RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 AVPP01185 164 aa16.79■□□□□ 0.28
CLN6-206ENST00000565471 IGHV2-70P01814 119 aa16.79■□□□□ 0.28
CLN6-206ENST00000565471 DBHP09172 617 aa16.79■□□□□ 0.28
CLN6-206ENST00000565471 CENPAP49450 140 aa16.79■□□□□ 0.28
CLN6-206ENST00000565471 DCAF12L2Q5VW00 463 aa16.79■□□□□ 0.28
CLN6-206ENST00000565471 C1orf94Q6P1W5 598 aa16.79■□□□□ 0.28
CLN6-206ENST00000565471 LEG1Q6P5S2 330 aa16.79■□□□□ 0.28
CLN6-206ENST00000565471 C16orf89Q6UX73 402 aa16.79■□□□□ 0.28
CLN6-206ENST00000565471 FBXW12Q6X9E4 464 aa16.79■□□□□ 0.28
CLN6-206ENST00000565471 C1QL2Q7Z5L3 287 aa16.79■□□□□ 0.28
CLN6-206ENST00000565471 OR6V1Q8N148 313 aa16.79■□□□□ 0.28
CLN6-206ENST00000565471 SEMA6DQ8NFY4 1073 aa16.79■□□□□ 0.28
CLN6-206ENST00000565471 APOBEC3DQ96AK3 386 aaPredicted RBP16.79■□□□□ 0.28
CLN6-206ENST00000565471 NMNAT3Q96T66 252 aa16.79■□□□□ 0.28
CLN6-206ENST00000565471 ARL8BQ9NVJ2 186 aa16.79■□□□□ 0.28
CLN6-206ENST00000565471 TMCC3Q9ULS5 477 aa16.79■□□□□ 0.28
CLN6-206ENST00000565471 DYSFO75923 2080 aa16.78■□□□□ 0.28
CLN6-206ENST00000565471 LOC105371242A0A075B767 164 aa16.78■□□□□ 0.28
CLN6-206ENST00000565471 IDH3BO43837 385 aa16.78■□□□□ 0.28
CLN6-206ENST00000565471 GPANK1O95872 356 aa16.78■□□□□ 0.28
CLN6-206ENST00000565471 HIST1H1CP16403 213 aaKnown RBP16.78■□□□□ 0.28
CLN6-206ENST00000565471 RRM2P31350 389 aa16.78■□□□□ 0.28
CLN6-206ENST00000565471 MSX2P35548 267 aaPredicted RBP16.78■□□□□ 0.28
CLN6-206ENST00000565471 GSSP48637 474 aa16.78■□□□□ 0.28
CLN6-206ENST00000565471 ERFP50548 548 aa16.78■□□□□ 0.28
CLN6-206ENST00000565471 MEP1BQ16820 701 aa16.78■□□□□ 0.28
CLN6-206ENST00000565471 PIGWQ7Z7B1 504 aa16.78■□□□□ 0.28
CLN6-206ENST00000565471 ZBTB46Q86UZ6 589 aa16.78■□□□□ 0.28
CLN6-206ENST00000565471 SLC26A10Q8NG04 563 aa16.78■□□□□ 0.28
CLN6-206ENST00000565471 ST7LQ8TDW4 575 aa16.78■□□□□ 0.28
CLN6-206ENST00000565471 ZNF418Q8TF45 676 aaPredicted RBP16.78■□□□□ 0.28
CLN6-206ENST00000565471 IFT27Q9BW83 186 aa16.78■□□□□ 0.28
CLN6-206ENST00000565471 DCAF16Q9NXF7 216 aa16.78■□□□□ 0.28
CLN6-206ENST00000565471 UBAP1Q9NZ09 502 aa16.78■□□□□ 0.28
CLN6-206ENST00000565471 PPIAL4EA0A075B759 164 aa16.77■□□□□ 0.28
CLN6-206ENST00000565471 PPIAL4CA0A0B4J2A2 164 aa16.77■□□□□ 0.28
CLN6-206ENST00000565471 PPIAL4DF5H284 164 aa16.77■□□□□ 0.28
CLN6-206ENST00000565471 FOXH1O75593 365 aa16.77■□□□□ 0.28
CLN6-206ENST00000565471 DCTN3O75935 186 aa16.77■□□□□ 0.28
CLN6-206ENST00000565471 VENTXO95231 258 aa16.77■□□□□ 0.28
CLN6-206ENST00000565471 PPIAL4FP0DN26 164 aa16.77■□□□□ 0.28
CLN6-206ENST00000565471 EPHA1P21709 976 aa16.77■□□□□ 0.28
CLN6-206ENST00000565471 GNGT1P63211 74 aa16.77■□□□□ 0.28
CLN6-206ENST00000565471 TSPAN31Q12999 210 aa16.77■□□□□ 0.28
CLN6-206ENST00000565471 TMEM155Q4W5P6 130 aa16.77■□□□□ 0.28
CLN6-206ENST00000565471 ZNF620Q6ZNG0 422 aa16.77■□□□□ 0.28
CLN6-206ENST00000565471 USP43Q70EL4 1123 aa16.77■□□□□ 0.28
CLN6-206ENST00000565471 SPICQ8N5J4 248 aa16.77■□□□□ 0.28
CLN6-206ENST00000565471 OR4K13Q8NH42 304 aa16.77■□□□□ 0.28
CLN6-206ENST00000565471 GNPDA2Q8TDQ7 276 aa16.77■□□□□ 0.28
CLN6-206ENST00000565471 ITLN1Q8WWA0 313 aa16.77■□□□□ 0.28
CLN6-206ENST00000565471 SRA1Q9HD15 236 aaKnown RBP16.77■□□□□ 0.28
CLN6-206ENST00000565471 PTTG3PQ9NZH4 202 aa16.77■□□□□ 0.28
CLN6-206ENST00000565471 KRT36O76013 467 aa16.76■□□□□ 0.27
CLN6-206ENST00000565471 SBK2P0C263 348 aa16.76■□□□□ 0.27
CLN6-206ENST00000565471 NOS3P29474 1203 aa16.76■□□□□ 0.27
CLN6-206ENST00000565471 BTG1P62324 171 aa16.76■□□□□ 0.27
CLN6-206ENST00000565471 HLXQ14774 488 aaPredicted RBP16.76■□□□□ 0.27
CLN6-206ENST00000565471 KRTAP27-1Q3LI81 207 aa16.76■□□□□ 0.27
CLN6-206ENST00000565471 SLC36A3Q495N2 470 aa16.76■□□□□ 0.27
CLN6-206ENST00000565471 SLC27A4Q6P1M0 643 aa16.76■□□□□ 0.27
CLN6-206ENST00000565471 PGBD2Q6P3X8 592 aa16.76■□□□□ 0.27
CLN6-206ENST00000565471 COLCA1Q6ZS62 124 aa16.76■□□□□ 0.27
CLN6-206ENST00000565471 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.76■□□□□ 0.27
CLN6-206ENST00000565471 LRRC28Q86X40 367 aaPredicted RBP16.76■□□□□ 0.27
CLN6-206ENST00000565471 ZDHHC21Q8IVQ6 265 aa16.76■□□□□ 0.27
CLN6-206ENST00000565471 DEFB107AQ8IZN7 70 aa16.76■□□□□ 0.27
CLN6-206ENST00000565471 KLHL36Q8N4N3 616 aa16.76■□□□□ 0.27
CLN6-206ENST00000565471 OR8G5Q8NG78 346 aa16.76■□□□□ 0.27
CLN6-206ENST00000565471 NANPQ8TBE9 248 aa16.76■□□□□ 0.27
CLN6-206ENST00000565471 OR2V2Q96R30 315 aa16.76■□□□□ 0.27
CLN6-206ENST00000565471 SIGLEC11Q96RL6 698 aa16.76■□□□□ 0.27
CLN6-206ENST00000565471 RPRD1BQ9NQG5 326 aaKnown RBP16.76■□□□□ 0.27
CLN6-206ENST00000565471 PCDHB10Q9UN67 800 aa16.76■□□□□ 0.27
CLN6-206ENST00000565471 PPP1R3CQ9UQK1 317 aa16.76■□□□□ 0.27
CLN6-206ENST00000565471 OR6C68A6NDL8 312 aa16.75■□□□□ 0.27
CLN6-206ENST00000565471 IFNL4K9M1U5 179 aa16.75■□□□□ 0.27
CLN6-206ENST00000565471 HMGA2P52926 109 aa16.75■□□□□ 0.27
CLN6-206ENST00000565471 HILS1P60008 231 aa16.75■□□□□ 0.27
CLN6-206ENST00000565471 LCN2P80188 198 aa16.75■□□□□ 0.27
CLN6-206ENST00000565471 ECH1Q13011 328 aa16.75■□□□□ 0.27
CLN6-206ENST00000565471 SLC18B1Q6NT16 456 aa16.75■□□□□ 0.27
CLN6-206ENST00000565471 RPL13AP3Q6NVV1 102 aa16.75■□□□□ 0.27
CLN6-206ENST00000565471 CORO6Q6QEF8 472 aa16.75■□□□□ 0.27
CLN6-206ENST00000565471 ZNF771Q7L3S4 317 aaPredicted RBP16.75■□□□□ 0.27
CLN6-206ENST00000565471 OR5AS1Q8N127 324 aa16.75■□□□□ 0.27
CLN6-206ENST00000565471 LINC00471Q8N535 108 aa16.75■□□□□ 0.27
CLN6-206ENST00000565471 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.75■□□□□ 0.27
CLN6-206ENST00000565471 OR13G1Q8NGZ3 307 aa16.75■□□□□ 0.27
CLN6-206ENST00000565471 ZNF582Q96NG8 517 aaPredicted RBP16.75■□□□□ 0.27
CLN6-206ENST00000565471 C7orf69Q9H7B7 122 aa16.75■□□□□ 0.27
CLN6-206ENST00000565471 PATZ1Q9HBE1 687 aaKnown RBP16.75■□□□□ 0.27
CLN6-206ENST00000565471 POLR3KQ9Y2Y1 108 aaPredicted RBP16.75■□□□□ 0.27
CLN6-206ENST00000565471 WNK2Q9Y3S1 2297 aa16.75■□□□□ 0.27
CLN6-206ENST00000565471 IQCF6A8MYZ5 107 aa16.74■□□□□ 0.27
CLN6-206ENST00000565471 MNAT1P51948 309 aa16.74■□□□□ 0.27
CLN6-206ENST00000565471 MXRA7P84157 204 aa16.74■□□□□ 0.27
CLN6-206ENST00000565471 HNRNPA0Q13151 305 aaKnown RBP16.74■□□□□ 0.27
CLN6-206ENST00000565471 ZMYND11Q15326 602 aa16.74■□□□□ 0.27
CLN6-206ENST00000565471 RSPO1Q2MKA7 263 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms