RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 WNT5AP41221 380 aa10.78□□□□□ -0.68
KARS-204ENST00000564578 HTR5AP47898 357 aa10.78□□□□□ -0.68
KARS-204ENST00000564578 ZNF91Q05481 1191 aa10.78□□□□□ -0.68
KARS-204ENST00000564578 EIF2B1Q14232 305 aaKnown RBP10.78□□□□□ -0.68
KARS-204ENST00000564578 SNCBQ16143 134 aa10.78□□□□□ -0.68
KARS-204ENST00000564578 SLC22A25Q6T423 547 aa10.78□□□□□ -0.68
KARS-204ENST00000564578 ZNF704Q6ZNC4 412 aaPredicted RBP10.78□□□□□ -0.68
KARS-204ENST00000564578 ZNF101Q8IZC7 436 aa10.78□□□□□ -0.68
KARS-204ENST00000564578 OR4F15Q8NGB8 312 aa10.78□□□□□ -0.68
KARS-204ENST00000564578 RNF133Q8WVZ7 376 aa10.78□□□□□ -0.68
KARS-204ENST00000564578 SLAMF6Q96DU3 332 aa10.78□□□□□ -0.68
KARS-204ENST00000564578 RADILQ96JH8 1075 aa10.78□□□□□ -0.68
KARS-204ENST00000564578 CNN2Q99439 309 aaKnown RBP10.78□□□□□ -0.68
KARS-204ENST00000564578 ANKRD60Q9BZ19 345 aa10.78□□□□□ -0.68
KARS-204ENST00000564578 HDHD2Q9H0R4 259 aa10.78□□□□□ -0.68
KARS-204ENST00000564578 ATPIF1Q9UII2 106 aa10.78□□□□□ -0.68
KARS-204ENST00000564578 CCNOP22674 350 aa10.77□□□□□ -0.69
KARS-204ENST00000564578 SSTR2P30874 369 aa10.77□□□□□ -0.69
KARS-204ENST00000564578 OTX1P32242 354 aaPredicted RBP10.77□□□□□ -0.69
KARS-204ENST00000564578 APLNRP35414 380 aa10.77□□□□□ -0.69
KARS-204ENST00000564578 NKX6-1P78426 367 aaPredicted RBP10.77□□□□□ -0.69
KARS-204ENST00000564578 RHOUQ7L0Q8 258 aa10.77□□□□□ -0.69
KARS-204ENST00000564578 THAP5Q7Z6K1 395 aa10.77□□□□□ -0.69
KARS-204ENST00000564578 Q96MT0 163 aa10.77□□□□□ -0.69
KARS-204ENST00000564578 ZNF184Q99676 751 aaPredicted RBP10.77□□□□□ -0.69
KARS-204ENST00000564578 ATF6BQ99941 703 aa10.77□□□□□ -0.69
KARS-204ENST00000564578 TMEM165Q9HC07 324 aa10.77□□□□□ -0.69
KARS-204ENST00000564578 MRPS18AQ9NVS2 196 aaKnown RBP10.77□□□□□ -0.69
KARS-204ENST00000564578 PCDHGB5Q9Y5G0 923 aa10.77□□□□□ -0.69
KARS-204ENST00000564578 E7EQL1 145 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 ICMTO60725 284 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 LYNP07948 512 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 NR4A1P22736 598 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 ANOS1P23352 680 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 SLC15A1P46059 708 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 HSPA13P48723 471 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 GDI2P50395 445 aaKnown RBP10.76□□□□□ -0.69
KARS-204ENST00000564578 TBC1D28Q2M2D7 210 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 ZNF672Q499Z4 452 aaPredicted RBP10.76□□□□□ -0.69
KARS-204ENST00000564578 SPATC1Q76KD6 591 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 SSX6Q7RTT6 188 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 NAA40Q86UY6 237 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 ZNF454Q8N9F8 522 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 THEM6Q8WUY1 208 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 LGALS12Q96DT0 336 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 RNFT2Q96EX2 444 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 COQ7Q99807 217 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 RHNO1Q9BSD3 238 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 NAV2Q8IVL1 2488 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 A0A1W2PQL4 384 aaPredicted RBP10.76□□□□□ -0.69
KARS-204ENST00000564578 NGFP01138 241 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 ADRA2AP08913 450 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 MYF6P23409 242 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 OPRL1P41146 370 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 CXCR4P61073 352 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 POU4F2Q12837 409 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 MSMPQ1L6U9 139 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 KRT80Q6KB66 452 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 TMEM200AQ86VY9 491 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 SLC35F2Q8IXU6 374 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 AKAP1Q92667 903 aaKnown RBP eCLIP10.76□□□□□ -0.69
KARS-204ENST00000564578 CENPMQ9NSP4 180 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 LAMP5Q9UJQ1 280 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 RAB26Q9ULW5 256 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 EXOGQ9Y2C4 368 aaKnown RBP10.76□□□□□ -0.69
KARS-204ENST00000564578 MYRFQ9Y2G1 1151 aa10.76□□□□□ -0.69
KARS-204ENST00000564578 SNTNA6NMZ2 147 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 ZNF878C9JN71 531 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 PSMD9O00233 223 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 MAGEB4O15481 346 aaPredicted RBP10.75□□□□□ -0.69
KARS-204ENST00000564578 GPRIN2O60269 458 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 ACSM4P0C7M7 580 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 OR2T7P0C7T2 308 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 FAM157BP0CG42 384 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 PCSK6P29122 969 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 UCP2P55851 309 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 GALK2Q01415 458 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 ROM1Q03395 351 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 ECH1Q13011 328 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 COLCA1Q6ZS62 124 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 NUP37Q8NFH4 326 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 OR1J2Q8NGS2 313 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 OR2T27Q8NH04 317 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 C4orf45Q96LM5 186 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 TBX5Q99593 518 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 KCNS3Q9BQ31 491 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 ZNF649Q9BS31 505 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 TTTY10Q9BZA0 68 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 LIME1Q9H400 295 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 CDH20Q9HBT6 801 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 CA10Q9NS85 328 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 CISD1Q9NZ45 108 aaKnown RBP10.75□□□□□ -0.69
KARS-204ENST00000564578 RPL36Q9Y3U8 105 aaKnown RBP10.75□□□□□ -0.69
KARS-204ENST00000564578 TMEM14AQ9Y6G1 99 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 PDZD2O15018 2839 aa10.75□□□□□ -0.69
KARS-204ENST00000564578 F5H5K5 113 aa10.74□□□□□ -0.69
KARS-204ENST00000564578 XPNPEP2O43895 674 aa10.74□□□□□ -0.69
KARS-204ENST00000564578 SMPD2O60906 423 aa10.74□□□□□ -0.69
KARS-204ENST00000564578 ATP6V1E1P36543 226 aa10.74□□□□□ -0.69
KARS-204ENST00000564578 ERVS71-1P61550 626 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms