RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 HLA-AP01891 365 aaKnown RBP6.54□□□□□ -1.36
CDH1-203ENST00000561751 CD3DP04234 171 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 CST2P09228 141 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 PIRTP0C851 137 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 TRGC1P0CF51 173 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 TMEM225BP0DP42 221 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 CTSAP10619 480 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 FABP4P15090 132 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 HMGA1P17096 107 aaKnown RBP6.54□□□□□ -1.36
CDH1-203ENST00000561751 FSTP19883 344 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 CD22P20273 847 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 HOXD9P28356 352 aaPredicted RBP6.54□□□□□ -1.36
CDH1-203ENST00000561751 ACVR1BP36896 505 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 NPY4RP50391 375 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 DGKEP52429 567 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 PDX1P52945 283 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 SELENOTP62341 195 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 IL13RA1P78552 427 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 ZXDBP98169 803 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 BEX3Q00994 111 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 LMAN2Q12907 356 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 PLA2G7Q13093 441 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 HERPUD1Q15011 391 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 Q499Y3 187 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 COL5A1-AS1Q5SY13 56 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 CDPF1Q6NVV7 123 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 ZNF774Q6NX45 483 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 MED25Q71SY5 747 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 CHST9Q7L1S5 443 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 GKN2Q86XP6 184 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 THNSL2Q86YJ6 484 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 RBM45Q8IUH3 476 aaKnown RBP6.54□□□□□ -1.36
CDH1-203ENST00000561751 ZNF595Q8IYB9 648 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 OR2L13Q8N349 312 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 ZSCAN4Q8NAM6 433 aaPredicted RBP6.54□□□□□ -1.36
CDH1-203ENST00000561751 NOXO1Q8NFA2 376 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 BBS1Q8NFJ9 593 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 OR56B2PQ8NGI1 322 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 OR1N1Q8NGS0 311 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 ASB5Q8WWX0 329 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 DNASE2BQ8WZ79 361 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 TMEM106AQ96A25 262 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 ISOC2Q96AB3 205 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 TMEM18Q96B42 140 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 ARSGQ96EG1 525 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 CPNE2Q96FN4 548 aaPredicted RBP6.54□□□□□ -1.36
CDH1-203ENST00000561751 TMEM169Q96HH4 297 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 BTF3L4Q96K17 158 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 FAM71F1Q96KD3 344 aaPredicted RBP6.54□□□□□ -1.36
CDH1-203ENST00000561751 MRGPRX3Q96LB0 322 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 SPATA33Q96N06 139 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 PRAP1Q96NZ9 151 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 LYSMD1Q96S90 227 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 URM1Q9BTM9 101 aaKnown RBP6.54□□□□□ -1.36
CDH1-203ENST00000561751 SUCNR1Q9BXA5 334 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 RSPO3Q9BXY4 272 aaPredicted RBP6.54□□□□□ -1.36
CDH1-203ENST00000561751 GPR87Q9BY21 358 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 KATNBL1Q9H079 304 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 RAB33BQ9H082 229 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 CXCL16Q9H2A7 254 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 KIR3DX1Q9H7L2 352 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 CDH20Q9HBT6 801 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 SRA1Q9HD15 236 aaKnown RBP6.54□□□□□ -1.36
CDH1-203ENST00000561751 USP36Q9P275 1121 aaKnown RBP6.54□□□□□ -1.36
CDH1-203ENST00000561751 SERGEFQ9UGK8 458 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 SUSD2Q9UGT4 822 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 ADAM29Q9UKF5 820 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 IKZF2Q9UKS7 526 aa6.54□□□□□ -1.36
CDH1-203ENST00000561751 MTCL1Q9Y4B5 1905 aaKnown RBP6.54□□□□□ -1.36
CDH1-203ENST00000561751 LAMA2P24043 3122 aaKnown RBP6.53□□□□□ -1.36
CDH1-203ENST00000561751 GREB1Q4ZG55 1949 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 CPED1A4D0V7 1026 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 ZNF736B4DX44 427 aaPredicted RBP6.53□□□□□ -1.36
CDH1-203ENST00000561751 ZNF354AO60765 605 aaPredicted RBP6.53□□□□□ -1.36
CDH1-203ENST00000561751 LRP3O75074 770 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 DUSP11O75319 330 aaKnown RBP6.53□□□□□ -1.36
CDH1-203ENST00000561751 MMP23AO75900 390 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 NXPH2O95156 264 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 GPANK1O95872 356 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 AGR2O95994 175 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 IL18BPO95998 194 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 CHRM2P08172 466 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 NPSP0C0P6 89 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 ZNF286BP0CG31 522 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 ZNF888P0CJ79 500 aaPredicted RBP6.53□□□□□ -1.36
CDH1-203ENST00000561751 NR2F1P10589 423 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 C6P13671 934 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 AKR1A1P14550 325 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 EDNRAP25101 427 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 OR10J1P30954 320 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 BMI1P35226 326 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 SOAT1P35610 550 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 AQP2P41181 271 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 OR1G1P47890 313 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 GABRA4P48169 554 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 AFF3P51826 1226 aaKnown RBP6.53□□□□□ -1.36
CDH1-203ENST00000561751 REEP5Q00765 189 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 RUNX2Q13950 521 aa6.53□□□□□ -1.36
CDH1-203ENST00000561751 KHDRBS2Q5VWX1 349 aaKnown RBP6.53□□□□□ -1.36
CDH1-203ENST00000561751 CYB5R2Q6BCY4 276 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms