RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 NCCRP1Q6ZVX7 275 aaPredicted RBP1.3□□□□□ -2.2
UBR1-209ENST00000569243 ASCL5Q7RTU5 278 aa1.3□□□□□ -2.2
UBR1-209ENST00000569243 LHFPL3Q86UP9 236 aa1.3□□□□□ -2.2
UBR1-209ENST00000569243 PUSL1Q8N0Z8 303 aaKnown RBP1.3□□□□□ -2.2
UBR1-209ENST00000569243 CSGALNACT2Q8N6G5 542 aa1.3□□□□□ -2.2
UBR1-209ENST00000569243 TRIML2Q8N7C3 387 aa1.3□□□□□ -2.2
UBR1-209ENST00000569243 ASCC1Q8N9N2 400 aaKnown RBP1.3□□□□□ -2.2
UBR1-209ENST00000569243 ST20-AS1Q8NBB2 130 aa1.3□□□□□ -2.2
UBR1-209ENST00000569243 FAM83FQ8NEG4 500 aaPredicted RBP1.3□□□□□ -2.2
UBR1-209ENST00000569243 SDR9C7Q8NEX9 313 aa1.3□□□□□ -2.2
UBR1-209ENST00000569243 OR9A2Q8NGT5 310 aa1.3□□□□□ -2.2
UBR1-209ENST00000569243 COQ8AQ8NI60 647 aa1.3□□□□□ -2.2
UBR1-209ENST00000569243 FAM81AQ8TBF8 368 aa1.3□□□□□ -2.2
UBR1-209ENST00000569243 FAM110BQ8TC76 370 aa1.3□□□□□ -2.2
UBR1-209ENST00000569243 SLC2A14Q8TDB8 520 aa1.3□□□□□ -2.2
UBR1-209ENST00000569243 ASZ1Q8WWH4 475 aa1.3□□□□□ -2.2
UBR1-209ENST00000569243 RBMXL1Q96E39 390 aaKnown RBP1.3□□□□□ -2.2
UBR1-209ENST00000569243 C19orf60Q96EN9 201 aa1.3□□□□□ -2.2
UBR1-209ENST00000569243 CATSPER2Q96P56 530 aa1.3□□□□□ -2.2
UBR1-209ENST00000569243 P2RX4Q99571 388 aa1.3□□□□□ -2.2
UBR1-209ENST00000569243 TRIM62Q9BVG3 475 aa1.3□□□□□ -2.2
UBR1-209ENST00000569243 CCDC94Q9BW85 323 aaPredicted RBP1.3□□□□□ -2.2
UBR1-209ENST00000569243 FRMD8P1Q9BZ68 369 aaPredicted RBP1.3□□□□□ -2.2
UBR1-209ENST00000569243 PKIBQ9C010 78 aa1.3□□□□□ -2.2
UBR1-209ENST00000569243 OR2AG1Q9H205 316 aa1.3□□□□□ -2.2
UBR1-209ENST00000569243 FBXO44Q9H4M3 255 aa1.3□□□□□ -2.2
UBR1-209ENST00000569243 SPACA1Q9HBV2 294 aa1.3□□□□□ -2.2
UBR1-209ENST00000569243 NEK6Q9HC98 313 aa1.3□□□□□ -2.2
UBR1-209ENST00000569243 TREM1Q9NP99 234 aa1.3□□□□□ -2.2
UBR1-209ENST00000569243 POLE4Q9NR33 117 aa1.3□□□□□ -2.2
UBR1-209ENST00000569243 SAMSN1Q9NSI8 373 aaKnown RBP1.3□□□□□ -2.2
UBR1-209ENST00000569243 GMEB1Q9Y692 573 aa1.3□□□□□ -2.2
UBR1-209ENST00000569243 SEC16AO15027 2179 aa1.3□□□□□ -2.2
UBR1-209ENST00000569243 IGHV3OR16-8A0A075B7F1 116 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 TRAV26-1A0A087WT03 109 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 GABRR3A8MPY1 467 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 HIDE1A8MVS5 230 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 ZNF879B4DU55 563 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 HSBP1L1C9JCN9 74 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 DNASE2O00115 360 aaPredicted RBP1.29□□□□□ -2.2
UBR1-209ENST00000569243 SOCS1O15524 211 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 NDUFS6O75380 124 aaKnown RBP1.29□□□□□ -2.2
UBR1-209ENST00000569243 UTS2O95399 124 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 GLAP06280 429 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 GNAO1P09471 354 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 UBTFL6P0CB48 400 aaPredicted RBP1.29□□□□□ -2.2
UBR1-209ENST00000569243 SLC2A3P11169 496 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 DBTP11182 482 aaKnown RBP1.29□□□□□ -2.2
UBR1-209ENST00000569243 NEFHP12036 1026 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 ZNF3P17036 446 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 LGALS3P17931 250 aaKnown RBP1.29□□□□□ -2.2
UBR1-209ENST00000569243 U2AF2P26368 475 aaKnown RBP eCLIP1.29□□□□□ -2.22e-8■■■□□ 14.7
UBR1-209ENST00000569243 CD1CP29017 333 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 GPR4P46093 362 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 FBXW4P57775 412 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 RPS15P62841 145 aaKnown RBP1.29□□□□□ -2.2
UBR1-209ENST00000569243 SIGLEC14Q08ET2 396 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 COTL1Q14019 142 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 PIGHQ14442 188 aaPredicted RBP1.29□□□□□ -2.2
UBR1-209ENST00000569243 EXOC3L2Q2M3D2 409 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 SMUG1Q53HV7 270 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 SPIN3Q5JUX0 258 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 SPANXN2Q5MJ10 180 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 CCDC122Q5T0U0 273 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 PDZK1Q5T2W1 519 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 LIN9Q5TKA1 542 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 PDPK2PQ6A1A2 396 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 OR2A2Q6IF42 318 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 PRMT9Q6P2P2 845 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 TMEM220Q6QAJ8 160 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 SPINT4Q6UDR6 99 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 Q6ZPB1 254 aaPredicted RBP1.29□□□□□ -2.2
UBR1-209ENST00000569243 BZW1Q7L1Q6 419 aaKnown RBP1.29□□□□□ -2.2
UBR1-209ENST00000569243 EIF3MQ7L2H7 374 aaKnown RBP1.29□□□□□ -2.2
UBR1-209ENST00000569243 LUZP2Q86TE4 346 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 NELFCDQ8IXH7 590 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 SYCE1Q8N0S2 351 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 LRRC75A-AS1Q8N1F1 130 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 NECAB1Q8N987 351 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 SPATA4Q8NEY3 305 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 OR4A15Q8NGL6 344 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 OR1L4Q8NGR5 311 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 KCNG3Q8TAE7 436 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 SCFD1Q8WVM8 642 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 MED8Q96G25 268 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 HSFY1Q96LI6 401 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 IQCGQ9H095 443 aaKnown RBP1.29□□□□□ -2.2
UBR1-209ENST00000569243 C8orf33Q9H7E9 229 aaPredicted RBP1.29□□□□□ -2.2
UBR1-209ENST00000569243 TMEM185BQ9H7F4 350 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 GEMIN7Q9H840 131 aaKnown RBP1.29□□□□□ -2.2
UBR1-209ENST00000569243 MTCH1Q9NZJ7 389 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 CTSFQ9UBX1 484 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 SLC7A8Q9UHI5 535 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 CDH9Q9ULB4 789 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 TBC1D24Q9ULP9 559 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 DDX49Q9Y6V7 483 aaKnown RBP1.29□□□□□ -2.2
UBR1-209ENST00000569243 MAP3K19Q56UN5 1328 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 INSRP06213 1382 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 NINLQ9Y2I6 1382 aa1.29□□□□□ -2.2
UBR1-209ENST00000569243 MYO16Q9Y6X6 1858 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms