RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 RFPL4BQ6ZWI9 263 aa14.18□□□□□ -0.14
CDT1-202ENST00000562747 ZDHHC13Q8IUH4 622 aa14.18□□□□□ -0.14
CDT1-202ENST00000562747 PARP8Q8N3A8 854 aa14.18□□□□□ -0.14
CDT1-202ENST00000562747 ZNF525Q8N782 197 aa14.18□□□□□ -0.14
CDT1-202ENST00000562747 OR9Q1Q8NGQ5 310 aa14.18□□□□□ -0.14
CDT1-202ENST00000562747 IPCEF1Q8WWN9 437 aaPredicted RBP14.18□□□□□ -0.14
CDT1-202ENST00000562747 LRTOMTQ8WZ04 291 aa14.18□□□□□ -0.14
CDT1-202ENST00000562747 MARS2Q96GW9 593 aaKnown RBP14.18□□□□□ -0.14
CDT1-202ENST00000562747 TEX12Q9BXU0 123 aa14.18□□□□□ -0.14
CDT1-202ENST00000562747 TUBG2Q9NRH3 451 aa14.18□□□□□ -0.14
CDT1-202ENST00000562747 MYEF2Q9P2K5 600 aaKnown RBP14.18□□□□□ -0.14
CDT1-202ENST00000562747 NBEAL1Q6ZS30 2694 aa14.18□□□□□ -0.14
CDT1-202ENST00000562747 J3QW42 95 aa14.17□□□□□ -0.14
CDT1-202ENST00000562747 CLPTM1O96005 669 aa14.17□□□□□ -0.14
CDT1-202ENST00000562747 IGHV3-13P01766 116 aa14.17□□□□□ -0.14
CDT1-202ENST00000562747 FAM157CP0CG43 387 aa14.17□□□□□ -0.14
CDT1-202ENST00000562747 ZNF23P17027 643 aa14.17□□□□□ -0.14
CDT1-202ENST00000562747 PAICSP22234 425 aaKnown RBP14.17□□□□□ -0.14
CDT1-202ENST00000562747 GCH1P30793 250 aa14.17□□□□□ -0.14
CDT1-202ENST00000562747 FMO3P31513 532 aa14.17□□□□□ -0.14
CDT1-202ENST00000562747 ALDH3B1P43353 468 aa14.17□□□□□ -0.14
CDT1-202ENST00000562747 DAPP51397 102 aa14.17□□□□□ -0.14
CDT1-202ENST00000562747 TMEM249Q2WGJ8 235 aa14.17□□□□□ -0.14
CDT1-202ENST00000562747 KRTAP24-1Q3LI83 254 aa14.17□□□□□ -0.14
CDT1-202ENST00000562747 CORO6Q6QEF8 472 aa14.17□□□□□ -0.14
CDT1-202ENST00000562747 AMIGO2Q86SJ2 522 aa14.17□□□□□ -0.14
CDT1-202ENST00000562747 LINC00346Q8IVM7 164 aa14.17□□□□□ -0.14
CDT1-202ENST00000562747 ZCCHC24Q8N2G6 241 aaKnown RBP14.17□□□□□ -0.14
CDT1-202ENST00000562747 OR51L1Q8NGJ5 315 aa14.17□□□□□ -0.14
CDT1-202ENST00000562747 SLC25A40Q8TBP6 338 aa14.17□□□□□ -0.14
CDT1-202ENST00000562747 ZNRF4Q8WWF5 429 aa14.17□□□□□ -0.14
CDT1-202ENST00000562747 FAM168AQ92567 244 aa14.17□□□□□ -0.14
CDT1-202ENST00000562747 COG8Q96MW5 612 aa14.17□□□□□ -0.14
CDT1-202ENST00000562747 OR2J1Q9GZK6 312 aa14.17□□□□□ -0.14
CDT1-202ENST00000562747 GABARAPL1Q9H0R8 117 aa14.17□□□□□ -0.14
CDT1-202ENST00000562747 SLC25A19Q9HC21 320 aa14.17□□□□□ -0.14
CDT1-202ENST00000562747 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.17□□□□□ -0.14
CDT1-202ENST00000562747 TAAR3PQ9P1P4 343 aa14.17□□□□□ -0.14
CDT1-202ENST00000562747 GRIP1Q9Y3R0 1128 aa14.17□□□□□ -0.14
CDT1-202ENST00000562747 NDUFS8O00217 210 aa14.16□□□□□ -0.14
CDT1-202ENST00000562747 SURF4O15260 269 aa14.16□□□□□ -0.14
CDT1-202ENST00000562747 LY6HO94772 140 aa14.16□□□□□ -0.14
CDT1-202ENST00000562747 NGFP01138 241 aa14.16□□□□□ -0.14
CDT1-202ENST00000562747 GYPBP06028 91 aa14.16□□□□□ -0.14
CDT1-202ENST00000562747 SLC25A16P16260 332 aa14.16□□□□□ -0.14
CDT1-202ENST00000562747 RGS6P49758 472 aa14.16□□□□□ -0.14
CDT1-202ENST00000562747 PDLIM4P50479 330 aa14.16□□□□□ -0.14
CDT1-202ENST00000562747 CRISP1P54107 249 aa14.16□□□□□ -0.14
CDT1-202ENST00000562747 ESRRGP62508 458 aa14.16□□□□□ -0.14
CDT1-202ENST00000562747 ECH1Q13011 328 aa14.16□□□□□ -0.14
CDT1-202ENST00000562747 KPNB1Q14974 876 aaKnown RBP14.16□□□□□ -0.14
CDT1-202ENST00000562747 MAD2L1BPQ15013 274 aaPredicted RBP14.16□□□□□ -0.14
CDT1-202ENST00000562747 NKPD1Q17RQ9 610 aa14.16□□□□□ -0.14
CDT1-202ENST00000562747 ZFP1Q6P2D0 407 aa14.16□□□□□ -0.14
CDT1-202ENST00000562747 CFAP77Q6ZQR2 320 aa14.16□□□□□ -0.14
CDT1-202ENST00000562747 C10orf67Q8IYJ2 551 aa14.16□□□□□ -0.14
CDT1-202ENST00000562747 KLF14Q8TD94 323 aaPredicted RBP14.16□□□□□ -0.14
CDT1-202ENST00000562747 C10orf105Q8TEF2 133 aa14.16□□□□□ -0.14
CDT1-202ENST00000562747 SNX33Q8WV41 574 aa14.16□□□□□ -0.14
CDT1-202ENST00000562747 SLC7A6Q92536 515 aa14.16□□□□□ -0.14
CDT1-202ENST00000562747 CENPNQ96H22 339 aaPredicted RBP14.16□□□□□ -0.14
CDT1-202ENST00000562747 PITX2Q99697 317 aa14.16□□□□□ -0.14
CDT1-202ENST00000562747 TPK1Q9H3S4 243 aa14.16□□□□□ -0.14
CDT1-202ENST00000562747 COMMD3-BMI1R4GMX3 469 aa14.16□□□□□ -0.14
CDT1-202ENST00000562747 LOC390937A0A1W2PQ73 354 aa14.15□□□□□ -0.14
CDT1-202ENST00000562747 TVP23AA6NH52 213 aa14.15□□□□□ -0.14
CDT1-202ENST00000562747 FAM183AA6NL82 134 aa14.15□□□□□ -0.14
CDT1-202ENST00000562747 PRR23D1E9PI22 279 aaPredicted RBP14.15□□□□□ -0.14
CDT1-202ENST00000562747 MT-ND5P03915 603 aa14.15□□□□□ -0.14
CDT1-202ENST00000562747 PRR23D2P0DMB1 279 aaPredicted RBP14.15□□□□□ -0.14
CDT1-202ENST00000562747 CLUP10909 449 aa14.15□□□□□ -0.14
CDT1-202ENST00000562747 ENTPD1P49961 510 aa14.15□□□□□ -0.14
CDT1-202ENST00000562747 PCK2Q16822 640 aa14.15□□□□□ -0.14
CDT1-202ENST00000562747 TEX30Q5JUR7 227 aa14.15□□□□□ -0.14
CDT1-202ENST00000562747 SPATA46Q5T0L3 261 aa14.15□□□□□ -0.14
CDT1-202ENST00000562747 LINC01590Q5TEZ4 76 aa14.15□□□□□ -0.14
CDT1-202ENST00000562747 KDM4DQ6B0I6 523 aa14.15□□□□□ -0.14
CDT1-202ENST00000562747 OR6K6Q8NGW6 343 aa14.15□□□□□ -0.14
CDT1-202ENST00000562747 PYDC1Q8WXC3 89 aa14.15□□□□□ -0.14
CDT1-202ENST00000562747 PTP4A1Q93096 173 aa14.15□□□□□ -0.14
CDT1-202ENST00000562747 RAB3IPQ96QF0 476 aaPredicted RBP14.15□□□□□ -0.14
CDT1-202ENST00000562747 ATF6BQ99941 703 aa14.15□□□□□ -0.14
CDT1-202ENST00000562747 PNRC2Q9NPJ4 139 aaKnown RBP14.15□□□□□ -0.14
CDT1-202ENST00000562747 KRT84Q9NSB2 600 aa14.15□□□□□ -0.14
CDT1-202ENST00000562747 CGGBP1Q9UFW8 167 aaPredicted RBP14.15□□□□□ -0.14
CDT1-202ENST00000562747 ENOPH1Q9UHY7 261 aa14.15□□□□□ -0.14
CDT1-202ENST00000562747 C17orf100A8MU93 164 aa14.14□□□□□ -0.15
CDT1-202ENST00000562747 GLCEO94923 617 aa14.14□□□□□ -0.15
CDT1-202ENST00000562747 DBHP09172 617 aa14.14□□□□□ -0.15
CDT1-202ENST00000562747 NAT2P11245 290 aa14.14□□□□□ -0.15
CDT1-202ENST00000562747 DAOP14920 347 aa14.14□□□□□ -0.15
CDT1-202ENST00000562747 ZNF16P17020 682 aaPredicted RBP14.14□□□□□ -0.15
CDT1-202ENST00000562747 LIPAP38571 399 aa14.14□□□□□ -0.15
CDT1-202ENST00000562747 MPV17P39210 176 aa14.14□□□□□ -0.15
CDT1-202ENST00000562747 SRSF2Q01130 221 aaKnown RBP14.14□□□□□ -0.15
CDT1-202ENST00000562747 LOXL1Q08397 574 aaPredicted RBP14.14□□□□□ -0.15
CDT1-202ENST00000562747 ALKBH6Q3KRA9 238 aa14.14□□□□□ -0.15
CDT1-202ENST00000562747 KRTAP27-1Q3LI81 207 aa14.14□□□□□ -0.15
CDT1-202ENST00000562747 TMEM236Q5W0B7 351 aa14.14□□□□□ -0.15
CDT1-202ENST00000562747 LYPD4Q6UWN0 246 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms