RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 PDCD1Q15116 288 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 USF2Q15853 346 aaPredicted RBP12.26□□□□□ -0.45
NDEL1-204ENST00000578172 SLC35D3Q5M8T2 416 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 FAM57BQ71RH2 274 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 ZNF440Q8IYI8 595 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 SLC26A10Q8NG04 563 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 SLC46A1Q96NT5 459 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 TAS2R5Q9NYW4 299 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 ASH2LQ9UBL3 628 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 GMEB2Q9UKD1 530 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 RHBDD3Q9Y3P4 386 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 C2orf16Q68DN1 1984 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 IGKV1D-43A0A0B4J1Z2 117 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 CCDC163A0A0D9SF12 145 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 A0A1B0GUH1 482 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 MCRIP1C9JLW8 97 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 NDUFB6O95139 128 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 PRH1P02810 166 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 OR4E1P0C645 316 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 CCNOP22674 350 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 EPHA4P54764 986 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 TMEM176BQ3YBM2 270 aaPredicted RBP12.26□□□□□ -0.45
NDEL1-204ENST00000578172 IGSF11Q5DX21 431 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 FAM76BQ5HYJ3 339 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 GPR139Q6DWJ6 353 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 TMEM200AQ86VY9 491 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 ANGPTL5Q86XS5 388 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 ZNF679Q8IYX0 411 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 OR52N4Q8NGI2 321 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 OR6C1Q96RD1 312 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 ADAT1Q9BUB4 502 aaKnown RBP12.26□□□□□ -0.45
NDEL1-204ENST00000578172 GLAP06280 429 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 CSF1P09603 554 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 CCINQ13939 588 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 FJX1Q86VR8 437 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 STT3BQ8TCJ2 826 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 SLC39A7Q92504 469 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 HS3ST3A1Q9Y663 406 aa12.26□□□□□ -0.45
NDEL1-204ENST00000578172 FAM221AA4D161 298 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 TLCD2A6NGC4 264 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 KRBOX1C9JBD0 128 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 FADS1O60427 444 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 PRAF2O60831 178 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 HRH1P35367 487 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 HNRNPKP61978 463 aaKnown RBP eCLIP12.25□□□□□ -0.45
NDEL1-204ENST00000578172 BRICD5Q6PL45 260 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 RNF144BQ7Z419 303 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 STPG2Q8N412 459 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 OR4D6Q8NGJ1 314 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 OR8B4Q96RC9 309 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 RBM24Q9BX46 236 aaKnown RBP12.25□□□□□ -0.45
NDEL1-204ENST00000578172 MED19A0JLT2 244 aaPredicted RBP12.25□□□□□ -0.45
NDEL1-204ENST00000578172 XRCC3O43542 346 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 SERPINA2P20848 420 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 EMP2P54851 167 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 FOXF1Q12946 379 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 C9orf135Q5VTT2 229 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 GTPBP8Q8N3Z3 284 aaPredicted RBP12.25□□□□□ -0.45
NDEL1-204ENST00000578172 STOML3Q8TAV4 291 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 VRK1Q99986 396 aaPredicted RBP12.25□□□□□ -0.45
NDEL1-204ENST00000578172 APMAPQ9HDC9 416 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 PRMT8Q9NR22 394 aaPredicted RBP12.25□□□□□ -0.45
NDEL1-204ENST00000578172 POLE3Q9NRF9 147 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 ICAM5Q9UMF0 924 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 ZNF726A6NNF4 738 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 WDPCPO95876 746 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 ZNF41P51814 821 aaPredicted RBP12.25□□□□□ -0.45
NDEL1-204ENST00000578172 EBPQ15125 230 aaKnown RBP12.25□□□□□ -0.45
NDEL1-204ENST00000578172 EXOSC6Q5RKV6 272 aaKnown RBP12.25□□□□□ -0.45
NDEL1-204ENST00000578172 PAPD4Q6PIY7 484 aaKnown RBP12.25□□□□□ -0.45
NDEL1-204ENST00000578172 CDC20BQ86Y33 519 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 OR4K17Q8NGC6 315 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 CD300LFQ8TDQ1 290 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 CCDC107Q8WV48 283 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 DCUN1D4Q92564 292 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 CRB3Q9BUF7 120 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 WWTR1Q9GZV5 400 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 HRH4Q9H3N8 390 aa12.25□□□□□ -0.45
NDEL1-204ENST00000578172 RAB19A4D1S5 217 aa12.24□□□□□ -0.45
NDEL1-204ENST00000578172 NAP1L6A6NFF2 107 aa12.24□□□□□ -0.45
NDEL1-204ENST00000578172 VSTM2BA6NLU5 285 aa12.24□□□□□ -0.45
NDEL1-204ENST00000578172 H7C417 338 aa12.24□□□□□ -0.45
NDEL1-204ENST00000578172 IL33O95760 270 aa12.24□□□□□ -0.45
NDEL1-204ENST00000578172 IGHV3-9P01782 118 aa12.24□□□□□ -0.45
NDEL1-204ENST00000578172 CD53P19397 219 aa12.24□□□□□ -0.45
NDEL1-204ENST00000578172 CDCP2Q5VXM1 449 aa12.24□□□□□ -0.45
NDEL1-204ENST00000578172 TMEM65Q6PI78 240 aa12.24□□□□□ -0.45
NDEL1-204ENST00000578172 MARCH1Q8TCQ1 289 aa12.24□□□□□ -0.45
NDEL1-204ENST00000578172 ROBO4Q8WZ75 1007 aa12.24□□□□□ -0.45
NDEL1-204ENST00000578172 PIGTQ969N2 578 aa12.24□□□□□ -0.45
NDEL1-204ENST00000578172 S100PBPQ96BU1 408 aa12.24□□□□□ -0.45
NDEL1-204ENST00000578172 SCARF2Q96GP6 870 aaPredicted RBP12.24□□□□□ -0.45
NDEL1-204ENST00000578172 HEXA-AS1Q9H8Q6 139 aa12.24□□□□□ -0.45
NDEL1-204ENST00000578172 MRPL22Q9NWU5 206 aaKnown RBP12.24□□□□□ -0.45
NDEL1-204ENST00000578172 MTFP1Q9UDX5 166 aa12.24□□□□□ -0.45
NDEL1-204ENST00000578172 RER1O15258 196 aa12.24□□□□□ -0.45
NDEL1-204ENST00000578172 DUX1O43812 170 aa12.24□□□□□ -0.45
NDEL1-204ENST00000578172 GABRR1P24046 479 aa12.24□□□□□ -0.45
NDEL1-204ENST00000578172 FUT7Q11130 342 aa12.24□□□□□ -0.45
NDEL1-204ENST00000578172 UQCC2Q9BRT2 126 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms