RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 DUX4L4P0CJ87 422 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 DUX4L5P0CJ88 424 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 DUX4L6P0CJ89 424 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 DUX4L7P0CJ90 424 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 AKR1C4P17516 323 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 DCAF7P61962 342 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 RPS27AP62979 156 aaKnown RBP12.75□□□□□ -0.37
CDH1-209ENST00000566510 UBA52P62987 128 aaKnown RBP12.75□□□□□ -0.37
CDH1-209ENST00000566510 GRINAQ7Z429 371 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 NUDCD2Q8WVJ2 157 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 NPAS1Q99742 590 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 SLC25A32Q9H2D1 315 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 C8orf33Q9H7E9 229 aaPredicted RBP12.75□□□□□ -0.37
CDH1-209ENST00000566510 CNTD2Q9H8S5 307 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 MED29Q9NX70 200 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 DUX4Q9UBX2 424 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 NPIPA1Q9UND3 350 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 VSIG4Q9Y279 399 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 SPAG17Q6Q759 2223 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 RHPN2P1A8MT19 583 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 CTRB1P17538 263 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 AVPR2P30518 371 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 DLSTP36957 453 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 ATP1B3P54709 279 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 SLC26A5P58743 744 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 IL13RA1P78552 427 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 ZNF273Q14593 569 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 TOMM20Q15388 145 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 CTRB2Q6GPI1 263 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 C11orf87Q6NUJ2 197 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 ZDHHC12Q96GR4 267 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 ARL5BQ96KC2 179 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 G6PC2Q9NQR9 355 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 GLS2Q9UI32 602 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 GDF2Q9UK05 429 aaPredicted RBP12.74□□□□□ -0.37
CDH1-209ENST00000566510 VDAC3Q9Y277 283 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 ARID1AO14497 2285 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 IGHV3-20A0A0C4DH32 117 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 TTLL8A6PVC2 850 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 NPIPB7O75200 414 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 FSTP19883 344 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 FBLP22087 321 aaKnown RBP12.74□□□□□ -0.37
CDH1-209ENST00000566510 POU3F1Q03052 451 aaPredicted RBP12.74□□□□□ -0.37
CDH1-209ENST00000566510 PPP1R1AQ13522 171 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 TFAP2EQ6VUC0 442 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 LANCL3Q6ZV70 420 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 FBXW5Q969U6 566 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 CST11Q9H112 138 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 LDAHQ9H6V9 325 aa12.74□□□□□ -0.37
CDH1-209ENST00000566510 ABCA7Q8IZY2 2146 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 IGKV3D-11A0A0A0MRZ8 115 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 EEF1E1-BLOC1S5C9J1V9 151 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 OR2T1O43869 369 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 JMJD6Q6NYC1 403 aaPredicted RBP12.73□□□□□ -0.37
CDH1-209ENST00000566510 FAM122CQ6P4D5 195 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 ZNF704Q6ZNC4 412 aaPredicted RBP12.73□□□□□ -0.37
CDH1-209ENST00000566510 OR52N4Q8NGI2 321 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 ASB13Q8WXK3 278 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 C5orf34Q96MH7 638 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 PRRT1Q99946 306 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 MICU1Q9BPX6 476 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 EMC6Q9BV81 110 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 ZNF304Q9HCX3 659 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 IFT46Q9NQC8 304 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 RTTNQ86VV8 2226 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 MED12Q93074 2177 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 IGKV1D-43A0A0B4J1Z2 117 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 C13orf42A0A1B0GVH6 325 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 A0A1W2PQD3 144 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 MELTFP08582 738 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 GNB3P16520 340 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 OR1D5P58170 312 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 SMAD2Q15796 467 aaKnown RBP12.73□□□□□ -0.37
CDH1-209ENST00000566510 TMEM244Q5VVB8 128 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 UNQ6126/PRO20091Q6UXV3 157 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 SLC26A10Q8NG04 563 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 PTGES2Q9H7Z7 377 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 GPR27Q9NS67 375 aa12.73□□□□□ -0.37
CDH1-209ENST00000566510 LILRA5A6NI73 299 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 F5H0A9 414 aaPredicted RBP12.72□□□□□ -0.37
CDH1-209ENST00000566510 H3BML4 177 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 TOR1AO14656 332 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 STK17BO94768 372 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 CD8AP01732 235 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 CD74P04233 296 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 IFNA6P05013 189 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 HRH1P35367 487 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 PRKXP51817 358 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 PNLIPRP2P54317 469 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 MEF2DQ14814 521 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 COMMD2Q86X83 199 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 WDFY1Q8IWB7 410 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 KCNRGQ8N5I3 272 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 TMEM185AQ8NFB2 350 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 OR1N1Q8NGS0 311 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 OR1L3Q8NH93 324 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 THAP6Q8TBB0 222 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 PHF3Q92576 2039 aaKnown RBP12.72□□□□□ -0.37
CDH1-209ENST00000566510 EDAQ92838 391 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 LRRC46Q96FV0 321 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms