RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 CDRT1O95170 752 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 GOSR1O95249 250 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 LALBAP00709 142 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 PGA4P0DJD7 388 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 PGA3P0DJD8 388 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 ALOX5APP20292 161 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 MYL9P24844 172 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 LAP3P28838 519 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 GDI2P50395 445 aaKnown RBP8.94□□□□□ -0.98
SS18-207ENST00000577636 ZNF84P51523 738 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 P2RY4P51582 365 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 GFRA1P56159 465 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 CLDN15P56746 228 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 CAMK2DQ13557 499 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 DCTN2Q13561 401 aaKnown RBP8.94□□□□□ -0.98
SS18-207ENST00000577636 EIF2B1Q14232 305 aaKnown RBP8.94□□□□□ -0.98
SS18-207ENST00000577636 ZNF846Q147U1 533 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 CDK5R1Q15078 307 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 BCL2A1Q16548 175 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 TEX30Q5JUR7 227 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 CARD17Q5XLA6 110 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 CD200R1LQ6Q8B3 271 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 CREB3L2Q70SY1 520 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.94□□□□□ -0.98
SS18-207ENST00000577636 OR2AJ1Q8NGZ0 328 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 OR10D3Q8NH80 312 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 TBC1D15Q8TC07 691 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 NSMAFQ92636 917 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 THRSPQ92748 146 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 GHSRQ92847 366 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 PIGTQ969N2 578 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 SMIM19Q96E16 107 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 PELI1Q96FA3 418 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 PIK3IP1Q96FE7 263 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 CCL19Q99731 98 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 TM9SF2Q99805 663 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 MED18Q9BUE0 208 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 HDHD5Q9BXW7 423 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 PRRG4Q9BZD6 226 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 WDR12Q9GZL7 423 aaKnown RBP8.94□□□□□ -0.98
SS18-207ENST00000577636 C6orf62Q9GZU0 229 aaPredicted RBP8.94□□□□□ -0.98
SS18-207ENST00000577636 PRDM14Q9GZV8 571 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 COMMD4Q9H0A8 199 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 SEC61A2Q9H9S3 476 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 CALHM2Q9HA72 323 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 PLGRKTQ9HBL7 147 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 SNTG1Q9NSN8 517 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 ACOXLQ9NUZ1 547 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 EMC3Q9P0I2 261 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 KLHL13Q9P2N7 655 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 MCTS1Q9ULC4 181 aaKnown RBP8.94□□□□□ -0.98
SS18-207ENST00000577636 COPS3Q9UNS2 423 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 RCE1Q9Y256 329 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 PEX16Q9Y5Y5 336 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 MBD3L4A6NDZ8 208 aaPredicted RBP8.93□□□□□ -0.98
SS18-207ENST00000577636 MBD3L3A6NE82 208 aaPredicted RBP8.93□□□□□ -0.98
SS18-207ENST00000577636 MBD3L5A6NJ08 208 aaPredicted RBP8.93□□□□□ -0.98
SS18-207ENST00000577636 ZNF879B4DU55 563 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 GPR171O14626 319 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 SMAD9O15198 467 aaKnown RBP8.93□□□□□ -0.98
SS18-207ENST00000577636 OGG1O15527 345 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 SLC43A1O75387 559 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 ZNF254O75437 659 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 GATBO75879 557 aaKnown RBP8.93□□□□□ -0.98
SS18-207ENST00000577636 IL18BPO95998 194 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 OR8G3PP0DMU2 310 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 GAAP10253 952 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 CD8BP10966 210 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 CFL1P23528 166 aaKnown RBP8.93□□□□□ -0.98
SS18-207ENST00000577636 MAPK3P27361 379 aaPredicted RBP8.93□□□□□ -0.98
SS18-207ENST00000577636 RIDAP52758 137 aaKnown RBP8.93□□□□□ -0.98
SS18-207ENST00000577636 CLDN20P56880 219 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 FABP5Q01469 135 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 FMODQ06828 376 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 RASGEF1BQ0VAM2 473 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 DBPQ10586 325 aaPredicted RBP8.93□□□□□ -0.98
SS18-207ENST00000577636 SLC17A1Q14916 467 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 DMKNQ6E0U4 476 aaPredicted RBP8.93□□□□□ -0.98
SS18-207ENST00000577636 LYPD4Q6UWN0 246 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 FCRLAQ7L513 359 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 SSX6Q7RTT6 188 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 CEACAM19Q7Z692 300 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 GGNQ86UU5 652 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 CROCCP3Q8IVE0 287 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 GCNT2Q8N0V5 402 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 LRRC75A-AS1Q8N1F1 130 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 SLC26A10Q8NG04 563 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 MBD3L2Q8NHZ7 208 aaPredicted RBP8.93□□□□□ -0.98
SS18-207ENST00000577636 ABHD4Q8TB40 342 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 PHYHIPQ92561 330 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 BORCS5Q969J3 196 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 CEP19Q96LK0 163 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 MRPL13Q9BYD1 178 aaKnown RBP8.93□□□□□ -0.98
SS18-207ENST00000577636 PARPBPQ9NWS1 579 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 GLTPQ9NZD2 209 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 JKAMPQ9P055 326 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 SF3B6Q9Y3B4 125 aaKnown RBP8.93□□□□□ -0.98
SS18-207ENST00000577636 NCKAP5O14513 1909 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 FBN3Q75N90 2809 aa8.93□□□□□ -0.98
SS18-207ENST00000577636 JMJD1CQ15652 2540 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms