RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 SLC6A8P48029 635 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 MRPL19P49406 292 aaKnown RBP3.3□□□□□ -1.88
NUP88-202ENST00000570937 ATP4BP51164 291 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 P2RX1P51575 399 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 CRISP3P54108 245 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 CLDN15P56746 228 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 SRYQ05066 204 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 SGCBQ16585 318 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 SLC25A35Q3KQZ1 300 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 ARHGAP11BQ3KRB8 267 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 GPAT3Q53EU6 434 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 EIPR1Q53HC9 387 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 CCNJQ5T5M9 372 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 RIPPLY2Q5TAB7 128 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 AP1ARQ63HQ0 302 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 SAXO2Q658L1 398 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 C3P1Q6ZMU1 363 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 IL17RELQ6ZVW7 336 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 P4HA3Q7Z4N8 544 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 GALNT10Q86SR1 603 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 ANKRD46Q86W74 232 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 RNF130Q86XS8 419 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 PEX5LQ8IYB4 626 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 CLECL1Q8IZS7 167 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 FADS6Q8N9I5 356 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 POMGNT2Q8NAT1 580 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 CHDHQ8NE62 594 aaPredicted RBP3.3□□□□□ -1.88
NUP88-202ENST00000570937 OR2M3Q8NG83 312 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 OR5D16Q8NGK9 328 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 OR5AK3PQ8NH89 298 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 LILRB4Q8NHJ6 448 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 FBXO30Q8TB52 745 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 RNF138Q8WVD3 245 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 ITLN2Q8WWU7 325 aaPredicted RBP3.3□□□□□ -1.88
NUP88-202ENST00000570937 TMEM234Q8WY98 164 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 ROPN1LQ96C74 230 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 NTNG2Q96CW9 530 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 FAM71F1Q96KD3 344 aaPredicted RBP3.3□□□□□ -1.88
NUP88-202ENST00000570937 SLC35G5Q96KT7 338 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 OR52B2Q96RD2 323 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 SDF2Q99470 211 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 FEVQ99581 238 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 SH3GL1Q99961 368 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 DCTN5Q9BTE1 182 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 UGT2B28Q9BY64 529 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 PRRG4Q9BZD6 226 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 OR51I1Q9H343 314 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 SLCO1B3Q9NPD5 702 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 FANCFQ9NPI8 374 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 GLRX2Q9NS18 164 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 MED11Q9P086 117 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 CCDC167Q9P0B6 97 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 SPRR3Q9UBC9 169 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 P2RX2Q9UBL9 471 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 RNF6Q9Y252 685 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 SLC35A3Q9Y2D2 325 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 RPH3AQ9Y2J0 694 aaPredicted RBP3.3□□□□□ -1.88
NUP88-202ENST00000570937 SLC6A5Q9Y345 797 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 NDUFAF1Q9Y375 327 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 WDR45Q9Y484 360 aa3.3□□□□□ -1.88
NUP88-202ENST00000570937 RP1L1Q8IWN7 2480 aaPredicted RBP3.3□□□□□ -1.88
NUP88-202ENST00000570937 BAHCC1Q9P281 2608 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 IGHV3OR16-10A0A075B7F0 116 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 A0A096LPI6 279 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 A0A1W2PP18 115 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 A0A1W2PPK0 400 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 PRORSD1PA6NEY8 169 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 SLC22A20A6NK97 555 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 HMGN4O00479 90 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 GMFGO60234 142 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 FCMRO60667 390 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 CCDC22O60826 627 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 SCN2BO60939 215 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 RCBTB2O95199 551 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 CSTAP01040 98 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 NPPAP01160 153 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 IGKV1D-16P01601 117 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 CRHP06850 196 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 DBIP07108 87 aaKnown RBP3.29□□□□□ -1.88
NUP88-202ENST00000570937 CSN3P07498 182 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 OR12D1P0DN82 309 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 COX6B1P14854 86 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 ZNF708P17019 499 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 PGCP20142 388 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 SHC1P29353 583 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 IL12AP29459 219 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 PCGF2P35227 344 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 MDH1P40925 334 aaKnown RBP3.29□□□□□ -1.88
NUP88-202ENST00000570937 CCR4P51679 360 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 CASP9P55211 416 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 CARD18P57730 90 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 NUP107P57740 925 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 KRTAP10-3P60369 221 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 DSTNP60981 165 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 COPZ1P61923 177 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 FADDQ13158 208 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 CYLC2Q14093 348 aaPredicted RBP3.29□□□□□ -1.88
NUP88-202ENST00000570937 VEZF1Q14119 521 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 MAPRE2Q15555 327 aa3.29□□□□□ -1.88
NUP88-202ENST00000570937 ZNF141Q15928 474 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms