RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	DVL2	O14641	736 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	DHH	O43323	396 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	TMCC2	O75069	709 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	ZNF254	O75437	659 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	RPP14	O95059	124 aa	Known RBP	6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	ZFPL1	O95159	310 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	CLEC2L	P0C7M8	214 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	EDN3	P14138	238 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	MSR1	P21757	451 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	CDA	P32320	146 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	NTF4	P34130	210 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	OPRL1	P41146	370 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	KIR3DL2	P43630	455 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	RORC	P51449	518 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	ZNF84	P51523	738 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	RIDA	P52758	137 aa	Known RBP	6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	RPS11	P62280	158 aa	Known RBP eCLIP	6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	LSM6	P62312	80 aa	Known RBP	6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	DYNC1I2	Q13409	638 aa	Known RBP	6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	ALKBH1	Q13686	389 aa	Known RBP	6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	ZNF169	Q14929	603 aa	Predicted RBP	6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	C3AR1	Q16581	482 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	ACSM3	Q53FZ2	586 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	YIF1B	Q5BJH7	314 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	OR7E24	Q6IFN5	339 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	DEGS2	Q6QHC5	323 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	PAMR1	Q6UXH9	720 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	SPATC1	Q76KD6	591 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	AAED1	Q7RTV5	226 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	CEACAM19	Q7Z692	300 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	KRT77	Q7Z794	578 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	SIAH3	Q8IW03	269 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	PRSS35	Q8N3Z0	413 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	OR6Q1	Q8NGQ2	317 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	OR13C5	Q8NGS8	318 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	OR2G2	Q8NGZ5	317 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	RNF133	Q8WVZ7	376 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	ITLN2	Q8WWU7	325 aa	Predicted RBP	6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	RGP1	Q92546	391 aa	Predicted RBP	6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	NABP1	Q96AH0	204 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	ZNF775	Q96BV0	537 aa	Predicted RBP	6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	SLAMF6	Q96DU3	332 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	WDYHV1	Q96HA8	205 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	PDCD1LG2	Q9BQ51	273 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	MRO	Q9BYG7	248 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	ULBP2	Q9BZM5	246 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	MMP27	Q9H306	513 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	NELFA	Q9H3P2	528 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	EXO5	Q9H790	373 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	SEC61A2	Q9H9S3	476 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	RNF122	Q9H9V4	155 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	EMC7	Q9NPA0	242 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	AKIP1	Q9NQ31	210 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	SNTG1	Q9NSN8	517 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	EMC3	Q9P0I2	261 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	FRRS1L	Q9P0K9	344 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	GDF2	Q9UK05	429 aa	Predicted RBP	6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	POLR1D	Q9Y2S0	133 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	ZNF281	Q9Y2X9	895 aa		6.62	□□□□□ -1.35
TPM1-231	ENST00000561395	GTF3C1	Q12789	2109 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395		A0A075B6Q4	140 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395		A0A1B0GTH9	108 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395		A0A1B0GVC2	190 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	IQCM	A0A1B0GVH7	501 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	SHISA3	A0PJX4	238 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	TMEM212	A6NML5	194 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	ZNF724	A8MTY0	619 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	AQP7	O14520	342 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	CASK	O14936	926 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	SRSF10	O75494	262 aa	Known RBP	6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	GATB	O75879	557 aa	Known RBP	6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	UCHL1	P09936	223 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	H2BFM	P0C1H6	154 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	CD99	P14209	185 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	CALR	P27797	417 aa	Known RBP	6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	MTNR1B	P49286	362 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	CCR9	P51686	369 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	MRPS34	P82930	218 aa	Known RBP	6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	MXD1	Q05195	221 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	MFGE8	Q08431	387 aa	Predicted RBP	6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	HNRNPA0	Q13151	305 aa	Known RBP	6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	ENDOG	Q14249	297 aa	Known RBP	6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	RNPS1	Q15287	305 aa	Known RBP	6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	ZMAT1	Q5H9K5	638 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	WDR38	Q5JTN6	314 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	FAM27D1	Q5T7N8	215 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	RIPPLY2	Q5TAB7	128 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	ZNF544	Q6NX49	715 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	CORO6	Q6QEF8	472 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	UNQ9370/PRO34162	Q6UXP9	181 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	CFAP77	Q6ZQR2	320 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395		Q6ZS92	163 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	LINGO2	Q7L985	606 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	CATSPERD	Q86XM0	798 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	GPR137C	Q8N3F9	429 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	MFSD4A	Q8N468	514 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	OR10S1	Q8NGN2	331 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	OR5AK2	Q8NH90	309 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	FNDC9	Q8TBE3	224 aa		6.61	□□□□□ -1.35
TPM1-231	ENST00000561395	PHYHIP	Q92561	330 aa		6.61	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms