RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 CCDC172P0C7W6 258 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 RAB3BP20337 219 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 RAB4AP20338 218 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 HADHBP55084 474 aaKnown RBP1.75□□□□□ -2.13
CHD9-209ENST00000564255 CLDN6P56747 220 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 ATP6V0D1P61421 351 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 PRPSAP1Q14558 356 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 GABRA6Q16445 453 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 ZNF829Q3KNS6 432 aaPredicted RBP1.75□□□□□ -2.13
CHD9-209ENST00000564255 TPRG1LQ5T0D9 272 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 OR2W3Q7Z3T1 314 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 HORMAD1Q86X24 394 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 VKORC1L1Q8N0U8 176 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 ARRDC1Q8N5I2 433 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 TMEM104Q8NE00 496 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 BLOC1S5Q8TDH9 187 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 SIKE1Q9BRV8 207 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 AGMATQ9BSE5 352 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 CCDC94Q9BW85 323 aaPredicted RBP1.75□□□□□ -2.13
CHD9-209ENST00000564255 KIR3DX1Q9H7L2 352 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 NANOGQ9H9S0 305 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 PCYOX1Q9UHG3 505 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 ZNF318Q5VUA4 2279 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 MAPKBP1O60336 1514 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 ZCCHC6Q5VYS8 1495 aaKnown RBP1.74□□□□□ -2.13
CHD9-209ENST00000564255 ATRXP46100 2492 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 NKX2-6A6NCS4 301 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 KRTAP5-8O75690 187 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 TDP2O95551 362 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 ETHE1O95571 254 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 KLK1P06870 262 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 PNMA6AP0CW24 399 aaPredicted RBP1.74□□□□□ -2.13
CHD9-209ENST00000564255 GFAPP14136 432 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 CD1EP15812 388 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 CSNK2A2P19784 350 aaPredicted RBP1.74□□□□□ -2.13
CHD9-209ENST00000564255 CNR1P21554 472 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 USF1P22415 310 aaPredicted RBP1.74□□□□□ -2.13
CHD9-209ENST00000564255 MAS1LP35410 378 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 CSNK1DP48730 415 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 SERPINB8P50452 374 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 FABP6P51161 128 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 PSMD4P55036 377 aaKnown RBP1.74□□□□□ -2.13
CHD9-209ENST00000564255 HERVK_113P61574 105 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 SLC7A9P82251 487 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 HMGCS1Q01581 520 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 SMARCB1Q12824 385 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 STK38Q15208 465 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 PSG5Q15238 335 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 TSC22D1Q15714 1073 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 STK11Q15831 433 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 ZSCAN26Q16670 478 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 FAM83EQ2M2I3 478 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 CHRFAM7AQ494W8 412 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 ADNP2Q6IQ32 1131 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 ZNF584Q8IVC4 421 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 TRAM1L1Q8N609 369 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 SPERTQ8NA61 448 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 OR4A15Q8NGL6 344 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 OR10G4Q8NGN3 311 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 OR5AR1Q8NGP9 310 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 APH1AQ96BI3 265 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 ZNF396Q96N95 335 aaPredicted RBP1.74□□□□□ -2.13
CHD9-209ENST00000564255 MICU1Q9BPX6 476 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 CHID1Q9BWS9 393 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 PARP12Q9H0J9 701 aaKnown RBP1.74□□□□□ -2.13
CHD9-209ENST00000564255 NUFIP1Q9UHK0 495 aaKnown RBP1.74□□□□□ -2.13
CHD9-209ENST00000564255 TP53TG3Q9ULZ0 132 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 ZNFX1Q9P2E3 1918 aaKnown RBP1.74□□□□□ -2.13
CHD9-209ENST00000564255 H3BN98 237 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 NME4O00746 187 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 POLR1CO15160 346 aaPredicted RBP1.74□□□□□ -2.13
CHD9-209ENST00000564255 ACTL6AO96019 429 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 PAHP00439 452 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 HOXC4P09017 264 aaPredicted RBP1.74□□□□□ -2.13
CHD9-209ENST00000564255 CD9P21926 228 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 GABRR2P28476 465 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 NMUP48645 174 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 KRTAP10-7P60409 375 aaPredicted RBP1.74□□□□□ -2.13
CHD9-209ENST00000564255 ZNF79Q15937 498 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 C5orf64Q2M2E5 130 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 RSPO1Q2MKA7 263 aaPredicted RBP1.74□□□□□ -2.13
CHD9-209ENST00000564255 SLC35D2Q76EJ3 337 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 CCDC54Q8NEL0 328 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 OR10AD1Q8NGE0 317 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 OR10W1Q8NGF6 305 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 OR6Q1Q8NGQ2 317 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 APH1BQ8WW43 257 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 FAM210BQ96KR6 192 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 ZNF317Q96PQ6 595 aaPredicted RBP1.74□□□□□ -2.13
CHD9-209ENST00000564255 ISYNA1Q9NPH2 558 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 ZNHIT6Q9NWK9 470 aaKnown RBP1.74□□□□□ -2.13
CHD9-209ENST00000564255 CDC42BPBQ9Y5S2 1711 aa1.74□□□□□ -2.13
CHD9-209ENST00000564255 IGHV3-64DA0A0J9YX35 117 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 LAD1O00515 517 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 PLPP1O14494 284 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 KMOO15229 486 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 ZNF861PO60384 105 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 SS18L1O75177 396 aaPredicted RBP1.73□□□□□ -2.13
CHD9-209ENST00000564255 PMCHP20382 165 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 WARSP23381 471 aaKnown RBP1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms