RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 C9JQL5 133 aa18.4■□□□□ 0.54
MAP1LC3B-206ENST00000564844 P2RY10O00398 339 aa18.4■□□□□ 0.54
MAP1LC3B-206ENST00000564844 CD2P06729 351 aa18.4■□□□□ 0.54
MAP1LC3B-206ENST00000564844 FABP1P07148 127 aa18.4■□□□□ 0.54
MAP1LC3B-206ENST00000564844 SLC35E2P0CK97 266 aa18.4■□□□□ 0.54
MAP1LC3B-206ENST00000564844 VEGFBP49765 207 aa18.4■□□□□ 0.54
MAP1LC3B-206ENST00000564844 EBPQ15125 230 aaKnown RBP18.4■□□□□ 0.54
MAP1LC3B-206ENST00000564844 VWA2Q5GFL6 755 aa18.4■□□□□ 0.54
MAP1LC3B-206ENST00000564844 TMEM184AQ6ZMB5 413 aa18.4■□□□□ 0.54
MAP1LC3B-206ENST00000564844 GALNTL5Q7Z4T8 443 aa18.4■□□□□ 0.54
MAP1LC3B-206ENST00000564844 YAF2Q8IY57 180 aa18.4■□□□□ 0.54
MAP1LC3B-206ENST00000564844 AVL9Q8NBF6 648 aa18.4■□□□□ 0.54
MAP1LC3B-206ENST00000564844 SLC22A18Q96BI1 424 aa18.4■□□□□ 0.54
MAP1LC3B-206ENST00000564844 GAL3ST4Q96RP7 486 aa18.4■□□□□ 0.54
MAP1LC3B-206ENST00000564844 RHOFQ9HBH0 211 aa18.4■□□□□ 0.54
MAP1LC3B-206ENST00000564844 ASXL3Q9C0F0 2248 aa18.39■□□□□ 0.54
MAP1LC3B-206ENST00000564844 FAM109BQ6ICB4 259 aaPredicted RBP18.39■□□□□ 0.54
MAP1LC3B-206ENST00000564844 MAFIPQ8WZ33 124 aa18.39■□□□□ 0.54
MAP1LC3B-206ENST00000564844 TCEAL2Q9H3H9 227 aaPredicted RBP18.39■□□□□ 0.54
MAP1LC3B-206ENST00000564844 HTR3BO95264 441 aa18.39■□□□□ 0.53
MAP1LC3B-206ENST00000564844 CTLA4P16410 223 aa18.39■□□□□ 0.53
MAP1LC3B-206ENST00000564844 SMCO1Q147U7 214 aa18.39■□□□□ 0.53
MAP1LC3B-206ENST00000564844 KRBOX4Q5JUW0 171 aa18.39■□□□□ 0.53
MAP1LC3B-206ENST00000564844 DHRS7BQ6IAN0 325 aaPredicted RBP18.39■□□□□ 0.53
MAP1LC3B-206ENST00000564844 COX15Q7KZN9 410 aa18.39■□□□□ 0.53
MAP1LC3B-206ENST00000564844 LYRM4Q9HD34 91 aa18.39■□□□□ 0.53
MAP1LC3B-206ENST00000564844 RAB19A4D1S5 217 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 HCRTR2O43614 444 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 CELA2BP08218 269 aaPredicted RBP18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 F2RL1P55085 397 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 POLR2GP62487 172 aaKnown RBP eCLIP18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 ZNF345Q14585 488 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 PTCRAQ6ISU1 281 aaPredicted RBP18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 NAA40Q86UY6 237 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 LRRC75AQ8NAA5 344 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 RNF141Q8WVD5 230 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 NAA11Q9BSU3 229 aaPredicted RBP18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 NUDT9Q9BW91 350 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 PTGES2Q9H7Z7 377 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 FN3KRPQ9HA64 309 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 FGF19O95750 216 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 H2AFB1P0C5Y9 115 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 SLC25A4P12235 298 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 AKR1E2Q96JD6 320 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 OR8B4Q96RC9 309 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 RNF126Q9BV68 326 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 PLA2G2FQ9BZM2 168 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 RPS10P5Q9NQ39 176 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 HEBP2Q9Y5Z4 205 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 LRP3O75074 770 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 TIMP1P01033 207 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 CRHP06850 196 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 SFTA3P0C7M3 94 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 LRFN5Q96NI6 719 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 DGAT2Q96PD7 388 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 ABHD6Q9BV23 337 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 OR10A5Q9H207 317 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 MRPL22Q9NWU5 206 aaKnown RBP18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 LRP12Q9Y561 859 aa18.38■□□□□ 0.53
MAP1LC3B-206ENST00000564844 EFCAB7A8K855 629 aa18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 MED6O75586 246 aa18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 SNRNP70P08621 437 aaKnown RBP18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 HOXB5P09067 269 aa18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 CPT2P23786 658 aa18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 SLC25A1P53007 311 aa18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 KIR2DS3Q14952 304 aa18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 SGCAQ16586 387 aa18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 EEF1A1P5Q5VTE0 462 aa18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 ZNF813Q6ZN06 617 aa18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 TMPRSS9Q7Z410 1059 aa18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 ADGRE4PQ86SQ3 457 aa18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 SLC25A42Q86VD7 318 aa18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 FGGYQ96C11 551 aa18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 NICN1Q9BSH3 213 aa18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 YBX2Q9Y2T7 364 aaKnown RBP18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 FRYLO94915 3013 aa18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 ZNF432O94892 652 aa18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 RORAP35398 523 aa18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 FMODQ06828 376 aa18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 ACKR1Q16570 336 aa18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 UQCC3Q6UW78 93 aa18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 ATG4DQ86TL0 474 aaPredicted RBP18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 RSC1A1Q92681 617 aa18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 ASB16Q96NS5 453 aa18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 OR11A1Q9GZK7 315 aa18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 CNTD2Q9H8S5 307 aa18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 PNO1Q9NRX1 252 aaKnown RBP18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 COA3Q9Y2R0 106 aaPredicted RBP18.37■□□□□ 0.53
MAP1LC3B-206ENST00000564844 GPR89AB7ZAQ6 455 aa18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 EFSO43281 561 aa18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 S100A9P06702 114 aaKnown RBP18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 GPR89BP0CG08 455 aa18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 HABP2Q14520 560 aaPredicted RBP18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 ZNF141Q15928 474 aa18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 WBP2NLQ6ICG8 309 aa18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 ZNF679Q8IYX0 411 aa18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 GPR119Q8TDV5 335 aa18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 MITD1Q8WV92 249 aa18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 GAS2L1Q99501 681 aaPredicted RBP18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 OR8D2Q9GZM6 311 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms