RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 OR13G1Q8NGZ3 307 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 TCEAL3Q969E4 200 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 DCPSQ96C86 337 aaKnown RBP2.05□□□□□ -2.08
PSMA4-221ENST00000560842 HSD17B10Q99714 261 aaKnown RBP2.05□□□□□ -2.08
PSMA4-221ENST00000560842 TBL1YQ9BQ87 522 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 ANKRD60Q9BZ19 345 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 SLC38A10Q9HBR0 1119 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 HRASLS2Q9NWW9 162 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 CBY1Q9Y3M2 126 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 COL5A1P20908 1838 aaPredicted RBP2.05□□□□□ -2.08
PSMA4-221ENST00000560842 IGHV3-72A0A0B4J1Y9 119 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 VGLL3A8MV65 326 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 NDUFAB1O14561 156 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 CLOCKO15516 846 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 FKBP6O75344 327 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 SLC22A5O76082 557 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 IGHDP01880 384 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 IGKV4-1P06312 121 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 ACSM4P0C7M7 580 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 ERGP11308 486 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 ME2P23368 584 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 LOXP28300 417 aaPredicted RBP2.04□□□□□ -2.08
PSMA4-221ENST00000560842 TAS2R31P59538 309 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 STXBP1P61764 594 aaKnown RBP2.04□□□□□ -2.08
PSMA4-221ENST00000560842 CDK5Q00535 292 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 NID2Q14112 1375 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 GPR107Q5VW38 600 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 NANOGNBQ7Z5D8 188 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 FAM228AQ86W67 206 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 OR5B3Q8NH48 314 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 ELMO1Q92556 727 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 TMEM230Q96A57 120 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 TPD52L3Q96J77 140 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 OR5B12Q96R08 314 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 RBBP8Q99708 897 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 MICU1Q9BPX6 476 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 CRCT1Q9UGL9 99 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 ENOPH1Q9UHY7 261 aa2.04□□□□□ -2.08
PSMA4-221ENST00000560842 TRMT112Q9UI30 125 aaKnown RBP2.04□□□□□ -2.08
PSMA4-221ENST00000560842 SCN4AP35499 1836 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 FHOD3Q2V2M9 1422 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 A0A0J9YXV3 536 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 H7C417 338 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 L7N2F9 121 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 SIRPB1O00241 398 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 AIM2O14862 343 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 SCAMP2O15127 329 aaKnown RBP2.03□□□□□ -2.08
PSMA4-221ENST00000560842 CHST10O43529 356 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 CLDN11O75508 207 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 GLSO94925 669 aaPredicted RBP2.03□□□□□ -2.08
PSMA4-221ENST00000560842 IGLV3-25P01717 112 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 HLA-DQB1P01920 261 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 ANXA5P08758 320 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 ZNF24P17028 368 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 GGT1P19440 569 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 SLC1A1P43005 524 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 IFT88Q13099 833 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 XKR7Q5GH72 579 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 C9orf135Q5VTT2 229 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 ADNP2Q6IQ32 1131 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 TMEM256Q8N2U0 113 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 SLC35G3Q8N808 338 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 TMEM105Q8N8V8 129 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 CHST4Q8NCG5 386 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 APCDD1LQ8NCL9 501 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 SHC3Q92529 594 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 COL21A1Q96P44 957 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 RSG1Q9BU20 258 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 SAMSN1Q9NSI8 373 aaKnown RBP2.03□□□□□ -2.08
PSMA4-221ENST00000560842 MTFP1Q9UDX5 166 aa2.03□□□□□ -2.08
PSMA4-221ENST00000560842 TRBV9A0A0B4J1U6 114 aa2.02□□□□□ -2.09
PSMA4-221ENST00000560842 TRBV11-1A0A0K0K1C0 115 aa2.02□□□□□ -2.09
PSMA4-221ENST00000560842 KRBOX1C9JBD0 128 aa2.02□□□□□ -2.09
PSMA4-221ENST00000560842 K7EMT4 169 aa2.02□□□□□ -2.09
PSMA4-221ENST00000560842 EIF4E2O60573 245 aaKnown RBP2.02□□□□□ -2.09
PSMA4-221ENST00000560842 IGHV3-11P01762 117 aa2.02□□□□□ -2.09
PSMA4-221ENST00000560842 EIF4EP06730 217 aaKnown RBP2.02□□□□□ -2.09
PSMA4-221ENST00000560842 UQCRFS1P1P0C7P4 283 aa2.02□□□□□ -2.09
PSMA4-221ENST00000560842 U2AF2P26368 475 aaKnown RBP eCLIP2.02□□□□□ -2.09
PSMA4-221ENST00000560842 CD34P28906 385 aa2.02□□□□□ -2.09
PSMA4-221ENST00000560842 CDKN2DP55273 166 aa2.02□□□□□ -2.09
PSMA4-221ENST00000560842 RAB10P61026 200 aa2.02□□□□□ -2.09
PSMA4-221ENST00000560842 SP4Q02446 784 aa2.02□□□□□ -2.09
PSMA4-221ENST00000560842 SOHLH1Q5JUK2 328 aa2.02□□□□□ -2.09
PSMA4-221ENST00000560842 SLC22A9Q8IVM8 553 aa2.02□□□□□ -2.09
PSMA4-221ENST00000560842 GTPBP8Q8N3Z3 284 aaPredicted RBP2.02□□□□□ -2.09
PSMA4-221ENST00000560842 LRRC52Q8N7C0 313 aa2.02□□□□□ -2.09
PSMA4-221ENST00000560842 RAB3IL1Q8TBN0 382 aa2.02□□□□□ -2.09
PSMA4-221ENST00000560842 KLF14Q8TD94 323 aaPredicted RBP2.02□□□□□ -2.09
PSMA4-221ENST00000560842 GGTLC1Q9BX51 225 aa2.02□□□□□ -2.09
PSMA4-221ENST00000560842 EDA2RQ9HAV5 297 aa2.02□□□□□ -2.09
PSMA4-221ENST00000560842 TMEM165Q9HC07 324 aa2.02□□□□□ -2.09
PSMA4-221ENST00000560842 FBXO6Q9NRD1 293 aaPredicted RBP2.02□□□□□ -2.09
PSMA4-221ENST00000560842 MTCH1Q9NZJ7 389 aa2.02□□□□□ -2.09
PSMA4-221ENST00000560842 CCDC59Q9P031 241 aaKnown RBP2.02□□□□□ -2.09
PSMA4-221ENST00000560842 TRAV19A0A0A6YYK7 116 aa2.01□□□□□ -2.09
PSMA4-221ENST00000560842 HEATR9A2RTY3 570 aa2.01□□□□□ -2.09
PSMA4-221ENST00000560842 XKRY2A2RUG3 117 aa2.01□□□□□ -2.09
PSMA4-221ENST00000560842 A6NDN8 102 aa2.01□□□□□ -2.09
PSMA4-221ENST00000560842 NCBP2LA6PVI3 153 aaKnown RBP2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms