RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 CDC42EP3Q9UKI2 254 aa17.57■□□□□ 0.4
TPM1-232ENST00000561425 ZDHHC8Q9ULC8 765 aa17.57■□□□□ 0.4
TPM1-232ENST00000561425 BAIAP2Q9UQB8 552 aa17.57■□□□□ 0.4
TPM1-232ENST00000561425 U3KQV3 271 aa17.57■□□□□ 0.4
TPM1-232ENST00000561425 JMJD1CQ15652 2540 aa17.57■□□□□ 0.4
TPM1-232ENST00000561425 ARRDC5A6NEK1 342 aa17.56■□□□□ 0.4
TPM1-232ENST00000561425 DNAJC8O75937 253 aaPredicted RBP17.56■□□□□ 0.4
TPM1-232ENST00000561425 DBHP09172 617 aa17.56■□□□□ 0.4
TPM1-232ENST00000561425 RGS6P49758 472 aa17.56■□□□□ 0.4
TPM1-232ENST00000561425 CDK5R2Q13319 367 aa17.56■□□□□ 0.4
TPM1-232ENST00000561425 SLC36A3Q495N2 470 aa17.56■□□□□ 0.4
TPM1-232ENST00000561425 OR4Q3Q8NH05 313 aa17.56■□□□□ 0.4
TPM1-232ENST00000561425 ZNRF4Q8WWF5 429 aa17.56■□□□□ 0.4
TPM1-232ENST00000561425 PTP4A1Q93096 173 aa17.56■□□□□ 0.4
TPM1-232ENST00000561425 DIRC2Q96SL1 478 aa17.56■□□□□ 0.4
TPM1-232ENST00000561425 RBM4Q9BWF3 364 aaKnown RBP17.56■□□□□ 0.4
TPM1-232ENST00000561425 NMNAT2Q9BZQ4 307 aa17.56■□□□□ 0.4
TPM1-232ENST00000561425 PNRC2Q9NPJ4 139 aaKnown RBP17.56■□□□□ 0.4
TPM1-232ENST00000561425 PURGQ9UJV8 347 aaKnown RBP17.56■□□□□ 0.4
TPM1-232ENST00000561425 GRIP1Q9Y3R0 1128 aa17.56■□□□□ 0.4
TPM1-232ENST00000561425 IGHV1-69-2A0A0G2JMI3 117 aa17.55■□□□□ 0.4
TPM1-232ENST00000561425 ERICH4A6NGS2 130 aa17.55■□□□□ 0.4
TPM1-232ENST00000561425 WNT9BO14905 357 aa17.55■□□□□ 0.4
TPM1-232ENST00000561425 IGFBP5P24593 272 aa17.55■□□□□ 0.4
TPM1-232ENST00000561425 CENPAP49450 140 aa17.55■□□□□ 0.4
TPM1-232ENST00000561425 CDH15P55291 814 aa17.55■□□□□ 0.4
TPM1-232ENST00000561425 CORO6Q6QEF8 472 aa17.55■□□□□ 0.4
TPM1-232ENST00000561425 SLC37A3Q8NCC5 494 aa17.55■□□□□ 0.4
TPM1-232ENST00000561425 PAPD5Q8NDF8 572 aaKnown RBP17.55■□□□□ 0.4
TPM1-232ENST00000561425 CLDND2Q8NHS1 167 aa17.55■□□□□ 0.4
TPM1-232ENST00000561425 CMBLQ96DG6 245 aa17.55■□□□□ 0.4
TPM1-232ENST00000561425 NIPSNAP1Q9BPW8 284 aa17.55■□□□□ 0.4
TPM1-232ENST00000561425 TSSK6Q9BXA6 273 aa17.55■□□□□ 0.4
TPM1-232ENST00000561425 FN3KQ9H479 309 aa17.55■□□□□ 0.4
TPM1-232ENST00000561425 DECR2Q9NUI1 292 aa17.55■□□□□ 0.4
TPM1-232ENST00000561425 LPAR3Q9UBY5 353 aa17.55■□□□□ 0.4
TPM1-232ENST00000561425 KCNG2Q9UJ96 466 aa17.55■□□□□ 0.4
TPM1-232ENST00000561425 TCRBV3S1A0A5B6 114 aa17.54■□□□□ 0.4
TPM1-232ENST00000561425 PLSCR5A0PG75 271 aa17.54■□□□□ 0.4
TPM1-232ENST00000561425 DHRS12A0PJE2 317 aa17.54■□□□□ 0.4
TPM1-232ENST00000561425 CST1P01037 141 aa17.54■□□□□ 0.4
TPM1-232ENST00000561425 TGFAP01135 160 aa17.54■□□□□ 0.4
TPM1-232ENST00000561425 FAM157CP0CG43 387 aa17.54■□□□□ 0.4
TPM1-232ENST00000561425 RAC2P15153 192 aa17.54■□□□□ 0.4
TPM1-232ENST00000561425 LMO4P61968 165 aa17.54■□□□□ 0.4
TPM1-232ENST00000561425 TSTQ16762 297 aaKnown RBP17.54■□□□□ 0.4
TPM1-232ENST00000561425 PCK2Q16822 640 aa17.54■□□□□ 0.4
TPM1-232ENST00000561425 FBXW12Q6X9E4 464 aa17.54■□□□□ 0.4
TPM1-232ENST00000561425 CFAP77Q6ZQR2 320 aa17.54■□□□□ 0.4
TPM1-232ENST00000561425 USP51Q70EK9 711 aa17.54■□□□□ 0.4
TPM1-232ENST00000561425 TMEM179BQ7Z7N9 219 aa17.54■□□□□ 0.4
TPM1-232ENST00000561425 LINC01356Q8N9X3 169 aa17.54■□□□□ 0.4
TPM1-232ENST00000561425 OR10G2Q8NGC3 310 aa17.54■□□□□ 0.4
TPM1-232ENST00000561425 OR2T4Q8NH00 348 aa17.54■□□□□ 0.4
TPM1-232ENST00000561425 FEVQ99581 238 aa17.54■□□□□ 0.4
TPM1-232ENST00000561425 KCNS2Q9ULS6 477 aa17.54■□□□□ 0.4
TPM1-232ENST00000561425 MALRD1Q5VYJ5 2156 aa17.53■□□□□ 0.4
TPM1-232ENST00000561425 GSC2O15499 205 aa17.53■□□□□ 0.4
TPM1-232ENST00000561425 SPRY3O43610 288 aa17.53■□□□□ 0.4
TPM1-232ENST00000561425 CDC14BO60729 498 aa17.53■□□□□ 0.4
TPM1-232ENST00000561425 SLC25A1P53007 311 aa17.53■□□□□ 0.4
TPM1-232ENST00000561425 ECH1Q13011 328 aa17.53■□□□□ 0.4
TPM1-232ENST00000561425 ZMAT1Q5H9K5 638 aa17.53■□□□□ 0.4
TPM1-232ENST00000561425 Q6ZR03 302 aa17.53■□□□□ 0.4
TPM1-232ENST00000561425 CYB561A3Q8NBI2 242 aa17.53■□□□□ 0.4
TPM1-232ENST00000561425 OR2T33Q8NG76 320 aa17.53■□□□□ 0.4
TPM1-232ENST00000561425 GIPC3Q8TF64 312 aa17.53■□□□□ 0.4
TPM1-232ENST00000561425 APOBEC3DQ96AK3 386 aaPredicted RBP17.53■□□□□ 0.4
TPM1-232ENST00000561425 MAP6Q96JE9 813 aa17.53■□□□□ 0.4
TPM1-232ENST00000561425 C1QTNF5Q9BXJ0 243 aa17.53■□□□□ 0.4
TPM1-232ENST00000561425 CADM1Q9BY67 442 aaKnown RBP17.53■□□□□ 0.4
TPM1-232ENST00000561425 SAP30LQ9HAJ7 183 aa17.53■□□□□ 0.4
TPM1-232ENST00000561425 MSL2Q9HCI7 577 aa17.53■□□□□ 0.4
TPM1-232ENST00000561425 POMPQ9Y244 141 aa17.53■□□□□ 0.4
TPM1-232ENST00000561425 POLR1DQ9Y2S0 133 aa17.53■□□□□ 0.4
TPM1-232ENST00000561425 CACNG2Q9Y698 323 aa17.53■□□□□ 0.4
TPM1-232ENST00000561425 PPIHO43447 177 aaKnown RBP17.52■□□□□ 0.4
TPM1-232ENST00000561425 THBS2P35442 1172 aa17.52■□□□□ 0.4
TPM1-232ENST00000561425 SPRNQ5BIV9 151 aa17.52■□□□□ 0.4
TPM1-232ENST00000561425 ASRGL1Q7L266 308 aa17.52■□□□□ 0.4
TPM1-232ENST00000561425 LINC00346Q8IVM7 164 aa17.52■□□□□ 0.4
TPM1-232ENST00000561425 ELMOD3Q96FG2 381 aa17.52■□□□□ 0.4
TPM1-232ENST00000561425 MMADHCQ9H3L0 296 aaPredicted RBP17.52■□□□□ 0.4
TPM1-232ENST00000561425 TBC1D23Q9NUY8 699 aa17.52■□□□□ 0.4
TPM1-232ENST00000561425 ARMC1Q9NVT9 282 aa17.52■□□□□ 0.4
TPM1-232ENST00000561425 A0A1B0GWJ7 208 aa17.51■□□□□ 0.39
TPM1-232ENST00000561425 B4DSR2 109 aa17.51■□□□□ 0.39
TPM1-232ENST00000561425 TIMM8AO60220 97 aaPredicted RBP17.51■□□□□ 0.39
TPM1-232ENST00000561425 ACSM4P0C7M7 580 aa17.51■□□□□ 0.39
TPM1-232ENST00000561425 PYCR1P32322 319 aa17.51■□□□□ 0.39
TPM1-232ENST00000561425 ERFP50548 548 aa17.51■□□□□ 0.39
TPM1-232ENST00000561425 DVL1P1P54792 670 aaPredicted RBP17.51■□□□□ 0.39
TPM1-232ENST00000561425 CRMP1Q14194 572 aa17.51■□□□□ 0.39
TPM1-232ENST00000561425 TEX30Q5JUR7 227 aa17.51■□□□□ 0.39
TPM1-232ENST00000561425 FAM120AOSQ5T036 256 aa17.51■□□□□ 0.39
TPM1-232ENST00000561425 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.51■□□□□ 0.39
TPM1-232ENST00000561425 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.51■□□□□ 0.39
TPM1-232ENST00000561425 OR5L1Q8NGL2 311 aa17.51■□□□□ 0.39
TPM1-232ENST00000561425 OR10S1Q8NGN2 331 aa17.51■□□□□ 0.39
TPM1-232ENST00000561425 OR2AJ1Q8NGZ0 328 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms