RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 MT-ND4LP03901 98 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 KLK3P07288 261 aaPredicted RBP11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 RAB11AP62491 216 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 CLEC9AQ6UXN8 241 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 RBMS3Q6XE24 437 aaKnown RBP11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 CLEC1AQ8NC01 280 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 OR5M8Q8NGP6 311 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 SLC46A1Q96NT5 459 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 MED9Q9NWA0 146 aa11.91□□□□□ -0.5
PCDHGB3-201ENST00000576222 CKAP5Q14008 2032 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 WNT11O96014 354 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 HOXC12P31275 282 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 RIN1Q13671 783 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 HAGHQ16775 308 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 ZDHHC22Q8N966 263 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 AP1S3Q96PC3 154 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 FGF22Q9HCT0 170 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 C19orf12Q9NSK7 152 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 UQCC1Q9NVA1 299 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 OR6C68A6NDL8 312 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 HPNP05981 417 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 RFC3P40938 356 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 SCAND1P57086 179 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 ASTLQ6HA08 431 aaPredicted RBP11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 SECTM1Q8WVN6 248 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 SLC6A18Q96N87 628 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 USB1Q9BQ65 265 aaKnown RBP11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 HAO2Q9NYQ3 351 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 ACAD8Q9UKU7 415 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 SIRT4Q9Y6E7 314 aaPredicted RBP11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 ARPC3O15145 178 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 DUX1O43812 170 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 GJA4P35212 333 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 OR52W1Q6IF63 320 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 CD200R1LQ6Q8B3 271 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 FGF13Q92913 245 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 ZNF681Q96N22 645 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 NKX3-1Q99801 234 aaPredicted RBP11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 ALKBH4Q9NXW9 302 aa11.9□□□□□ -0.5
PCDHGB3-201ENST00000576222 SPAG17Q6Q759 2223 aa11.9□□□□□ -0.51
PCDHGB3-201ENST00000576222 DSPPQ9NZW4 1301 aa11.9□□□□□ -0.51
PCDHGB3-201ENST00000576222 OR6C6A6NF89 314 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 ZFP92A6NM28 416 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 GALR3O60755 368 aaPredicted RBP11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 ZNF705AQ6ZN79 300 aaPredicted RBP11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 SHISA6Q6ZSJ9 500 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 BCORP1Q8N888 145 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 FAM3CQ92520 227 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 FKRPQ9H9S5 495 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 TBC1D29Q9UFV1 150 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 PADI1Q9ULC6 663 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 E5RGE8 158 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 YKT6O15498 198 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 SERPINA7P05543 415 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 JMJD7P0C870 316 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 POU3F2P20265 443 aaPredicted RBP11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 LIMS1P48059 325 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 GABREP78334 506 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 ADIRFQ15847 76 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 C19orf47Q8N9M1 422 aaKnown RBP11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 ASH2LQ9UBL3 628 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 AK3Q9UIJ7 227 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 NXT1Q9UKK6 140 aaKnown RBP11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 NSG2Q9Y328 171 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 BHLHE40O14503 412 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 CRYBA1P05813 215 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 SMIM6P0DI80 62 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 AGFG1P52594 562 aaKnown RBP11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 PLXDC1Q8IUK5 500 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 DTWD2Q8NBA8 298 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 OR5AP2Q8NGF4 316 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 HPSE2Q8WWQ2 592 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 SEH1LQ96EE3 360 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 ZNF2Q9BSG1 426 aaPredicted RBP11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 CREBZFQ9NS37 354 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 SLC39A9Q9NUM3 307 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 A0A1B0GTH9 108 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 OR5K3A6NET4 321 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 ANKRD34CP0C6C1 535 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 DVL1P1P54792 670 aaPredicted RBP11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 INPP5JQ15735 1006 aaPredicted RBP11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 TAF9Q16594 264 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 GUK1Q16774 197 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 PHF19Q5T6S3 580 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 CORO6Q6QEF8 472 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 NPSR1Q6W5P4 371 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 DPPA2Q7Z7J5 298 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 WDR5BQ86VZ2 330 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 PIGQQ9BRB3 760 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 SF3B6Q9Y3B4 125 aaKnown RBP11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 FLVCR1Q9Y5Y0 555 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 R4GMQ9 66 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 MIA3Q5JRA6 1907 aa11.89□□□□□ -0.51
PCDHGB3-201ENST00000576222 A0A087WUJ7 227 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 PRSS37A4D1T9 235 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 PRRT4C9JH25 899 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 DUSP1P28562 367 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 FASLGP48023 281 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 PPIAP62937 165 aaKnown RBP11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 VWA2Q5GFL6 755 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms