RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 C1QL4Q86Z23 238 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 DND1Q8IYX4 353 aaKnown RBP11.97□□□□□ -0.49
CLK3-206ENST00000562078 OR10J5Q8NHC4 309 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 NT5CQ8TCD5 201 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 ZBTB8AQ96BR9 441 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 ZNF681Q96N22 645 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 OR2A5Q96R48 311 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 ZNF350Q9GZX5 532 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 RIMS4Q9H426 269 aaPredicted RBP11.97□□□□□ -0.49
CLK3-206ENST00000562078 RGCCQ9H4X1 137 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 SIRT7Q9NRC8 400 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 VSX1Q9NZR4 365 aaPredicted RBP11.97□□□□□ -0.49
CLK3-206ENST00000562078 TMEM238LA0A1B0GVL6 79 aa11.96□□□□□ -0.49
CLK3-206ENST00000562078 ZNF860A6NHJ4 632 aa11.96□□□□□ -0.49
CLK3-206ENST00000562078 DCTN6O00399 190 aa11.96□□□□□ -0.49
CLK3-206ENST00000562078 XRCC3O43542 346 aa11.96□□□□□ -0.49
CLK3-206ENST00000562078 ZNF84P51523 738 aa11.96□□□□□ -0.49
CLK3-206ENST00000562078 EFNB2P52799 333 aa11.96□□□□□ -0.49
CLK3-206ENST00000562078 SLC26A5P58743 744 aa11.96□□□□□ -0.49
CLK3-206ENST00000562078 NAAAQ02083 359 aa11.96□□□□□ -0.49
CLK3-206ENST00000562078 SSPNQ14714 243 aa11.96□□□□□ -0.49
CLK3-206ENST00000562078 AMZ1Q400G9 498 aa11.96□□□□□ -0.49
CLK3-206ENST00000562078 SLC35D3Q5M8T2 416 aa11.96□□□□□ -0.49
CLK3-206ENST00000562078 EXOSC6Q5RKV6 272 aaKnown RBP11.96□□□□□ -0.49
CLK3-206ENST00000562078 UNQ9370/PRO34162Q6UXP9 181 aa11.96□□□□□ -0.49
CLK3-206ENST00000562078 TMPPEQ6ZT21 453 aa11.96□□□□□ -0.49
CLK3-206ENST00000562078 GDF7Q7Z4P5 450 aa11.96□□□□□ -0.49
CLK3-206ENST00000562078 GJD3Q8N144 294 aa11.96□□□□□ -0.49
CLK3-206ENST00000562078 NUP43Q8NFH3 380 aa11.96□□□□□ -0.49
CLK3-206ENST00000562078 CLDN23Q96B33 292 aa11.96□□□□□ -0.49
CLK3-206ENST00000562078 OR7D2Q96RA2 312 aa11.96□□□□□ -0.49
CLK3-206ENST00000562078 RAB33BQ9H082 229 aa11.96□□□□□ -0.49
CLK3-206ENST00000562078 BCO1Q9HAY6 547 aa11.96□□□□□ -0.49
CLK3-206ENST00000562078 LAMA1P25391 3075 aa11.96□□□□□ -0.49
CLK3-206ENST00000562078 PSMD9O00233 223 aa11.96□□□□□ -0.5
CLK3-206ENST00000562078 LRP3O75074 770 aa11.96□□□□□ -0.5
CLK3-206ENST00000562078 CALCBP10092 127 aa11.96□□□□□ -0.5
CLK3-206ENST00000562078 RNH1P13489 461 aaKnown RBP11.96□□□□□ -0.5
CLK3-206ENST00000562078 DVL1P1P54792 670 aaPredicted RBP11.96□□□□□ -0.5
CLK3-206ENST00000562078 LTBQ06643 244 aa11.96□□□□□ -0.5
CLK3-206ENST00000562078 DECR1Q16698 335 aa11.96□□□□□ -0.5
CLK3-206ENST00000562078 THSD4Q6ZMP0 1018 aa11.96□□□□□ -0.5
CLK3-206ENST00000562078 MBOAT2Q6ZWT7 520 aa11.96□□□□□ -0.5
CLK3-206ENST00000562078 ZNF761Q86XN6 746 aaPredicted RBP11.96□□□□□ -0.5
CLK3-206ENST00000562078 GALNT16Q8N428 558 aa11.96□□□□□ -0.5
CLK3-206ENST00000562078 CLEC1AQ8NC01 280 aa11.96□□□□□ -0.5
CLK3-206ENST00000562078 SEMA6DQ8NFY4 1073 aa11.96□□□□□ -0.5
CLK3-206ENST00000562078 OR51L1Q8NGJ5 315 aa11.96□□□□□ -0.5
CLK3-206ENST00000562078 C15orf40Q8WUR7 153 aa11.96□□□□□ -0.5
CLK3-206ENST00000562078 COL26A1Q96A83 441 aa11.96□□□□□ -0.5
CLK3-206ENST00000562078 MOAP1Q96BY2 351 aa11.96□□□□□ -0.5
CLK3-206ENST00000562078 FOXRED1Q96CU9 486 aaPredicted RBP11.96□□□□□ -0.5
CLK3-206ENST00000562078 OPN3Q9H1Y3 402 aaPredicted RBP11.96□□□□□ -0.5
CLK3-206ENST00000562078 TMEM74BQ9NUR3 256 aa11.96□□□□□ -0.5
CLK3-206ENST00000562078 ADAM18Q9Y3Q7 739 aa11.96□□□□□ -0.5
CLK3-206ENST00000562078 EML5Q05BV3 1969 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 TMEM131Q92545 1883 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 A0A1W2PPC4 97 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 TNFSF14O43557 240 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 DNAJB6O75190 326 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 ALOX12BO75342 701 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 GLCEO94923 617 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 TNFP01375 233 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 OR8U9P0C7N5 309 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 THEGLP0DJG4 465 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 ADRA2CP18825 462 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 NAA10P41227 235 aaPredicted RBP11.95□□□□□ -0.5
CLK3-206ENST00000562078 CXCL12P48061 93 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 LSSP48449 732 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 RPP30P78346 268 aaKnown RBP11.95□□□□□ -0.5
CLK3-206ENST00000562078 CRMP1Q14194 572 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 NKPD1Q17RQ9 610 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 NKAIN2Q5VXU1 208 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 ZNF585AQ6P3V2 769 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 NPSR1Q6W5P4 371 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 TAF8Q7Z7C8 310 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 TMPRSS12Q86WS5 348 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 PRSS35Q8N3Z0 413 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 ZSCAN4Q8NAM6 433 aaPredicted RBP11.95□□□□□ -0.5
CLK3-206ENST00000562078 OR8U1Q8NH10 309 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 ADAMTS17Q8TE56 1095 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 DTD1Q8TEA8 209 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 SLC37A2Q8TED4 501 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 SLC25A43Q8WUT9 341 aaPredicted RBP11.95□□□□□ -0.5
CLK3-206ENST00000562078 TM4SF19Q96DZ7 209 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 ZMYND19Q96E35 227 aaPredicted RBP11.95□□□□□ -0.5
CLK3-206ENST00000562078 MVB12AQ96EY5 273 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 BCL2L10Q9HD36 194 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 UPB1Q9UBR1 384 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 MRPS2Q9Y399 296 aaKnown RBP11.95□□□□□ -0.5
CLK3-206ENST00000562078 TRAV18A0A075B6X5 111 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 SYNDIG1LA6NDD5 238 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 MSGN1A6NI15 193 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 A8MWP6 167 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 FABP4P15090 132 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 ZNF25P17030 456 aaPredicted RBP11.95□□□□□ -0.5
CLK3-206ENST00000562078 VAMP1P23763 118 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 CRABP1P29762 137 aa11.95□□□□□ -0.5
CLK3-206ENST00000562078 RGS8P57771 180 aaPredicted RBP11.95□□□□□ -0.5
CLK3-206ENST00000562078 PPP1CAP62136 330 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms