RNA–Protein interactions for RNA: ENST00000570356.1

ACSF2-225, Transcript of acyl-CoA synthetase family member 2, human

TSL 5

Gene ACSF2, Length 380 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSF2-225	ENST00000570356	CRISP1	P54107	249 aa		13.55	□□□□□ -0.24
ACSF2-225	ENST00000570356	ESRRG	P62508	458 aa		13.55	□□□□□ -0.24
ACSF2-225	ENST00000570356	ECH1	Q13011	328 aa		13.55	□□□□□ -0.24
ACSF2-225	ENST00000570356	NKPD1	Q17RQ9	610 aa		13.55	□□□□□ -0.24
ACSF2-225	ENST00000570356	RSPO1	Q2MKA7	263 aa	Predicted RBP	13.55	□□□□□ -0.24
ACSF2-225	ENST00000570356	ZNF718	Q3SXZ3	478 aa		13.55	□□□□□ -0.24
ACSF2-225	ENST00000570356	TEX30	Q5JUR7	227 aa		13.55	□□□□□ -0.24
ACSF2-225	ENST00000570356	ZFP1	Q6P2D0	407 aa		13.55	□□□□□ -0.24
ACSF2-225	ENST00000570356	OR10S1	Q8NGN2	331 aa		13.55	□□□□□ -0.24
ACSF2-225	ENST00000570356	OR6K6	Q8NGW6	343 aa		13.55	□□□□□ -0.24
ACSF2-225	ENST00000570356	OR2AJ1	Q8NGZ0	328 aa		13.55	□□□□□ -0.24
ACSF2-225	ENST00000570356	PTP4A1	Q93096	173 aa		13.55	□□□□□ -0.24
ACSF2-225	ENST00000570356	ATF6B	Q99941	703 aa		13.55	□□□□□ -0.24
ACSF2-225	ENST00000570356	SMR3A	Q99954	134 aa		13.55	□□□□□ -0.24
ACSF2-225	ENST00000570356	CDADC1	Q9BWV3	514 aa		13.55	□□□□□ -0.24
ACSF2-225	ENST00000570356	POFUT1	Q9H488	388 aa		13.55	□□□□□ -0.24
ACSF2-225	ENST00000570356	GSX1	Q9H4S2	264 aa	Predicted RBP	13.55	□□□□□ -0.24
ACSF2-225	ENST00000570356	WDR76	Q9H967	626 aa		13.55	□□□□□ -0.24
ACSF2-225	ENST00000570356	MARCH7	Q9H992	704 aa		13.55	□□□□□ -0.24
ACSF2-225	ENST00000570356	TUBG2	Q9NRH3	451 aa		13.55	□□□□□ -0.24
ACSF2-225	ENST00000570356	KRT84	Q9NSB2	600 aa		13.55	□□□□□ -0.24
ACSF2-225	ENST00000570356	DDX28	Q9NUL7	540 aa	Known RBP	13.55	□□□□□ -0.24
ACSF2-225	ENST00000570356	OAZ3	Q9UMX2	235 aa		13.55	□□□□□ -0.24
ACSF2-225	ENST00000570356	GRIP1	Q9Y3R0	1128 aa		13.55	□□□□□ -0.24
ACSF2-225	ENST00000570356	NSD1	Q96L73	2696 aa	Predicted RBP	13.55	□□□□□ -0.24
ACSF2-225	ENST00000570356	NDUFS8	O00217	210 aa		13.54	□□□□□ -0.24
ACSF2-225	ENST00000570356	SMAD7	O15105	426 aa	Known RBP	13.54	□□□□□ -0.24
ACSF2-225	ENST00000570356	MITF	O75030	526 aa	Predicted RBP	13.54	□□□□□ -0.24
ACSF2-225	ENST00000570356	NAT2	P11245	290 aa		13.54	□□□□□ -0.24
ACSF2-225	ENST00000570356	SLC25A16	P16260	332 aa		13.54	□□□□□ -0.24
ACSF2-225	ENST00000570356	GCH1	P30793	250 aa		13.54	□□□□□ -0.24
ACSF2-225	ENST00000570356	RPS27	P42677	84 aa	Known RBP	13.54	□□□□□ -0.24
ACSF2-225	ENST00000570356	ENTPD1	P49961	510 aa		13.54	□□□□□ -0.24
ACSF2-225	ENST00000570356	PDLIM4	P50479	330 aa		13.54	□□□□□ -0.24
ACSF2-225	ENST00000570356	MOG	Q16653	247 aa		13.54	□□□□□ -0.24
ACSF2-225	ENST00000570356	TMEM236	Q5W0B7	351 aa		13.54	□□□□□ -0.24
ACSF2-225	ENST00000570356	COLCA1	Q6ZS62	124 aa		13.54	□□□□□ -0.24
ACSF2-225	ENST00000570356	ZNF511	Q8NB15	262 aa		13.54	□□□□□ -0.24
ACSF2-225	ENST00000570356	SNX33	Q8WV41	574 aa		13.54	□□□□□ -0.24
ACSF2-225	ENST00000570356	COG8	Q96MW5	612 aa		13.54	□□□□□ -0.24
ACSF2-225	ENST00000570356	PITX2	Q99697	317 aa		13.54	□□□□□ -0.24
ACSF2-225	ENST00000570356	SEMA6A	Q9H2E6	1030 aa		13.54	□□□□□ -0.24
ACSF2-225	ENST00000570356	HINT3	Q9NQE9	182 aa	Known RBP	13.54	□□□□□ -0.24
ACSF2-225	ENST00000570356	TMEFF2	Q9UIK5	374 aa	Predicted RBP	13.54	□□□□□ -0.24
ACSF2-225	ENST00000570356	GPR160	Q9UJ42	338 aa		13.54	□□□□□ -0.24
ACSF2-225	ENST00000570356	NAV3	Q8IVL0	2385 aa		13.54	□□□□□ -0.24
ACSF2-225	ENST00000570356	ANK3	Q12955	4377 aa	Known RBP	13.54	□□□□□ -0.24
ACSF2-225	ENST00000570356	LOC390937	A0A1W2PQ73	354 aa		13.53	□□□□□ -0.24
ACSF2-225	ENST00000570356	C17orf100	A8MU93	164 aa		13.53	□□□□□ -0.24
ACSF2-225	ENST00000570356	VWC2L	B2RUY7	222 aa		13.53	□□□□□ -0.24
ACSF2-225	ENST00000570356	PRR23D1	E9PI22	279 aa	Predicted RBP	13.53	□□□□□ -0.24
ACSF2-225	ENST00000570356	PRODH	O43272	600 aa		13.53	□□□□□ -0.24
ACSF2-225	ENST00000570356	GLCE	O94923	617 aa		13.53	□□□□□ -0.24
ACSF2-225	ENST00000570356	PRR23D2	P0DMB1	279 aa	Predicted RBP	13.53	□□□□□ -0.24
ACSF2-225	ENST00000570356	DAO	P14920	347 aa		13.53	□□□□□ -0.24
ACSF2-225	ENST00000570356	GSTT1	P30711	240 aa		13.53	□□□□□ -0.24
ACSF2-225	ENST00000570356	MMP15	P51511	669 aa		13.53	□□□□□ -0.24
ACSF2-225	ENST00000570356	PPP2R2B	Q00005	443 aa		13.53	□□□□□ -0.24
ACSF2-225	ENST00000570356	PTGES3	Q15185	160 aa	Known RBP	13.53	□□□□□ -0.24
ACSF2-225	ENST00000570356	ALKBH6	Q3KRA9	238 aa		13.53	□□□□□ -0.24
ACSF2-225	ENST00000570356	PLBD1	Q6P4A8	553 aa		13.53	□□□□□ -0.24
ACSF2-225	ENST00000570356	GTF3A	Q92664	365 aa	Known RBP	13.53	□□□□□ -0.24
ACSF2-225	ENST00000570356	RAB3IP	Q96QF0	476 aa	Predicted RBP	13.53	□□□□□ -0.24
ACSF2-225	ENST00000570356	CIB1	Q99828	191 aa		13.53	□□□□□ -0.24
ACSF2-225	ENST00000570356	PKP2	Q99959	881 aa		13.53	□□□□□ -0.24
ACSF2-225	ENST00000570356	TEX12	Q9BXU0	123 aa		13.53	□□□□□ -0.24
ACSF2-225	ENST00000570356	NKIRAS2	Q9NYR9	191 aa		13.53	□□□□□ -0.24
ACSF2-225	ENST00000570356	CGGBP1	Q9UFW8	167 aa	Predicted RBP	13.53	□□□□□ -0.24
ACSF2-225	ENST00000570356	ENOPH1	Q9UHY7	261 aa		13.53	□□□□□ -0.24
ACSF2-225	ENST00000570356	STARD10	Q9Y365	291 aa		13.53	□□□□□ -0.24
ACSF2-225	ENST00000570356	NF1	P21359	2839 aa		13.52	□□□□□ -0.24
ACSF2-225	ENST00000570356	ZAR1L	A6NP61	321 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	NCR1	O76036	304 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	HPX	P02790	462 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	SPARC	P09486	303 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	ACSM4	P0C7M7	580 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	SLC2A5	P22732	501 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	IGFBP5	P24593	272 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	EPHA2	P29317	976 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	OTX1	P32242	354 aa	Predicted RBP	13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	KRTAP1-1	Q07627	177 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	PSG7	Q13046	419 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	PCGF3	Q3KNV8	242 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	SLX4IP	Q5VYV7	408 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	TMEM154	Q6P9G4	183 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	DCXR	Q7Z4W1	244 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	CPO	Q8IVL8	374 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	TIGD4	Q8IY51	512 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	ZNF786	Q8N393	782 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	MAPK1IP1L	Q8NDC0	245 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	BBS1	Q8NFJ9	593 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	ST7L	Q8TDW4	575 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	APOBEC3D	Q96AK3	386 aa	Predicted RBP	13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	INTS14	Q96SY0	518 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	PIMREG	Q9BSJ6	248 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	OSBPL10	Q9BXB5	764 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	C1QTNF5	Q9BXJ0	243 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	OR51V1	Q9H2C8	321 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	TVP23B	Q9NYZ1	205 aa		13.52	□□□□□ -0.25
ACSF2-225	ENST00000570356	ZSCAN5B	A6NJL1	495 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms