RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 TSPAN32Q96QS1 320 aa12.36□□□□□ -0.43
RNF43-202ENST00000577625 BARX1Q9HBU1 254 aaPredicted RBP12.36□□□□□ -0.43
RNF43-202ENST00000577625 TAS2R5Q9NYW4 299 aa12.36□□□□□ -0.43
RNF43-202ENST00000577625 RASD1Q9Y272 281 aa12.36□□□□□ -0.43
RNF43-202ENST00000577625 VDAC3Q9Y277 283 aa12.36□□□□□ -0.43
RNF43-202ENST00000577625 FARSAQ9Y285 508 aaKnown RBP12.36□□□□□ -0.43
RNF43-202ENST00000577625 FREM3P0C091 2139 aa12.36□□□□□ -0.43
RNF43-202ENST00000577625 TRBV23-1A0A0A0MS06 115 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 TTLL8A6PVC2 850 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 GSTZ1O43708 216 aaPredicted RBP12.35□□□□□ -0.43
RNF43-202ENST00000577625 GATBO75879 557 aaKnown RBP12.35□□□□□ -0.43
RNF43-202ENST00000577625 GLCEO94923 617 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 PSMB1P20618 241 aaKnown RBP12.35□□□□□ -0.43
RNF43-202ENST00000577625 APOBEC1P41238 236 aaKnown RBP12.35□□□□□ -0.43
RNF43-202ENST00000577625 FOXF1Q12946 379 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 ECH1Q13011 328 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 TRIP6Q15654 476 aaKnown RBP12.35□□□□□ -0.43
RNF43-202ENST00000577625 INPP5JQ15735 1006 aaPredicted RBP12.35□□□□□ -0.43
RNF43-202ENST00000577625 SGCAQ16586 387 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 TMEM255AQ5JRV8 349 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 OPN5Q6U736 354 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 GLDNQ6ZMI3 551 aaPredicted RBP12.35□□□□□ -0.43
RNF43-202ENST00000577625 CBLN2Q8IUK8 224 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 EXD3Q8N9H8 876 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 PNPLA2Q96AD5 504 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 SEBOXQ9HB31 216 aaPredicted RBP12.35□□□□□ -0.43
RNF43-202ENST00000577625 ZFP57Q9NU63 452 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 ZMIZ1Q9ULJ6 1067 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 RIF1Q5UIP0 2472 aaKnown RBP12.35□□□□□ -0.43
RNF43-202ENST00000577625 TP53I11O14683 189 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 DXOO77932 396 aaKnown RBP12.35□□□□□ -0.43
RNF43-202ENST00000577625 TCF15Q12870 199 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 SSPNQ14714 243 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 PLPPR5Q32ZL2 321 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 MESTQ5EB52 335 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 LINC01590Q5TEZ4 76 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 BAIAP2L2Q6UXY1 529 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 RBMS3Q6XE24 437 aaKnown RBP12.35□□□□□ -0.43
RNF43-202ENST00000577625 SERPINA12Q8IW75 414 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 TRMT10AQ8TBZ6 339 aaKnown RBP12.35□□□□□ -0.43
RNF43-202ENST00000577625 SMAP2Q8WU79 429 aaPredicted RBP12.35□□□□□ -0.43
RNF43-202ENST00000577625 SLC25A36Q96CQ1 311 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 C4orf36Q96KX1 117 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 PIGMQ9H3S5 423 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 RASL12Q9NYN1 266 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 FLVCR2Q9UPI3 526 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 MOKQ9UQ07 419 aa12.35□□□□□ -0.43
RNF43-202ENST00000577625 ZNF729A6NN14 1252 aaPredicted RBP12.34□□□□□ -0.43
RNF43-202ENST00000577625 FTCDNL1E5RQL4 147 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 UBE2CO00762 179 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 ZNF208O43345 1280 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 CREBL2O60519 120 aaPredicted RBP12.34□□□□□ -0.43
RNF43-202ENST00000577625 CD53P19397 219 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 SDHBP21912 280 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 GRPRP30550 384 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 SSR4P51571 173 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 CAPZA1P52907 286 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 MLF1P58340 268 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 TAS2R43P59537 309 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 RAB5BP61020 215 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 SNRPEP62304 92 aaKnown RBP12.34□□□□□ -0.43
RNF43-202ENST00000577625 Q0VFX4 171 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 RNF212Q495C1 297 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 RNASE12Q5GAN4 147 aaKnown RBP12.34□□□□□ -0.43
RNF43-202ENST00000577625 SLC25A53Q5H9E4 307 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 ELFN2Q5R3F8 820 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 TMEM164Q5U3C3 297 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 PRAMEF20Q5VT98 475 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 SFXN4Q6P4A7 337 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 SSX6Q7RTT6 188 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 RPS19BP1Q86WX3 136 aaKnown RBP12.34□□□□□ -0.43
RNF43-202ENST00000577625 SLC35F2Q8IXU6 374 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 OR2M3Q8NG83 312 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 OR6K6Q8NGW6 343 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 HAVCR2Q8TDQ0 301 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 RELTQ969Z4 430 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 GAL3ST1Q99999 423 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 ALG12Q9BV10 488 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 GPN1Q9HCN4 374 aaPredicted RBP12.34□□□□□ -0.43
RNF43-202ENST00000577625 NCDNQ9UBB6 729 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 ZNF69Q9UC07 566 aa12.34□□□□□ -0.43
RNF43-202ENST00000577625 ZNF346Q9UL40 294 aaKnown RBP12.34□□□□□ -0.43
RNF43-202ENST00000577625 SIRT4Q9Y6E7 314 aaPredicted RBP12.34□□□□□ -0.43
RNF43-202ENST00000577625 SNRPGP15A8MWD9 76 aa12.33□□□□□ -0.44
RNF43-202ENST00000577625 SHISA8B8ZZ34 492 aa12.33□□□□□ -0.44
RNF43-202ENST00000577625 CTDSPLO15194 276 aa12.33□□□□□ -0.44
RNF43-202ENST00000577625 RNF13O43567 381 aa12.33□□□□□ -0.44
RNF43-202ENST00000577625 LRP3O75074 770 aa12.33□□□□□ -0.44
RNF43-202ENST00000577625 SPDEFO95238 335 aa12.33□□□□□ -0.44
RNF43-202ENST00000577625 HEXAP06865 529 aa12.33□□□□□ -0.44
RNF43-202ENST00000577625 UBBP0CG47 229 aa12.33□□□□□ -0.44
RNF43-202ENST00000577625 UBCP0CG48 685 aaKnown RBP12.33□□□□□ -0.44
RNF43-202ENST00000577625 CNR1P21554 472 aa12.33□□□□□ -0.44
RNF43-202ENST00000577625 NAA10P41227 235 aaPredicted RBP12.33□□□□□ -0.44
RNF43-202ENST00000577625 ZNF41P51814 821 aaPredicted RBP12.33□□□□□ -0.44
RNF43-202ENST00000577625 ACTA2P62736 377 aa12.33□□□□□ -0.44
RNF43-202ENST00000577625 RPS15P62841 145 aaKnown RBP12.33□□□□□ -0.44
RNF43-202ENST00000577625 RPS27AP62979 156 aaKnown RBP12.33□□□□□ -0.44
RNF43-202ENST00000577625 UBA52P62987 128 aaKnown RBP12.33□□□□□ -0.44
RNF43-202ENST00000577625 ACTG2P63267 376 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms