RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 FAM47DPA6NHR8 397 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 NUPL2O15504 423 aaKnown RBP1.98□□□□□ -2.09
PALB2-203ENST00000565038 SERPINA3P01011 423 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 SERPINA5P05154 406 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 EIF4EP06730 217 aaKnown RBP1.98□□□□□ -2.09
PALB2-203ENST00000565038 CRYGBP07316 175 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 ZNF688P0C7X2 276 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 CHMLP26374 656 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 DCKP27707 260 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 CD34P28906 385 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 HCAR3P49019 387 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 CSNK1EP49674 416 aaKnown RBP1.98□□□□□ -2.09
PALB2-203ENST00000565038 VSX2P58304 361 aaPredicted RBP1.98□□□□□ -2.09
PALB2-203ENST00000565038 VPS26BQ4G0F5 336 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 MPV17L2Q567V2 206 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 PRAMEF5Q5TYX0 476 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 PRAMEF6Q5VXH4 476 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 UBE2J2Q8N2K1 259 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 OR10AD1Q8NGE0 317 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 GPR151Q8TDV0 419 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 C17orf50Q8WW18 174 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 HSD17B10Q99714 261 aaKnown RBP1.98□□□□□ -2.09
PALB2-203ENST00000565038 TEKT3Q9BXF9 490 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 ENOPH1Q9UHY7 261 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 STARD10Q9Y365 291 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 KCNE3Q9Y6H6 103 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 CLIP1P30622 1438 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 EEA1Q15075 1411 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 KIF21BO75037 1637 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 FRMPD1Q5SYB0 1578 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 ADAMTSL3P82987 1691 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 MBD5Q9P267 1494 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 CXCL11O14625 94 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 RAB29O14966 203 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 CHST1O43916 411 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 REM1O75628 298 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 PALMO75781 387 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 TSPAN13O95857 204 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 IGKV1D-16P01601 117 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 IL1RNP18510 177 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 GGT1P19440 569 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 NCF2P19878 526 aaPredicted RBP1.97□□□□□ -2.09
PALB2-203ENST00000565038 RAB3AP20336 220 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 TMED10P49755 219 aaKnown RBP1.97□□□□□ -2.09
PALB2-203ENST00000565038 P2RX1P51575 399 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 CCNG1P51959 295 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 TAS2R31P59538 309 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 CRADDP78560 199 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 IGFBP7Q16270 282 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 AVPI1Q5T686 147 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 TBC1D21Q8IYX1 336 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 TMEM256Q8N2U0 113 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 TMEM105Q8N8V8 129 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 SPATA4Q8NEY3 305 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 NT5C3BQ969T7 300 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 SLC29A1Q99808 456 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 C1orf198Q9H425 327 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 TMEM9BQ9NQ34 198 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 SAMSN1Q9NSI8 373 aaKnown RBP1.97□□□□□ -2.09
PALB2-203ENST00000565038 PSMC3IPQ9P2W1 217 aaPredicted RBP1.97□□□□□ -2.09
PALB2-203ENST00000565038 PISDQ9UG56 409 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 VANGL2Q9ULK5 521 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 PTPRKQ15262 1439 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 CASKIN1Q8WXD9 1431 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 MIA2Q96PC5 1412 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 MTUS2Q5JR59 1369 aa1.97□□□□□ -2.09
PALB2-203ENST00000565038 PLEKHH2Q8IVE3 1493 aa1.96□□□□□ -2.1
PALB2-203ENST00000565038 MLH3Q9UHC1 1453 aa1.96□□□□□ -2.1
PALB2-203ENST00000565038 AHDC1Q5TGY3 1603 aaPredicted RBP1.96□□□□□ -2.1
PALB2-203ENST00000565038 RAPGEF6Q8TEU7 1601 aa1.96□□□□□ -2.1
PALB2-203ENST00000565038 MADDQ8WXG6 1647 aa1.96□□□□□ -2.1
PALB2-203ENST00000565038 TRAV19A0A0A6YYK7 116 aa1.96□□□□□ -2.1
PALB2-203ENST00000565038 LRRIQ3A6PVS8 624 aaPredicted RBP1.96□□□□□ -2.1
PALB2-203ENST00000565038 DNASE2O00115 360 aaPredicted RBP1.96□□□□□ -2.1
PALB2-203ENST00000565038 POLR1CO15160 346 aaPredicted RBP1.96□□□□□ -2.1
PALB2-203ENST00000565038 ANXA5P08758 320 aa1.96□□□□□ -2.1
PALB2-203ENST00000565038 ACSM4P0C7M7 580 aa1.96□□□□□ -2.1
PALB2-203ENST00000565038 PABPC4LP0CB38 370 aaKnown RBP1.96□□□□□ -2.1
PALB2-203ENST00000565038 TNNI1P19237 187 aa1.96□□□□□ -2.1
PALB2-203ENST00000565038 PPP1CBP62140 327 aa1.96□□□□□ -2.1
PALB2-203ENST00000565038 ADARB1P78563 741 aaKnown RBP1.96□□□□□ -2.1
PALB2-203ENST00000565038 HMGN5P82970 282 aaKnown RBP1.96□□□□□ -2.1
PALB2-203ENST00000565038 CDK5Q00535 292 aa1.96□□□□□ -2.1
PALB2-203ENST00000565038 OR7A5Q15622 319 aa1.96□□□□□ -2.1
PALB2-203ENST00000565038 RNASEKQ6P5S7 137 aaKnown RBP1.96□□□□□ -2.1
PALB2-203ENST00000565038 SASS6Q6UVJ0 657 aa1.96□□□□□ -2.1
PALB2-203ENST00000565038 ZNF547Q8IVP9 402 aa1.96□□□□□ -2.1
PALB2-203ENST00000565038 PRELID2Q8N945 189 aa1.96□□□□□ -2.1
PALB2-203ENST00000565038 OR2A1Q8NGT9 310 aa1.96□□□□□ -2.1
PALB2-203ENST00000565038 KIFAP3Q92845 792 aa1.96□□□□□ -2.1
PALB2-203ENST00000565038 MICU1Q9BPX6 476 aa1.96□□□□□ -2.1
PALB2-203ENST00000565038 ZNF229Q9UJW7 825 aa1.96□□□□□ -2.1
PALB2-203ENST00000565038 C9orf84Q5VXU9 1444 aa1.96□□□□□ -2.1
PALB2-203ENST00000565038 FMN1Q68DA7 1419 aa1.96□□□□□ -2.1
PALB2-203ENST00000565038 SAMD9Q5K651 1589 aa1.96□□□□□ -2.1
PALB2-203ENST00000565038 TTC37Q6PGP7 1564 aa1.96□□□□□ -2.1
PALB2-203ENST00000565038 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
PALB2-203ENST00000565038 ARHGAP5Q13017 1502 aa1.96□□□□□ -2.1
PALB2-203ENST00000565038 ZFYVE16Q7Z3T8 1539 aa1.96□□□□□ -2.1
PALB2-203ENST00000565038 KIF14Q15058 1648 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms