RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 SLC45A1Q9Y2W3 748 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 ARL2-SNX15V9GYD0 113 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 LAMB2P55268 1798 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.72□□□□□ -1.49
CLK3-212ENST00000563418 GLB1P16278 677 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 TAL1P17542 331 aaPredicted RBP5.72□□□□□ -1.49
CLK3-212ENST00000563418 PSMB10P40306 273 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 HMGA2P52926 109 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 TBPL1P62380 186 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 TMEM123Q8N131 208 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 SGIP1Q9BQI5 828 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 CDC42EP3Q9UKI2 254 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 WIPI2Q9Y4P8 454 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 FER1L4A9Z1Z3 1794 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 ICOSLGO75144 302 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 GRPRP30550 384 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 PYCR3Q53H96 274 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 RCBTB1Q8NDN9 531 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 OR52L2PQ8NGH6 319 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 STACQ99469 402 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 RNF19AQ9NV58 838 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 KIAA1456Q9P272 454 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 SERPINE3A8MV23 424 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 HSBP1O75506 76 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 OR2J2O76002 312 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 IDSP22304 550 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 NPBWR2P48146 333 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 NKG7Q16617 165 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 ZNF511Q8NB15 262 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 OR4N2Q8NGD1 307 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 SELENOIQ9C0D9 397 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 CHST8Q9H2A9 424 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 NUMA1Q14980 2115 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 C1QTNF3-AMACRE9PGA6 284 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 FABP2P12104 132 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 BCL6P41182 706 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 ARSJQ5FYB0 599 aaPredicted RBP5.72□□□□□ -1.49
CLK3-212ENST00000563418 MEX3BQ6ZN04 569 aaKnown RBP5.72□□□□□ -1.49
CLK3-212ENST00000563418 DPY19L2P2Q6ZN68 376 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 CERS5Q8N5B7 392 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 SFXN1Q9H9B4 322 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 OSGIN2Q9Y236 505 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 FAM72CH0Y354 149 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 PMELP40967 661 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 NKX2-1P43699 371 aaPredicted RBP5.72□□□□□ -1.49
CLK3-212ENST00000563418 KHDC3LQ587J8 217 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 FAM72AQ5TYM5 149 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 FAM72DQ6L9T8 149 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 FAM72BQ86X60 149 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 CLDN19Q8N6F1 224 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 HDAC8Q9BY41 377 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 RAB33BQ9H082 229 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 WNT5BQ9H1J7 359 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 NKX2-4Q9H2Z4 354 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 CMC2Q9NRP2 79 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 DHCR7Q9UBM7 475 aaKnown RBP5.72□□□□□ -1.49
CLK3-212ENST00000563418 HSPB7Q9UBY9 170 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 FAM198AQ9UFP1 575 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 ZFP30Q9Y2G7 519 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 SCN7AQ01118 1682 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 DRGXA6NNA5 263 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 GSTP1P09211 210 aaKnown RBP5.72□□□□□ -1.49
CLK3-212ENST00000563418 SBK3P0C264 359 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 ZNF28P17035 718 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 CORO1AP31146 461 aaKnown RBP5.72□□□□□ -1.49
CLK3-212ENST00000563418 GPX4P36969 197 aaPredicted RBP5.72□□□□□ -1.49
CLK3-212ENST00000563418 CSNK1G2P78368 415 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 CLEC1AQ8NC01 280 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 LMF2Q9BU23 707 aaKnown RBP5.72□□□□□ -1.49
CLK3-212ENST00000563418 SPATC1LQ9H0A9 340 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 PLEKHF2Q9H8W4 249 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 ZNF443Q9Y2A4 671 aaPredicted RBP5.72□□□□□ -1.49
CLK3-212ENST00000563418 A0A1W2PN81 502 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 FAM183AA6NL82 134 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 KIAA1324LA8MWY0 1029 aaPredicted RBP5.72□□□□□ -1.49
CLK3-212ENST00000563418 CHRNA7P36544 502 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 HERPUD1Q15011 391 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 OR4C11Q6IEV9 310 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 STAC2Q6ZMT1 411 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 NIT1Q86X76 327 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 CFAP52Q8N1V2 620 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 BCL2L2Q92843 193 aaPredicted RBP5.72□□□□□ -1.49
CLK3-212ENST00000563418 WDR92Q96MX6 357 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 P4HTMQ9NXG6 502 aa5.72□□□□□ -1.49
CLK3-212ENST00000563418 A0A0B4J293 547 aa5.71□□□□□ -1.49
CLK3-212ENST00000563418 GP1BBP13224 206 aa5.71□□□□□ -1.49
CLK3-212ENST00000563418 ST6GAL1P15907 406 aa5.71□□□□□ -1.49
CLK3-212ENST00000563418 ZNF85Q03923 595 aa5.71□□□□□ -1.49
CLK3-212ENST00000563418 EGR3Q06889 387 aa5.71□□□□□ -1.49
CLK3-212ENST00000563418 BAXQ07812 192 aa5.71□□□□□ -1.49
CLK3-212ENST00000563418 NECAP1Q8NC96 275 aa5.71□□□□□ -1.49
CLK3-212ENST00000563418 OR11H4Q8NGC9 324 aa5.71□□□□□ -1.49
CLK3-212ENST00000563418 MIEN1Q9BRT3 115 aa5.71□□□□□ -1.49
CLK3-212ENST00000563418 ZNF442Q9H7R0 627 aa5.71□□□□□ -1.49
CLK3-212ENST00000563418 PAM16Q9Y3D7 125 aa5.71□□□□□ -1.49
CLK3-212ENST00000563418 YIPF1Q9Y548 306 aa5.71□□□□□ -1.49
CLK3-212ENST00000563418 NUP98P52948 1817 aa5.71□□□□□ -1.49
CLK3-212ENST00000563418 C9orf170A2RU37 121 aa5.71□□□□□ -1.49
CLK3-212ENST00000563418 TRAPPC2LH3BP13 241 aa5.71□□□□□ -1.49
CLK3-212ENST00000563418 PRNPP04156 253 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms