RNA–Protein interactions for RNA: ENST00000577498.1

IFT20-204, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-204ENST00000577498 SKA3Q8IX90 412 aa13.28□□□□□ -0.28
IFT20-204ENST00000577498 ELMOD2Q8IZ81 293 aa13.28□□□□□ -0.28
IFT20-204ENST00000577498 OR13C5Q8NGS8 318 aa13.28□□□□□ -0.28
IFT20-204ENST00000577498 MCFD2Q8NI22 146 aa13.28□□□□□ -0.28
IFT20-204ENST00000577498 TBC1D15Q8TC07 691 aa13.28□□□□□ -0.28
IFT20-204ENST00000577498 C12orf49Q9H741 205 aa13.28□□□□□ -0.28
IFT20-204ENST00000577498 SNTG1Q9NSN8 517 aa13.28□□□□□ -0.28
IFT20-204ENST00000577498 NUFIP1Q9UHK0 495 aaKnown RBP13.28□□□□□ -0.28
IFT20-204ENST00000577498 PRSS50Q9UI38 385 aa13.28□□□□□ -0.28
IFT20-204ENST00000577498 ATPIF1Q9UII2 106 aa13.28□□□□□ -0.28
IFT20-204ENST00000577498 GTF2A1LQ9UNN4 478 aa13.28□□□□□ -0.28
IFT20-204ENST00000577498 SLC22A13Q9Y226 551 aa13.28□□□□□ -0.28
IFT20-204ENST00000577498 IGF2RP11717 2491 aa13.28□□□□□ -0.28
IFT20-204ENST00000577498 TRBV5-7A0A0A0MS05 114 aa13.27□□□□□ -0.29
IFT20-204ENST00000577498 CASKO14936 926 aa13.27□□□□□ -0.29
IFT20-204ENST00000577498 ZNHIT1O43257 154 aa13.27□□□□□ -0.29
IFT20-204ENST00000577498 SYNGR3O43761 229 aa13.27□□□□□ -0.29
IFT20-204ENST00000577498 RAF1P04049 648 aa13.27□□□□□ -0.29
IFT20-204ENST00000577498 ABOP16442 354 aa13.27□□□□□ -0.29
IFT20-204ENST00000577498 ZNF32P17041 273 aa13.27□□□□□ -0.29
IFT20-204ENST00000577498 CALRP27797 417 aaKnown RBP13.27□□□□□ -0.29
IFT20-204ENST00000577498 HOXD11P31277 338 aaPredicted RBP13.27□□□□□ -0.29
IFT20-204ENST00000577498 OTX1P32242 354 aaPredicted RBP13.27□□□□□ -0.29
IFT20-204ENST00000577498 TIMP3P35625 211 aa13.27□□□□□ -0.29
IFT20-204ENST00000577498 KIR2DL2P43627 348 aaPredicted RBP13.27□□□□□ -0.29
IFT20-204ENST00000577498 CX3CR1P49238 355 aa13.27□□□□□ -0.29
IFT20-204ENST00000577498 FAPQ12884 760 aa13.27□□□□□ -0.29
IFT20-204ENST00000577498 SLC36A2Q495M3 483 aa13.27□□□□□ -0.29
IFT20-204ENST00000577498 HSD17B12Q53GQ0 312 aa13.27□□□□□ -0.29
IFT20-204ENST00000577498 RTL6Q6ICC9 239 aa13.27□□□□□ -0.29
IFT20-204ENST00000577498 ANKRD16Q6P6B7 361 aa13.27□□□□□ -0.29
IFT20-204ENST00000577498 CD163Q86VB7 1156 aa13.27□□□□□ -0.29
IFT20-204ENST00000577498 CROCCP3Q8IVE0 287 aa13.27□□□□□ -0.29
IFT20-204ENST00000577498 SPTSSAQ969W0 71 aa13.27□□□□□ -0.29
IFT20-204ENST00000577498 DERL3Q96Q80 235 aa13.27□□□□□ -0.29
IFT20-204ENST00000577498 OR14A2Q96R54 314 aa13.27□□□□□ -0.29
IFT20-204ENST00000577498 OR2H1Q9GZK4 316 aa13.27□□□□□ -0.29
IFT20-204ENST00000577498 PBOV1Q9GZY1 135 aa13.27□□□□□ -0.29
IFT20-204ENST00000577498 PPIL3Q9H2H8 161 aaKnown RBP13.27□□□□□ -0.29
IFT20-204ENST00000577498 PLEK2Q9NYT0 353 aa13.27□□□□□ -0.29
IFT20-204ENST00000577498 NCOA6Q14686 2063 aaPredicted RBP13.27□□□□□ -0.29
IFT20-204ENST00000577498 MED12LQ86YW9 2145 aa13.27□□□□□ -0.29
IFT20-204ENST00000577498 IQCMA0A1B0GVH7 501 aa13.26□□□□□ -0.29
IFT20-204ENST00000577498 OR6C6A6NF89 314 aa13.26□□□□□ -0.29
IFT20-204ENST00000577498 DVL2O14641 736 aa13.26□□□□□ -0.29
IFT20-204ENST00000577498 DOK2O60496 412 aa13.26□□□□□ -0.29
IFT20-204ENST00000577498 MMP7P09237 267 aaPredicted RBP13.26□□□□□ -0.29
IFT20-204ENST00000577498 OCM2P0CE71 109 aa13.26□□□□□ -0.29
IFT20-204ENST00000577498 CFL1P23528 166 aaKnown RBP13.26□□□□□ -0.29
IFT20-204ENST00000577498 TGFBR3Q03167 851 aa13.26□□□□□ -0.29
IFT20-204ENST00000577498 MXD1Q05195 221 aa13.26□□□□□ -0.29
IFT20-204ENST00000577498 MOGQ16653 247 aa13.26□□□□□ -0.29
IFT20-204ENST00000577498 KRTAP27-1Q3LI81 207 aa13.26□□□□□ -0.29
IFT20-204ENST00000577498 ZFHX4Q86UP3 3567 aa13.26□□□□□ -0.29
IFT20-204ENST00000577498 GCNT2Q8N0V5 402 aa13.26□□□□□ -0.29
IFT20-204ENST00000577498 ZNF283Q8N7M2 679 aa13.26□□□□□ -0.29
IFT20-204ENST00000577498 OR1F12Q8NHA8 337 aa13.26□□□□□ -0.29
IFT20-204ENST00000577498 SNRNP40Q96DI7 357 aaKnown RBP13.26□□□□□ -0.29
IFT20-204ENST00000577498 BARHL1Q9BZE3 327 aa13.26□□□□□ -0.29
IFT20-204ENST00000577498 SLC25A18Q9H1K4 315 aa13.26□□□□□ -0.29
IFT20-204ENST00000577498 TP63Q9H3D4 680 aaPredicted RBP13.26□□□□□ -0.29
IFT20-204ENST00000577498 NOX4Q9NPH5 578 aa13.26□□□□□ -0.29
IFT20-204ENST00000577498 PLSCR4Q9NRQ2 329 aa13.26□□□□□ -0.29
IFT20-204ENST00000577498 CRNNQ9UBG3 495 aaPredicted RBP13.26□□□□□ -0.29
IFT20-204ENST00000577498 HHLA2Q9UM44 414 aa13.26□□□□□ -0.29
IFT20-204ENST00000577498 SLC5A6Q9Y289 635 aa13.26□□□□□ -0.29
IFT20-204ENST00000577498 FAM215AQ9Y5M1 114 aa13.26□□□□□ -0.29
IFT20-204ENST00000577498 NCOR2Q9Y618 2525 aa13.26□□□□□ -0.29
IFT20-204ENST00000577498 SHISA3A0PJX4 238 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 PRRG2O14669 202 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 PDCD5O14737 125 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 ITGA5P08648 1049 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 CLEC2LP0C7M8 214 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 COX5BP10606 129 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 CRYGSP22914 178 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 ARR3P36575 388 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 PRKXP51817 358 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 TPTEP56180 551 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 PER3P56645 1201 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 ZNF121P58317 390 aaPredicted RBP13.25□□□□□ -0.29
IFT20-204ENST00000577498 PSG4Q00888 419 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 HNRNPA0Q13151 305 aaKnown RBP13.25□□□□□ -0.29
IFT20-204ENST00000577498 FAM27D1Q5T7N8 215 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 TMEM53Q6P2H8 277 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 DRAM2Q6UX65 266 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 GFRALQ6UXV0 394 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 Q6ZT83 130 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 SEM1Q6ZVN7 128 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 CCDC36Q8IYA8 594 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 CNEP1R1Q8N9A8 125 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 OR6Q1Q8NGQ2 317 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 OR1K1Q8NGR3 316 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 TSEN15Q8WW01 171 aaKnown RBP13.25□□□□□ -0.29
IFT20-204ENST00000577498 NANOS1Q8WY41 292 aaKnown RBP13.25□□□□□ -0.29
IFT20-204ENST00000577498 AP3S1Q92572 193 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 BCL2L2Q92843 193 aaPredicted RBP13.25□□□□□ -0.29
IFT20-204ENST00000577498 BOD1Q96IK1 185 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 WNT5BQ9H1J7 359 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 TPK1Q9H3S4 243 aa13.25□□□□□ -0.29
IFT20-204ENST00000577498 SP140LQ9H930 580 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms