RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 NOS3P29474 1203 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 CRABP1P29762 137 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 LIPAP38571 399 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 LCN2P80188 198 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 CDK5R2Q13319 367 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 ZMAT1Q5H9K5 638 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 OR2T2Q6IF00 324 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 PGBD2Q6P3X8 592 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 ZNF620Q6ZNG0 422 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 CFAP77Q6ZQR2 320 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 C1orf229Q6ZS94 237 aaPredicted RBP11.63□□□□□ -0.55
RAB40B-204ENST00000571554 C1orf174Q8IYL3 243 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 OR10AD1Q8NGE0 317 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 OR52E2Q8NGJ4 325 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 GNPDA2Q8TDQ7 276 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 ITLN1Q8WWA0 313 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 IL1RAPQ9NPH3 570 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 G6PC2Q9NQR9 355 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 CGGBP1Q9UFW8 167 aaPredicted RBP11.63□□□□□ -0.55
RAB40B-204ENST00000571554 METRNQ9UJH8 293 aa11.63□□□□□ -0.55
RAB40B-204ENST00000571554 OR6C68A6NDL8 312 aa11.62□□□□□ -0.55
RAB40B-204ENST00000571554 B2RBV5 119 aa11.62□□□□□ -0.55
RAB40B-204ENST00000571554 CD55P08174 381 aa11.62□□□□□ -0.55
RAB40B-204ENST00000571554 SBK2P0C263 348 aa11.62□□□□□ -0.55
RAB40B-204ENST00000571554 KITLGP21583 273 aa11.62□□□□□ -0.55
RAB40B-204ENST00000571554 PYCR1P32322 319 aa11.62□□□□□ -0.55
RAB40B-204ENST00000571554 RPS27P42677 84 aaKnown RBP11.62□□□□□ -0.55
RAB40B-204ENST00000571554 GSSP48637 474 aa11.62□□□□□ -0.55
RAB40B-204ENST00000571554 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.62□□□□□ -0.55
RAB40B-204ENST00000571554 KCNMB1Q16558 191 aa11.62□□□□□ -0.55
RAB40B-204ENST00000571554 LIPNQ5VXI9 398 aa11.62□□□□□ -0.55
RAB40B-204ENST00000571554 RFLNBQ8N5W9 214 aa11.62□□□□□ -0.55
RAB40B-204ENST00000571554 FITM2Q8N6M3 262 aa11.62□□□□□ -0.55
RAB40B-204ENST00000571554 CYB561A3Q8NBI2 242 aa11.62□□□□□ -0.55
RAB40B-204ENST00000571554 BHLHE23Q8NDY6 225 aa11.62□□□□□ -0.55
RAB40B-204ENST00000571554 GJC3Q8NFK1 279 aa11.62□□□□□ -0.55
RAB40B-204ENST00000571554 SLC26A10Q8NG04 563 aa11.62□□□□□ -0.55
RAB40B-204ENST00000571554 HAVCR1Q96D42 359 aa11.62□□□□□ -0.55
RAB40B-204ENST00000571554 OR2V2Q96R30 315 aa11.62□□□□□ -0.55
RAB40B-204ENST00000571554 DIRC2Q96SL1 478 aa11.62□□□□□ -0.55
RAB40B-204ENST00000571554 BTBD10Q9BSF8 475 aa11.62□□□□□ -0.55
RAB40B-204ENST00000571554 NPTNQ9Y639 398 aa11.62□□□□□ -0.55
RAB40B-204ENST00000571554 WNK2Q9Y3S1 2297 aa11.62□□□□□ -0.55
RAB40B-204ENST00000571554 F5H5K5 113 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 H0YL77 283 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 TNFRSF11BO00300 401 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 ARPC3O15145 178 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 ANPEPP15144 967 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 TNFSF4P23510 183 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 IFNGR2P38484 337 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 HIST1H3AP68431 136 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 TSPAN31Q12999 210 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 HIST2H3PS2Q5TEC6 136 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 DCAF12L2Q5VW00 463 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 SLC18B1Q6NT16 456 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 LYPD4Q6UWN0 246 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 HIST2H3AQ71DI3 136 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 PEG10Q86TG7 708 aaKnown RBP11.61□□□□□ -0.55
RAB40B-204ENST00000571554 NAA40Q86UY6 237 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 ATG16L2Q8NAA4 619 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 OR51L1Q8NGJ5 315 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 OR8D4Q8NGM9 314 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 ZNF420Q8TAQ5 688 aaPredicted RBP11.61□□□□□ -0.55
RAB40B-204ENST00000571554 PTP4A1Q93096 173 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 PITX2Q99697 317 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 COQ7Q99807 217 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 TMPRSS13Q9BYE2 586 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 PLA2G12AQ9BZM1 189 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 HDHD2Q9H0R4 259 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 TMEM106BQ9NUM4 274 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 NDE1Q9NXR1 346 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 VNN3Q9NY84 501 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 LYVE1Q9Y5Y7 322 aa11.61□□□□□ -0.55
RAB40B-204ENST00000571554 A0A0G2JMP0 313 aa11.6□□□□□ -0.55
RAB40B-204ENST00000571554 A0A0X1KG70 313 aa11.6□□□□□ -0.55
RAB40B-204ENST00000571554 TCRBV5S2A0A599 114 aa11.6□□□□□ -0.55
RAB40B-204ENST00000571554 TVP23AA6NH52 213 aa11.6□□□□□ -0.55
RAB40B-204ENST00000571554 ZNF205O95201 554 aa11.6□□□□□ -0.55
RAB40B-204ENST00000571554 VENTXO95231 258 aa11.6□□□□□ -0.55
RAB40B-204ENST00000571554 IGHV2-70P01814 119 aa11.6□□□□□ -0.55
RAB40B-204ENST00000571554 RAC2P15153 192 aa11.6□□□□□ -0.55
RAB40B-204ENST00000571554 ZFP36P26651 326 aaKnown RBP11.6□□□□□ -0.55
RAB40B-204ENST00000571554 SEC61A1P61619 476 aaKnown RBP11.6□□□□□ -0.55
RAB40B-204ENST00000571554 SLC3A1Q07837 685 aa11.6□□□□□ -0.55
RAB40B-204ENST00000571554 COX10Q12887 443 aa11.6□□□□□ -0.55
RAB40B-204ENST00000571554 RSPO1Q2MKA7 263 aaPredicted RBP11.6□□□□□ -0.55
RAB40B-204ENST00000571554 PGM2L1Q6PCE3 622 aa11.6□□□□□ -0.55
RAB40B-204ENST00000571554 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.6□□□□□ -0.55
RAB40B-204ENST00000571554 OR4M2Q8NGB6 313 aa11.6□□□□□ -0.55
RAB40B-204ENST00000571554 ZNRF4Q8WWF5 429 aa11.6□□□□□ -0.55
RAB40B-204ENST00000571554 APOBEC3DQ96AK3 386 aaPredicted RBP11.6□□□□□ -0.55
RAB40B-204ENST00000571554 CCT8L2Q96SF2 557 aa11.6□□□□□ -0.55
RAB40B-204ENST00000571554 CDADC1Q9BWV3 514 aa11.6□□□□□ -0.55
RAB40B-204ENST00000571554 MRPL22Q9NWU5 206 aaKnown RBP11.6□□□□□ -0.55
RAB40B-204ENST00000571554 ACTR3BQ9P1U1 418 aa11.6□□□□□ -0.55
RAB40B-204ENST00000571554 PCDHB10Q9UN67 800 aa11.6□□□□□ -0.55
RAB40B-204ENST00000571554 PPP1R3CQ9UQK1 317 aa11.6□□□□□ -0.55
RAB40B-204ENST00000571554 CDH10Q9Y6N8 788 aa11.6□□□□□ -0.55
RAB40B-204ENST00000571554 U3KQV3 271 aa11.6□□□□□ -0.55
RAB40B-204ENST00000571554 SOX14O95416 240 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms