RNA–Protein interactions for RNA: ENST00000568329.5

CSK-211, Transcript of C-terminal Src kinase, human

TSL 5

Gene CSK, Length 1,552 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSK-211	ENST00000568329	TMIGD3	P0DMS9	266 aa	Predicted RBP	13.5	□□□□□ -0.25
CSK-211	ENST00000568329	MAPK3	P27361	379 aa	Predicted RBP	13.5	□□□□□ -0.25
CSK-211	ENST00000568329	C3P1	Q6ZMU1	363 aa		13.5	□□□□□ -0.25
CSK-211	ENST00000568329	ZNF704	Q6ZNC4	412 aa	Predicted RBP	13.5	□□□□□ -0.25
CSK-211	ENST00000568329	CATSPERD	Q86XM0	798 aa		13.5	□□□□□ -0.25
CSK-211	ENST00000568329	ZNF676	Q8N7Q3	588 aa		13.5	□□□□□ -0.25
CSK-211	ENST00000568329	ABHD4	Q8TB40	342 aa		13.5	□□□□□ -0.25
CSK-211	ENST00000568329	HSD17B8	Q92506	261 aa		13.5	□□□□□ -0.25
CSK-211	ENST00000568329	HTRA1	Q92743	480 aa		13.5	□□□□□ -0.25
CSK-211	ENST00000568329	SPTSSA	Q969W0	71 aa		13.5	□□□□□ -0.25
CSK-211	ENST00000568329	DOCK7	Q96N67	2140 aa		13.5	□□□□□ -0.25
CSK-211	ENST00000568329	SH3GL3	Q99963	347 aa		13.5	□□□□□ -0.25
CSK-211	ENST00000568329	DCUN1D5	Q9BTE7	237 aa		13.5	□□□□□ -0.25
CSK-211	ENST00000568329	SFXN3	Q9BWM7	321 aa		13.5	□□□□□ -0.25
CSK-211	ENST00000568329	HDHD5	Q9BXW7	423 aa		13.5	□□□□□ -0.25
CSK-211	ENST00000568329	PROCR	Q9UNN8	238 aa		13.5	□□□□□ -0.25
CSK-211	ENST00000568329	ARHGAP21	Q5T5U3	1957 aa		13.5	□□□□□ -0.25
CSK-211	ENST00000568329	SRSF10	O75494	262 aa	Known RBP	13.49	□□□□□ -0.25
CSK-211	ENST00000568329	TNFSF13	O75888	250 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	IL1A	P01583	271 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	UBC	P0CG48	685 aa	Known RBP	13.49	□□□□□ -0.25
CSK-211	ENST00000568329	GLI4	P10075	376 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	CD8B	P10966	210 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	CEACAM8	P31997	349 aa	Predicted RBP	13.49	□□□□□ -0.25
CSK-211	ENST00000568329	SERPINB10	P48595	397 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	DGUOK	Q16854	277 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	WDR38	Q5JTN6	314 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	C22orf42	Q6IC83	251 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	SKA3	Q8IX90	412 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	C1orf162	Q8NEQ5	155 aa	Predicted RBP	13.49	□□□□□ -0.25
CSK-211	ENST00000568329	NDNF	Q8TB73	568 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	PDCD1LG2	Q9BQ51	273 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	MED18	Q9BUE0	208 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	GALNT8	Q9NY28	637 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	SLC5A6	Q9Y289	635 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	CACNA1B	Q00975	2339 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	DOK2	O60496	412 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	UBL3	O95164	117 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	ISG15	P05161	165 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	ITGA5	P08648	1049 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	HOXB1	P14653	301 aa	Predicted RBP	13.49	□□□□□ -0.25
CSK-211	ENST00000568329	ZNF182	P17025	639 aa	Predicted RBP	13.49	□□□□□ -0.25
CSK-211	ENST00000568329	ZNF32	P17041	273 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	PCSK6	P29122	969 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	ARR3	P36575	388 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	CASP6	P55212	293 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	FOXF2	Q12947	444 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	ACSM3	Q53FZ2	586 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	CCDC92	Q53HC0	331 aa	Predicted RBP	13.49	□□□□□ -0.25
CSK-211	ENST00000568329	BCL2L15	Q5TBC7	163 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	TMEM244	Q5VVB8	128 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	TMEM91	Q6ZNR0	172 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	PRSS35	Q8N3Z0	413 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	OR1K1	Q8NGR3	316 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	DYNC2LI1	Q8TCX1	351 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	GPR148	Q8TDV2	347 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	PHF3	Q92576	2039 aa	Known RBP	13.49	□□□□□ -0.25
CSK-211	ENST00000568329	TRMT61A	Q96FX7	289 aa	Known RBP	13.49	□□□□□ -0.25
CSK-211	ENST00000568329	BOD1	Q96IK1	185 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	OR2H1	Q9GZK4	316 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	SP140L	Q9H930	580 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	FAM206A	Q9NX38	181 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	NUFIP1	Q9UHK0	495 aa	Known RBP	13.49	□□□□□ -0.25
CSK-211	ENST00000568329	OR52A1	Q9UKL2	312 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	FBXL3	Q9UKT7	428 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	GTF2A1L	Q9UNN4	478 aa		13.49	□□□□□ -0.25
CSK-211	ENST00000568329	CACNA1C	Q13936	2221 aa		13.48	□□□□□ -0.25
CSK-211	ENST00000568329	OR6C6	A6NF89	314 aa		13.48	□□□□□ -0.25
CSK-211	ENST00000568329	ZNF879	B4DU55	563 aa		13.48	□□□□□ -0.25
CSK-211	ENST00000568329	IL18BP	O95998	194 aa		13.48	□□□□□ -0.25
CSK-211	ENST00000568329	PNP	P00491	289 aa		13.48	□□□□□ -0.25
CSK-211	ENST00000568329	COX5B	P10606	129 aa		13.48	□□□□□ -0.25
CSK-211	ENST00000568329	COX5A	P20674	150 aa		13.48	□□□□□ -0.25
CSK-211	ENST00000568329	OTX1	P32242	354 aa	Predicted RBP	13.48	□□□□□ -0.25
CSK-211	ENST00000568329	SOX6	P35712	828 aa		13.48	□□□□□ -0.25
CSK-211	ENST00000568329	CA7	P43166	264 aa		13.48	□□□□□ -0.25
CSK-211	ENST00000568329	P2RY6	Q15077	328 aa		13.48	□□□□□ -0.25
CSK-211	ENST00000568329		Q499Y3	187 aa		13.48	□□□□□ -0.25
CSK-211	ENST00000568329	SOWAHC	Q53LP3	525 aa	Predicted RBP	13.48	□□□□□ -0.25
CSK-211	ENST00000568329	ZMAT1	Q5H9K5	638 aa		13.48	□□□□□ -0.25
CSK-211	ENST00000568329	TMEM53	Q6P2H8	277 aa		13.48	□□□□□ -0.25
CSK-211	ENST00000568329	VWA1	Q6PCB0	445 aa		13.48	□□□□□ -0.25
CSK-211	ENST00000568329	BEND4	Q6ZU67	534 aa		13.48	□□□□□ -0.25
CSK-211	ENST00000568329	CEACAM19	Q7Z692	300 aa		13.48	□□□□□ -0.25
CSK-211	ENST00000568329	NAXE	Q8NCW5	288 aa		13.48	□□□□□ -0.25
CSK-211	ENST00000568329	IL17RD	Q8NFM7	739 aa		13.48	□□□□□ -0.25
CSK-211	ENST00000568329	OR1F12	Q8NHA8	337 aa		13.48	□□□□□ -0.25
CSK-211	ENST00000568329	STARD4	Q96DR4	205 aa		13.48	□□□□□ -0.25
CSK-211	ENST00000568329	CCDC59	Q9P031	241 aa	Known RBP	13.48	□□□□□ -0.25
CSK-211	ENST00000568329	ZGRF1	Q86YA3	2104 aa		13.47	□□□□□ -0.25
CSK-211	ENST00000568329		E9PLN8	166 aa		13.47	□□□□□ -0.25
CSK-211	ENST00000568329	SYNGR3	O43761	229 aa		13.47	□□□□□ -0.25
CSK-211	ENST00000568329	RAF1	P04049	648 aa		13.47	□□□□□ -0.25
CSK-211	ENST00000568329	MMP7	P09237	267 aa	Predicted RBP	13.47	□□□□□ -0.25
CSK-211	ENST00000568329	MYL9	P24844	172 aa		13.47	□□□□□ -0.25
CSK-211	ENST00000568329	OPRM1	P35372	400 aa		13.47	□□□□□ -0.25
CSK-211	ENST00000568329	KIR3DL2	P43630	455 aa		13.47	□□□□□ -0.25
CSK-211	ENST00000568329	CX3CR1	P49238	355 aa		13.47	□□□□□ -0.25
CSK-211	ENST00000568329	MTNR1B	P49286	362 aa		13.47	□□□□□ -0.25
CSK-211	ENST00000568329	RPS11	P62280	158 aa	Known RBP eCLIP	13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms