6.98□□□□□ -1.29
COPS3-215ENST00000578317 ZNF679Q8IYX0 411 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 STEAP2Q8NFT2 490 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 SMAP2Q8WU79 429 aaPredicted RBP6.98□□□□□ -1.29
COPS3-215ENST00000578317 THEM6Q8WUY1 208 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 MISP3Q96FF7 219 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 SH3GL3Q99963 347 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 CCDC90BQ9GZT6 254 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 ACOT13Q9NPJ3 140 aa6.98□□□□□ -1.29
COPS3-215ENST00000578317 DDX28Q9NUL7 540 aaKnown RBP6.98□□□□□ -1.29
COPS3-215ENST00000578317 GALNT8Q9NY28 637 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms