RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 WDR76Q9H967 626 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 DDX28Q9NUL7 540 aaKnown RBP5.42□□□□□ -1.54
TCF4-228ENST00000565393 TMEM100Q9NV29 134 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 DCAF16Q9NXF7 216 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 VSX1Q9NZR4 365 aaPredicted RBP5.42□□□□□ -1.54
TCF4-228ENST00000565393 IL19Q9UHD0 177 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 B9D1Q9UPM9 204 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 N6AMT1Q9Y5N5 214 aa5.42□□□□□ -1.54
TCF4-228ENST00000565393 LRRC30A6NM36 301 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 H0YL77 283 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 TMEM178BH3BS89 294 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 DCTN6O00399 190 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 ATP8B1O43520 1251 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 TXNDC12O95881 172 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 IGHV2-70P01814 119 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 LCATP04180 440 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 FABP3P05413 133 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 IRF2P14316 349 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 HIST1H1CP16403 213 aaKnown RBP5.41□□□□□ -1.54
TCF4-228ENST00000565393 SELEP16581 610 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 FPR3P25089 353 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 RRM2P31350 389 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 SLC6A9P48067 706 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 SRP9P49458 86 aaKnown RBP5.41□□□□□ -1.54
TCF4-228ENST00000565393 ERFP50548 548 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 DBPQ10586 325 aaPredicted RBP5.41□□□□□ -1.54
TCF4-228ENST00000565393 MALLQ13021 153 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 SAMD4BQ5PRF9 694 aaKnown RBP5.41□□□□□ -1.54
TCF4-228ENST00000565393 PGM2L1Q6PCE3 622 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 C1QL2Q7Z5L3 287 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 NAA40Q86UY6 237 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 LINC00346Q8IVM7 164 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 SPICQ8N5J4 248 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 ZNF283Q8N7M2 679 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 BHLHE23Q8NDY6 225 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 ZNF420Q8TAQ5 688 aaPredicted RBP5.41□□□□□ -1.54
TCF4-228ENST00000565393 ZFAND2BQ8WV99 257 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 SPRYD4Q8WW59 207 aaPredicted RBP5.41□□□□□ -1.54
TCF4-228ENST00000565393 SLCO4A1Q96BD0 722 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 NSMCE2Q96MF7 247 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 OR2V2Q96R30 315 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 GPX7Q96SL4 187 aaPredicted RBP5.41□□□□□ -1.54
TCF4-228ENST00000565393 SLC6A7Q99884 636 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 MRI1Q9BV20 369 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 HDHD2Q9H0R4 259 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 OR52D1Q9H346 318 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 NTN4Q9HB63 628 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 PATZ1Q9HBE1 687 aaKnown RBP5.41□□□□□ -1.54
TCF4-228ENST00000565393 RPRD1BQ9NQG5 326 aaKnown RBP5.41□□□□□ -1.54
TCF4-228ENST00000565393 MMP26Q9NRE1 261 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 ABCD2Q9UBJ2 740 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 TAGLN3Q9UI15 199 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 MAGEL2Q9UJ55 1249 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 AUP1Q9Y679 476 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 ZNF469Q96JG9 3925 aaPredicted RBP5.41□□□□□ -1.54
TCF4-228ENST00000565393 CR1P17927 2039 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 CHD3Q12873 2000 aaKnown RBP5.41□□□□□ -1.54
TCF4-228ENST00000565393 ZFHX3Q15911 3703 aa5.41□□□□□ -1.54
TCF4-228ENST00000565393 CSPG4Q6UVK1 2322 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 PPIAL4EA0A075B759 164 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 PPIAL4DF5H284 164 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 F5H5P2 479 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 TRAPPC2LH3BP13 241 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 IFNL4K9M1U5 179 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 TNFRSF11BO00300 401 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 ARPC3O15145 178 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 IDH3BO43837 385 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 SNX3O60493 162 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 KRT36O76013 467 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 CYB5R3P00387 301 aaPredicted RBP5.4□□□□□ -1.54
TCF4-228ENST00000565393 GASTP01350 101 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 HLA-DPB1P04440 258 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 WNT2P09544 360 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 PPIAL4FP0DN26 164 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 CFPP27918 469 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 GGT2P36268 569 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 MDH2P40926 338 aaKnown RBP5.4□□□□□ -1.54
TCF4-228ENST00000565393 RAD23AP54725 363 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 GYS2P54840 703 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 TPTEP56180 551 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 PRSS12P56730 875 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 FXYD6P3P58550 94 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 HILS1P60008 231 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 SEC61A1P61619 476 aaKnown RBP5.4□□□□□ -1.54
TCF4-228ENST00000565393 BTG1P62324 171 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 GNGT1P63211 74 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 HIST1H3AP68431 136 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 ECH1Q13011 328 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 ZNF154Q13106 437 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 ZMYND11Q15326 602 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 TAF13Q15543 124 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 RSPO1Q2MKA7 263 aaPredicted RBP5.4□□□□□ -1.54
TCF4-228ENST00000565393 TMEM155Q4W5P6 130 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 ESCO2Q56NI9 601 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 ARMCX4Q5H9R4 360 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 CLEC12AQ5QGZ9 265 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 HIST2H3PS2Q5TEC6 136 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 C16orf89Q6UX73 402 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 BTNL3Q6UXE8 466 aa5.4□□□□□ -1.54
TCF4-228ENST00000565393 CYP2R1Q6VVX0 501 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms