RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 NUAK2Q9H093 628 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 UNKLQ9H9P5 680 aaKnown RBP7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 NMNAT1Q9HAN9 279 aaPredicted RBP7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 IL19Q9UHD0 177 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 POLR1DQ9Y2S0 133 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 IER3IP1Q9Y5U9 82 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 CAPN7Q9Y6W3 813 aa7.22□□□□□ -1.25
CTDNEP1-203ENST00000570385 TRAV40A0A0B4J280 105 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 HTR3EA5X5Y0 456 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 OR6C6A6NF89 314 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 F5H0A9 414 aaPredicted RBP7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 SURF4O15260 269 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 KHDRBS3O75525 346 aaKnown RBP7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 SASH3O75995 380 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 DIRAS1O95057 198 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 HLA-DPB1P04440 258 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 RAC2P15153 192 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 SLC7A2P52569 658 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 PAX8Q06710 450 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 AQP6Q13520 282 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 SLC9A3R2Q15599 337 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 ANKDD1AQ495B1 522 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 LEG1Q6P5S2 330 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 PTCHD4Q6ZW05 846 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 TMPRSS11FQ6ZWK6 438 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 TSEN54Q7Z6J9 526 aaKnown RBP7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 MOGAT3Q86VF5 341 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 KLBQ86Z14 1044 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 GLB1L2Q8IW92 636 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 RNF113BQ8IZP6 322 aaKnown RBP7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 PARP8Q8N3A8 854 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 SLC7A13Q8TCU3 470 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 FAM162AQ96A26 154 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 MEGF10Q96KG7 1140 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 ZNF582Q96NG8 517 aaPredicted RBP7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 GPA33Q99795 319 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 SSBP3Q9BWW4 388 aaPredicted RBP7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 TMEM165Q9HC07 324 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 RPS6KA6Q9UK32 745 aa7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 POLR3KQ9Y2Y1 108 aaPredicted RBP7.21□□□□□ -1.26
CTDNEP1-203ENST00000570385 PKD1L1Q8TDX9 2849 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 TRBV4-1A0A0J9YWV2 114 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 A8MXK9 166 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 DCTN6O00399 190 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 NME4O00746 187 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 MLNRO43193 412 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 PTP4A3O75365 173 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 NDUFB2O95178 105 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 PPP1R3DO95685 299 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 H1F0P07305 194 aaKnown RBP7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 RNASE1P07998 156 aaKnown RBP7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 MDKP21741 143 aaPredicted RBP7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 SDHAP31040 664 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 PMELP40967 661 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 CDKN2AP42771 156 aaKnown RBP7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 GSK3BP49841 420 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 GNB2P62879 340 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 PAX2Q02962 417 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 SRSF4Q08170 494 aaKnown RBP7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 SEC23BQ15437 767 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 TUSC1Q2TAM9 212 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 PRR31Q5SQ13 230 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 SLC27A4Q6P1M0 643 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 LYPD2Q6UXB3 125 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 BTNL3Q6UXE8 466 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 BRD3OSQ6XYD6 125 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 CBLL1Q75N03 491 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 SPATC1Q76KD6 591 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 NAA40Q86UY6 237 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 LINC00346Q8IVM7 164 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 MUC20Q8N307 709 aaPredicted RBP7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 BOLLQ8N9W6 283 aaKnown RBP7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 OR8G5Q8NG78 346 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 OR5L1Q8NGL2 311 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 OR13G1Q8NGZ3 307 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 OR52J3Q8NH60 311 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 SLC25A28Q96A46 364 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 RSRC1Q96IZ7 334 aaKnown RBP7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 TMEM246Q9BRR3 403 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 WACQ9BTA9 647 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 SRA1Q9HD15 236 aaKnown RBP7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 NRIP3Q9NQ35 241 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 UFSP2Q9NUQ7 469 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 SIGLEC7Q9Y286 467 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 LRCH1Q9Y2L9 728 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 LHFPL6Q9Y693 200 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 ENPP4Q9Y6X5 453 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 V9GYQ6 96 aa7.2□□□□□ -1.26
CTDNEP1-203ENST00000570385 IGHV2-70DA0A0C4DH43 119 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 UNC119BA6NIH7 251 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 F5H5K5 113 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 HOXA3O43365 443 aaPredicted RBP7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 AHCYL1O43865 530 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 COX4I1P13073 169 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 TUBG1P23258 451 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 FPR3P25089 353 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 OMPP47874 163 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 MTNR1AP48039 350 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 SRP9P49458 86 aaKnown RBP7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 FXYD6P3P58550 94 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms