RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 CST1P01037 141 aa2.04□□□□□ -2.08
CDC27-216ENST00000574304 GGT1P19440 569 aa2.04□□□□□ -2.08
CDC27-216ENST00000574304 FOXN2P32314 431 aa2.04□□□□□ -2.08
CDC27-216ENST00000574304 BST1Q10588 318 aa2.04□□□□□ -2.08
CDC27-216ENST00000574304 ANKDD1AQ495B1 522 aa2.04□□□□□ -2.08
CDC27-216ENST00000574304 GPR107Q5VW38 600 aa2.04□□□□□ -2.08
CDC27-216ENST00000574304 CENPPQ6IPU0 288 aa2.04□□□□□ -2.08
CDC27-216ENST00000574304 TMEM150AQ86TG1 271 aa2.04□□□□□ -2.08
CDC27-216ENST00000574304 NBPF5PQ86XG9 351 aaPredicted RBP2.04□□□□□ -2.08
CDC27-216ENST00000574304 PRELID2Q8N945 189 aa2.04□□□□□ -2.08
CDC27-216ENST00000574304 KLF14Q8TD94 323 aaPredicted RBP2.04□□□□□ -2.08
CDC27-216ENST00000574304 IP6K3Q96PC2 410 aa2.04□□□□□ -2.08
CDC27-216ENST00000574304 SAMSN1Q9NSI8 373 aaKnown RBP2.04□□□□□ -2.08
CDC27-216ENST00000574304 PSMC3IPQ9P2W1 217 aaPredicted RBP2.04□□□□□ -2.08
CDC27-216ENST00000574304 KRBOX1C9JBD0 128 aa2.03□□□□□ -2.08
CDC27-216ENST00000574304 RAB29O14966 203 aa2.03□□□□□ -2.08
CDC27-216ENST00000574304 NVLO15381 856 aaKnown RBP2.03□□□□□ -2.08
CDC27-216ENST00000574304 TSPAN13O95857 204 aa2.03□□□□□ -2.08
CDC27-216ENST00000574304 CYB5R3P00387 301 aaPredicted RBP2.03□□□□□ -2.08
CDC27-216ENST00000574304 CD37P11049 281 aa2.03□□□□□ -2.08
CDC27-216ENST00000574304 CHMLP26374 656 aa2.03□□□□□ -2.08
CDC27-216ENST00000574304 TMED10P49755 219 aaKnown RBP2.03□□□□□ -2.08
CDC27-216ENST00000574304 GFERP55789 205 aa2.03□□□□□ -2.08
CDC27-216ENST00000574304 PRR3P79522 188 aaKnown RBP2.03□□□□□ -2.08
CDC27-216ENST00000574304 GUSBP11Q6P575 273 aa2.03□□□□□ -2.08
CDC27-216ENST00000574304 NKAIN4Q8IVV8 208 aa2.03□□□□□ -2.08
CDC27-216ENST00000574304 UBE2J2Q8N2K1 259 aa2.03□□□□□ -2.08
CDC27-216ENST00000574304 NPWQ8N729 165 aa2.03□□□□□ -2.08
CDC27-216ENST00000574304 ZNF680Q8NEM1 530 aa2.03□□□□□ -2.08
CDC27-216ENST00000574304 TMEM230Q96A57 120 aa2.03□□□□□ -2.08
CDC27-216ENST00000574304 SLC29A1Q99808 456 aa2.03□□□□□ -2.08
CDC27-216ENST00000574304 SHANK2-AS3Q9BTD1 123 aa2.03□□□□□ -2.08
CDC27-216ENST00000574304 SIGLEC7Q9Y286 467 aa2.03□□□□□ -2.08
CDC27-216ENST00000574304 CSDC2Q9Y534 153 aaKnown RBP2.03□□□□□ -2.08
CDC27-216ENST00000574304 SDK2Q58EX2 2172 aa2.03□□□□□ -2.08
CDC27-216ENST00000574304 LTBP4Q8N2S1 1624 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 IGHV3-72A0A0B4J1Y9 119 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 A0A1W2PNN7 141 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 GABRR3A8MPY1 467 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 CXCL11O14625 94 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 FKBP6O75344 327 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 IGHV3-11P01762 117 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 ACSM4P0C7M7 580 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 LGALS3P17931 250 aaKnown RBP2.02□□□□□ -2.09
CDC27-216ENST00000574304 NCF2P19878 526 aaPredicted RBP2.02□□□□□ -2.09
CDC27-216ENST00000574304 NAA10P41227 235 aaPredicted RBP2.02□□□□□ -2.09
CDC27-216ENST00000574304 PRLHRP49683 370 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 CDH6P55285 790 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 RPL23P62829 140 aaKnown RBP2.02□□□□□ -2.09
CDC27-216ENST00000574304 TGM3Q08188 693 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 ZMYND11Q15326 602 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 TEX30Q5JUR7 227 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 PRAMEF5Q5TYX0 476 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 UBE2UQ5VVX9 321 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 PRAMEF6Q5VXH4 476 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 CASC1Q6TDU7 716 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 SASS6Q6UVJ0 657 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 RGS9BPQ6ZS82 235 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 ZNF101Q8IZC7 436 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 ZNF664Q8N3J9 261 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 SLC35G3Q8N808 338 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 CHST4Q8NCG5 386 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 OR11H7Q8NGC8 314 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 NT5C3BQ969T7 300 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 WDR34Q96EX3 536 aa2.02□□□□□ -2.09
CDC27-216ENST00000574304 ZSCAN16Q9H4T2 348 aaPredicted RBP2.02□□□□□ -2.09
CDC27-216ENST00000574304 AKNAQ7Z591 1439 aa2.01□□□□□ -2.09
CDC27-216ENST00000574304 USP47Q96K76 1375 aa2.01□□□□□ -2.09
CDC27-216ENST00000574304 IGKV1-8A0A0C4DH67 115 aa2.01□□□□□ -2.09
CDC27-216ENST00000574304 OR5H1A6NKK0 313 aa2.01□□□□□ -2.09
CDC27-216ENST00000574304 H7C417 338 aa2.01□□□□□ -2.09
CDC27-216ENST00000574304 CDC40O60508 579 aaKnown RBP eCLIP2.01□□□□□ -2.09
CDC27-216ENST00000574304 EIF4E2O60573 245 aaKnown RBP2.01□□□□□ -2.09
CDC27-216ENST00000574304 EIF1BO60739 113 aaKnown RBP2.01□□□□□ -2.09
CDC27-216ENST00000574304 GLSO94925 669 aaPredicted RBP2.01□□□□□ -2.09
CDC27-216ENST00000574304 NDUFB10O96000 172 aa2.01□□□□□ -2.09
CDC27-216ENST00000574304 PAHP00439 452 aa2.01□□□□□ -2.09
CDC27-216ENST00000574304 ATF6P18850 670 aa2.01□□□□□ -2.09
CDC27-216ENST00000574304 TNNI1P19237 187 aa2.01□□□□□ -2.09
CDC27-216ENST00000574304 U2AF2P26368 475 aaKnown RBP eCLIP2.01□□□□□ -2.091e-6■■■■□ 21.8
CDC27-216ENST00000574304 PSMB5P28074 263 aa2.01□□□□□ -2.09
CDC27-216ENST00000574304 EIF1P41567 113 aaKnown RBP2.01□□□□□ -2.09
CDC27-216ENST00000574304 PRKCDQ05655 676 aa2.01□□□□□ -2.09
CDC27-216ENST00000574304 YIF1BQ5BJH7 314 aa2.01□□□□□ -2.09
CDC27-216ENST00000574304 H3F3CQ6NXT2 135 aa2.01□□□□□ -2.09
CDC27-216ENST00000574304 CERS6Q6ZMG9 384 aa2.01□□□□□ -2.09
CDC27-216ENST00000574304 MBOAT1Q6ZNC8 495 aa2.01□□□□□ -2.09
CDC27-216ENST00000574304 C11orf72Q8NBR9 251 aa2.01□□□□□ -2.09
CDC27-216ENST00000574304 RHOXF2Q9BQY4 288 aa2.01□□□□□ -2.09
CDC27-216ENST00000574304 GCOM2Q9BZD3 368 aaPredicted RBP2.01□□□□□ -2.09
CDC27-216ENST00000574304 ILKAPQ9H0C8 392 aaPredicted RBP2.01□□□□□ -2.09
CDC27-216ENST00000574304 SLC2A8Q9NY64 477 aa2.01□□□□□ -2.09
CDC27-216ENST00000574304 UXTQ9UBK9 157 aaPredicted RBP2.01□□□□□ -2.09
CDC27-216ENST00000574304 MTFP1Q9UDX5 166 aa2.01□□□□□ -2.09
CDC27-216ENST00000574304 LGALS13Q9UHV8 139 aa2.01□□□□□ -2.09
CDC27-216ENST00000574304 MMACHCQ9Y4U1 282 aa2.01□□□□□ -2.09
CDC27-216ENST00000574304 FBN1P35555 2871 aaKnown RBP2.01□□□□□ -2.09
CDC27-216ENST00000574304 IGHV3-49A0A0A0MS15 119 aa2□□□□□ -2.09
CDC27-216ENST00000574304 IGHV1-3A0A0C4DH29 117 aa2□□□□□ -2.09
CDC27-216ENST00000574304 LYRM9A8MSI8 78 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms