RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 MELKQ14680 651 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 METAP1DQ6UB28 335 aaPredicted RBP7.8□□□□□ -1.16
HERC1-210ENST00000560897 ADAMTSL5Q6ZMM2 481 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 BTN2A1Q7KYR7 527 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 OR5AS1Q8N127 324 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 OR8J2Q8NGG1 315 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 OR51G2Q8NGK0 314 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 OR13G1Q8NGZ3 307 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 OR5J2Q8NH18 312 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 MCHR2Q969V1 340 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 COG8Q96MW5 612 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 SORT1Q99523 831 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 MEAF6Q9HAF1 191 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 SLCO1B3Q9NPD5 702 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 MRGBPQ9NV56 204 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 FGFR1OP2Q9NVK5 253 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 IFT52Q9Y366 437 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 IGKV1D-42A0A075B6H8 117 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 MCIDASD6RGH6 385 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 UBDO15205 165 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 ALDOBP05062 364 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 PGA4P0DJD7 388 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 PGA3P0DJD8 388 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 G6PDP11413 515 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 SAA4P35542 130 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 DGCR2P98153 550 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 PSG4Q00888 419 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 EMX2Q04743 252 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 SF3A3Q12874 501 aaKnown RBP eCLIP7.79□□□□□ -1.16
HERC1-210ENST00000560897 OR8B8Q15620 311 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 SGCAQ16586 387 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 LRRC75BQ2VPJ9 315 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 C11orf91Q3C1V1 193 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 NKAPLQ5M9Q1 402 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 C6orf136Q5SQH8 315 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 INTS11Q5TA45 600 aaKnown RBP7.79□□□□□ -1.16
HERC1-210ENST00000560897 HDDC2Q7Z4H3 204 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 COMTD1Q86VU5 262 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 BEND2Q8NDZ0 799 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 C19orf18Q8NEA5 215 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 ST8SIA4Q92187 359 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 SLC35B4Q969S0 331 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 ZNF583Q96ND8 569 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 MOGAT1Q96PD6 335 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 DDOQ99489 341 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 MCRIP2Q9BUT9 160 aaKnown RBP7.79□□□□□ -1.16
HERC1-210ENST00000560897 OR2H1Q9GZK4 316 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 C20orf27Q9GZN8 174 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 RABEP2Q9H5N1 569 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 CCDC134Q9H6E4 229 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 AKTIPQ9H8T0 292 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 TRIM36Q9NQ86 728 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 FAM53CQ9NYF3 392 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 CTSZQ9UBR2 303 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 DNAJB11Q9UBS4 358 aa7.79□□□□□ -1.16
HERC1-210ENST00000560897 STARD9Q9P2P6 4700 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 A0A1B0GWA3 101 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 NDUFA2O43678 99 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 MT-ATP6P00846 226 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 THY1P04216 161 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 BCHEP06276 602 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 IDO1P14902 403 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 GUCA1AP43080 201 aaPredicted RBP7.78□□□□□ -1.16
HERC1-210ENST00000560897 RGS6P49758 472 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 PCBD1P61457 104 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 MRPS34P82930 218 aaKnown RBP7.78□□□□□ -1.16
HERC1-210ENST00000560897 UGT3A2Q3SY77 523 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 FAM91A1Q658Y4 838 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 ULK3Q6PHR2 472 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 EPGNQ6UW88 154 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 NHLRC1Q6VVB1 395 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 BOLLQ8N9W6 283 aaKnown RBP7.78□□□□□ -1.16
HERC1-210ENST00000560897 NOXO1Q8NFA2 376 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 PTP4A1Q93096 173 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 ERGIC1Q969X5 290 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 HAVCR1Q96D42 359 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 ZNF582Q96NG8 517 aaPredicted RBP7.78□□□□□ -1.16
HERC1-210ENST00000560897 CCDC115Q96NT0 180 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 RCHY1Q96PM5 261 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 OR5M11Q96RB7 305 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 ZNF347Q96SE7 839 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 ELAC2Q9BQ52 826 aaKnown RBP7.78□□□□□ -1.16
HERC1-210ENST00000560897 CCDC28BQ9BUN5 200 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 PCDHAC1Q9H158 963 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 WDR55Q9H6Y2 383 aaPredicted RBP7.78□□□□□ -1.16
HERC1-210ENST00000560897 NANSQ9NR45 359 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 SERTAD4Q9NUC0 356 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 HAO1Q9UJM8 370 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 TIMM10BQ9Y5J6 103 aa7.78□□□□□ -1.16
HERC1-210ENST00000560897 RYR1P21817 5038 aa7.77□□□□□ -1.17
HERC1-210ENST00000560897 TRAV38-1A0A0B4J264 116 aa7.77□□□□□ -1.17
HERC1-210ENST00000560897 TCRBV4S1A1TA0A5B7 111 aa7.77□□□□□ -1.17
HERC1-210ENST00000560897 LRRN3E7EW58 273 aa7.77□□□□□ -1.17
HERC1-210ENST00000560897 F5H5P2 479 aa7.77□□□□□ -1.17
HERC1-210ENST00000560897 CCDC22O60826 627 aa7.77□□□□□ -1.17
HERC1-210ENST00000560897 RAMP3O60896 148 aa7.77□□□□□ -1.17
HERC1-210ENST00000560897 KRT75O95678 551 aa7.77□□□□□ -1.17
HERC1-210ENST00000560897 CCDC159P0C7I6 412 aa7.77□□□□□ -1.17
HERC1-210ENST00000560897 NR2C1P13056 603 aa7.77□□□□□ -1.17
HERC1-210ENST00000560897 ETFAP13804 333 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms